RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 ALOX15P16050 662 aaPredicted RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 HSPA6P17066 643 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 ACO1P21399 889 aaKnown RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 XPAP23025 273 aaPredicted RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 ADSLP30566 484 aaPredicted RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 CRHR1P34998 444 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 BPIFB4P59827 614 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 RAC3P60763 192 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 NKX6-1P78426 367 aaPredicted RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 TLE1Q04724 770 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 FOXE3Q13461 319 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 NOMO1Q15155 1222 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 PGS1Q32NB8 556 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 MFSD14BQ5SR56 506 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 PRAMEF14Q5SWL7 426 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 ZNF572Q7Z3I7 529 aaPredicted RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 ZFPM1Q8IX07 1006 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 ANKRD53Q8N9V6 530 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 ABCF1Q8NE71 845 aaKnown RBP eCLIP3□□□□□ -1.93
ITGB1-213ENST00000484088 CHST13Q8NET6 341 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 ZNF480Q8WV37 535 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 RABGGTAQ92696 567 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 LPPQ93052 612 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 PAWRQ96IZ0 340 aaKnown RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 ADOQ96SZ5 270 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 ADI1Q9BV57 179 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 TMEM60Q9H2L4 133 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 ATP6V0A4Q9HBG4 840 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 PLA2G3Q9NZ20 509 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 SH3BP1Q9Y3L3 701 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 NR2E1Q9Y466 385 aa3□□□□□ -1.93
ITGB1-213ENST00000484088 CFAP20Q9Y6A4 193 aaKnown RBP3□□□□□ -1.93
ITGB1-213ENST00000484088 PNPLA7Q6ZV29 1317 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 PRSS29PA6NIE9 313 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 FAM171A2A8MVW0 826 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 NPIPB8E9PQR5 432 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 TPP1O14773 563 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 CDC14BO60729 498 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 JUNP05412 331 aaKnown RBP2.99□□□□□ -1.93
ITGB1-213ENST00000484088 SLC5A1P13866 664 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 TRIM27P14373 513 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 RHCEP18577 417 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 COMTP21964 271 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 SLC6A4P31645 630 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 MSX2P35548 267 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-213ENST00000484088 CASRP41180 1078 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 MEOX1P50221 254 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 HK3P52790 923 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 SLC16A1P53985 500 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 ZNF280AP59817 542 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-213ENST00000484088 CDC42EP1Q00587 391 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 RHDQ02161 417 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 COL10A1Q03692 680 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 USP39Q53GS9 565 aaKnown RBP2.99□□□□□ -1.93
ITGB1-213ENST00000484088 ZMAT1Q5H9K5 638 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 NOL8Q76FK4 1167 aaKnown RBP2.99□□□□□ -1.93
ITGB1-213ENST00000484088 DENND1CQ8IV53 801 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 GRAMD1CQ8IYS0 662 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 CMTM4Q8IZR5 234 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 PQLC1Q8N2U9 271 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 FBXO18Q8NFZ0 1043 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 HDAC10Q969S8 669 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 C1GALT1C1Q96EU7 318 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 RPL10LQ96L21 214 aaKnown RBP2.99□□□□□ -1.93
ITGB1-213ENST00000484088 NT5C1BQ96P26 610 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 FAM193BQ96PV7 902 aaPredicted RBP2.99□□□□□ -1.93
ITGB1-213ENST00000484088 UIMC1Q96RL1 719 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 MAP3K14Q99558 947 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 CGRRF1Q99675 332 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 VPS11Q9H270 941 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 DEF6Q9H4E7 631 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 LDAHQ9H6V9 325 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 C1orf112Q9NSG2 853 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 L1RE1Q9UN81 338 aa2.99□□□□□ -1.93
ITGB1-213ENST00000484088 A0A088AWK7 358 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 GOLGA6CA6NDK9 693 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 GOLGA6BA6NDN3 693 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 CTNND1O60716 968 aaKnown RBP2.98□□□□□ -1.93
ITGB1-213ENST00000484088 PHF2O75151 1096 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 ENDOD1O94919 500 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 ZBED1O96006 694 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 GASTP01350 101 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 SBK3P0C264 359 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 CT47B1P0C2W7 299 aaPredicted RBP2.98□□□□□ -1.93
ITGB1-213ENST00000484088 GOLGA6DP0CG33 693 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 U2AF1L5P0DN76 240 aaPredicted RBP2.98□□□□□ -1.93
ITGB1-213ENST00000484088 GYPEP15421 78 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 NR4A1P22736 598 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 HTR1BP28222 390 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 ECHS1P30084 290 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 RABGGTBP53611 331 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 U2AF1Q01081 240 aaKnown RBP eCLIP2.98□□□□□ -1.93
ITGB1-213ENST00000484088 NOGQ13253 232 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 MRPL49Q13405 166 aaKnown RBP2.98□□□□□ -1.93
ITGB1-213ENST00000484088 SNAPC2Q13487 334 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 RIN1Q13671 783 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 FAM214AQ32MH5 1076 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 FLYWCH1Q4VC44 716 aa2.98□□□□□ -1.93
ITGB1-213ENST00000484088 ANKS6Q68DC2 871 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms