RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 MFSD5Q6N075 450 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 RNF207Q6ZRF8 634 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 CCDC25Q86WR0 208 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 RIT2Q99578 217 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 MXRA8Q9BRK3 442 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 STMN4Q9H169 189 aaPredicted RBP19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 PKD2L1Q9P0L9 805 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 USP20Q9Y2K6 914 aa19.66■□□□□ 0.74
PCDHA1-202ENST00000394633 MGRN1O60291 552 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 ADRB2P07550 413 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 VIMP08670 466 aaKnown RBP19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 MIER3Q7Z3K6 550 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 EXOC3L1Q86VI1 746 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 ZNF653Q96CK0 615 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 CCDC113Q9H0I3 377 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 SAMD15Q9P1V8 674 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 SLC12A4Q9UP95 1085 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 TMX2Q9Y320 296 aa19.65■□□□□ 0.74
PCDHA1-202ENST00000394633 TP73O15350 636 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 GSTA1P08263 222 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 ITGB5P18084 799 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 ELF3P78545 371 aaPredicted RBP19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 GPR162Q16538 588 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 NSMFQ6X4W1 530 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 PPM1KQ8N3J5 372 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 PSPC1Q8WXF1 523 aaKnown RBP19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 SEMA4DQ92854 862 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 DDX23Q9BUQ8 820 aaKnown RBP19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 LRRC19Q9H756 370 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 AAASQ9NRG9 546 aa19.64■□□□□ 0.74
PCDHA1-202ENST00000394633 ECEL1O95672 775 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 PLS3P13797 630 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 RWDD2BP57060 319 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 MKRN4PQ13434 485 aaPredicted RBP19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 MAGEC3Q8TD91 643 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 SHC3Q92529 594 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 SCLT1Q96NL6 688 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 ROPN1BQ9BZX4 212 aaPredicted RBP19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 CDC42EP4Q9H3Q1 356 aaKnown RBP19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 ROPN1Q9HAT0 212 aaPredicted RBP19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 MCM8Q9UJA3 840 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 GTF3C4Q9UKN8 822 aa19.64■□□□□ 0.73
PCDHA1-202ENST00000394633 GOLGA8IPA6NC78 632 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 GOLGA8JA6NMD2 632 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 MAPK13O15264 365 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 PMM2O15305 246 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 DLATP10515 647 aaKnown RBP19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 RARRES1P49788 294 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 MAP2K1Q02750 393 aaPredicted RBP19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 LLGL1Q15334 1064 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 PPP1R7Q15435 360 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 LONRF1Q17RB8 773 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 SAMD1Q6SPF0 538 aaPredicted RBP19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 TRMT10CQ7L0Y3 403 aaKnown RBP19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 TAOK1Q7L7X3 1001 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 ZHX2Q9Y6X8 837 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 LOC102724159A0A0B4J2E5 919 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 CLDN3O15551 220 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 P4HBP07237 508 aaKnown RBP19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 GTF2BQ00403 316 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 PWP2Q15269 919 aaKnown RBP19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 HAUS6Q7Z4H7 955 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 C1orf54Q8WWF1 131 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 CXorf56Q9H5V9 222 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 UVRAGQ9P2Y5 699 aa19.63■□□□□ 0.73
PCDHA1-202ENST00000394633 SSC5DA1L4H1 1573 aa19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 CYP11B1P15538 503 aa19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 KRT17Q04695 432 aa19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 CALCOCO2Q13137 446 aa19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 ZYXQ15942 572 aaKnown RBP19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 HIBCHQ6NVY1 386 aaPredicted RBP19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 TRPM8Q7Z2W7 1104 aa19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 CHURC1Q8WUH1 139 aa19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 SH2D3AQ9BRG2 576 aa19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 NSRP1Q9H0G5 558 aaKnown RBP19.62■□□□□ 0.73
PCDHA1-202ENST00000394633 FSCN2O14926 492 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 DHX15O43143 795 aaKnown RBP19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 MFAP3P55082 362 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 CDR2Q01850 454 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 RHBDF2Q6PJF5 856 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 LDHDQ86WU2 507 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 CEP57Q86XR8 500 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 SLCO2A1Q92959 643 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 KCNH7Q9NS40 1196 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 ABCF3Q9NUQ8 709 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 WHRNQ9P202 907 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 SLC16A4O15374 487 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 ACSL3O95573 720 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 OAS1P00973 400 aaKnown RBP19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 CREB1P16220 341 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 CHKAP35790 457 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 SNX1Q13596 522 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 NEDD9Q14511 834 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 LRRC14Q15048 493 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 OTUD6AQ7L8S5 288 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 CBWD2Q8IUF1 395 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 APOBEC3FQ8IUX4 373 aaKnown RBP19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 HELQQ8TDG4 1101 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 FBXO28Q9NVF7 368 aa19.61■□□□□ 0.73
PCDHA1-202ENST00000394633 TMEM150BA6NC51 233 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms