RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 STAMQ92783 540 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 DHX58Q96C10 678 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 MSLNLQ96KJ4 702 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 EMILIN2Q9BXX0 1053 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 MRPL44Q9H9J2 332 aaKnown RBP13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 HCFC2Q9Y5Z7 792 aa13.8□□□□□ -0.2
PPP1R3F-204ENST00000471261 SMIM28A0A1B0GU29 152 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 MBTPS2O43462 519 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 KIF4AO95239 1232 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 BRD1O95696 1058 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 SCP2P22307 547 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 GLUD2P49448 558 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 MCL1Q07820 350 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 COASYQ13057 564 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 HERC4Q5GLZ8 1057 aaPredicted RBP13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 AXDND1Q5T1B0 1012 aaPredicted RBP13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 SMRP1Q8NCR6 262 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 CASP10Q92851 521 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 SNX27Q96L92 541 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 PPP1R10Q96QC0 940 aaKnown RBP13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 HERC2P3Q9BVR0 1158 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 GPR62Q9BZJ7 368 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 GOLGA2P5Q9HBQ8 144 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 PCDHA7Q9UN72 937 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 ZDHHC9Q9Y397 364 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 IRAK3Q9Y616 596 aa13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 SF3B1O75533 1304 aaKnown RBP eCLIP13.79□□□□□ -0.2
PPP1R3F-204ENST00000471261 B3GAT3O94766 335 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 CNPP09543 421 aaKnown RBP13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 EPCAMP16422 314 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 GAP43P17677 238 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 ABCD1P33897 745 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 CLCNKBP51801 687 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 GTF2BQ00403 316 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 KCNC3Q14003 757 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 NAB2Q15742 525 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 SMAD2Q15796 467 aaKnown RBP13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 USP41Q3LFD5 358 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 ANKRD54Q6NXT1 300 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 ALKAL1Q6UXT8 129 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 TMEM184AQ6ZMB5 413 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 CEP57Q86XR8 500 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 IQUBQ8NA54 791 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 DNAJC19Q96DA6 116 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 CHAMP1Q96JM3 812 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 FIZ1Q96SL8 496 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 MSTO1Q9BUK6 570 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 HAPLN2Q9GZV7 340 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 PANK4Q9NVE7 773 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 FAM13BQ9NYF5 915 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 SEL1LQ9UBV2 794 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 SSX2IPQ9Y2D8 614 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 USP15Q9Y4E8 981 aaPredicted RBP13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 MYH11P35749 1972 aa13.78□□□□□ -0.2
PPP1R3F-204ENST00000471261 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 BDP1A6H8Y1 2624 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 TDRD15B5MCY1 1934 aaKnown RBP13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 TULP1O00294 542 aaPredicted RBP13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 POLR2DO15514 142 aaKnown RBP13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 GCNT3O95395 438 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 CLTAP09496 248 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 CXCL8P10145 99 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 KRT85P78386 507 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 E2F4Q16254 413 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 TPRNQ4KMQ1 711 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 ZNF720Q7Z2F6 126 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 PPFIBP1Q86W92 1011 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 MAP4K3Q8IVH8 894 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 GLYCTKQ8IVS8 523 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 GJD3Q8N144 294 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 RIN2Q8WYP3 895 aaPredicted RBP13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 C18orf25Q96B23 403 aaPredicted RBP13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 SPATA32Q96LK8 384 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 UROC1Q96N76 676 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 ZMAT2Q96NC0 199 aaKnown RBP13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 KLHL5Q96PQ7 755 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 LRRC27Q9C0I9 530 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 TNMDQ9H2S6 317 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 CUEDC2Q9H467 287 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 CNTN3Q9P232 1028 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 RCOR1Q9UKL0 485 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 ATP6V1DQ9Y5K8 247 aa13.77□□□□□ -0.21
PPP1R3F-204ENST00000471261 MYH15Q9Y2K3 1946 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 TISP43B9A030 160 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 TEX28O15482 410 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 MEFVO15553 781 aaPredicted RBP13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 LILRB3O75022 631 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 PIGRP01833 764 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 ADH1AP07327 375 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 MYBP10242 640 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 HOXB8P17481 243 aaPredicted RBP13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 TNFSF9P41273 254 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 ASIC1P78348 528 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 AMPD3Q01432 767 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 DSG1Q02413 1049 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 SOX4Q06945 474 aaPredicted RBP13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 SPAG1Q07617 926 aa13.76□□□□□ -0.21
PPP1R3F-204ENST00000471261 KYAT1Q16773 422 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms