RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	YNL320W	P42840	284 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	CPR7	P47103	393 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	COG7	P53195	279 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	MPA43	P53583	542 aa	Predicted RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	YMR027W	Q04371	470 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	DPP1	Q05521	289 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	AKR2	Q12013	749 aa		5.22	□□□□□ -1.57
TFB4	YPR056W	FOL3	Q12676	427 aa	Predicted RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	EFG1	Q3E705	233 aa	Known RBP	5.22	□□□□□ -1.57
TFB4	YPR056W	SPS100	P13130	326 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	YCR100C	P25606	316 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	INO2	P26798	304 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	FRE2	P36033	711 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	MST28	P39552	234 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	RMD6	P39975	231 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	MCM22	P47167	239 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	ATP23	P53722	227 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	YMD8	Q03697	442 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	CCE1	Q03702	353 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	TPO3	Q06451	622 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	ERV2	Q12284	196 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	TFC7	Q12415	435 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	MRX4	Q12467	430 aa		5.21	□□□□□ -1.58
TFB4	YPR056W	COX5A	P00424	153 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	AQY1	P0CD91	305 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	RPL4A	P10664	362 aa	Known RBP	5.2	□□□□□ -1.58
TFB4	YPR056W	CPR4	P25334	318 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	YCR023C	P25351	611 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	MDM31	P38880	579 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	EXO1	P39875	702 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	RRG9	P40156	214 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	PDS1	P40316	373 aa	Predicted RBP	5.2	□□□□□ -1.58
TFB4	YPR056W	YIL029C	P40538	142 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	AZF1	P41696	914 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	RPL4B	P49626	362 aa	Known RBP	5.2	□□□□□ -1.58
TFB4	YPR056W	IMD3	P50095	523 aa	Known RBP	5.2	□□□□□ -1.58
TFB4	YPR056W	NUP100	Q02629	959 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	HNT1	Q04344	158 aa	Known RBP	5.2	□□□□□ -1.58
TFB4	YPR056W	SWF1	Q04629	336 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	TAF9	Q05027	157 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	YPR091C	Q06833	770 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	YOL024W	Q08172	172 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	IGO2	Q9P305	131 aa		5.2	□□□□□ -1.58
TFB4	YPR056W	BI2	P03873	423 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	CMD1	P06787	147 aa	Known RBP	5.19	□□□□□ -1.58
TFB4	YPR056W	MET2	P08465	486 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	EPT1	P22140	391 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	TIP1	P27654	210 aa	Predicted RBP	5.19	□□□□□ -1.58
TFB4	YPR056W	SEC1	P30619	724 aa	Known RBP	5.19	□□□□□ -1.58
TFB4	YPR056W	MED8	P38304	223 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	ARN1	P38731	627 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	TPN1	P53099	579 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	YGL039W	P53183	348 aa	Known RBP	5.19	□□□□□ -1.58
TFB4	YPR056W	SYF2	P53277	215 aa	Predicted RBP	5.19	□□□□□ -1.58
TFB4	YPR056W	SWS2	P53937	143 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	CSN9	Q03981	162 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	PEX30	Q06169	523 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	YLR030W	Q07967	263 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	COQ10	Q08058	207 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	TIM18	Q08749	192 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	PEX11	Q12462	236 aa		5.19	□□□□□ -1.58
TFB4	YPR056W	KIN28	P06242	306 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	MRS1	P07266	363 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	GCN3	P14741	305 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	MCK1	P21965	375 aa	Known RBP	5.18	□□□□□ -1.58
TFB4	YPR056W	ARO7	P32178	256 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	PDC2	P32896	925 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	RPS1A	P33442	255 aa	Known RBP	5.18	□□□□□ -1.58
TFB4	YPR056W	TRM7	P38238	310 aa	Known RBP	5.18	□□□□□ -1.58
TFB4	YPR056W	SLM6	P38343	150 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	PRS3	P38689	320 aa	Known RBP	5.18	□□□□□ -1.58
TFB4	YPR056W	EFM1	P38732	585 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	IPI1	P38803	334 aa	Predicted RBP	5.18	□□□□□ -1.58
TFB4	YPR056W	SER33	P40510	469 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	MOB2	P43563	287 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	BXI1	P48558	297 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	TOS8	P53147	276 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	SWP1	Q02795	286 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	PKR1	Q03880	122 aa	Known RBP	5.18	□□□□□ -1.58
TFB4	YPR056W	YET2	Q04210	160 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	HCR1	Q05775	265 aa	Known RBP	5.18	□□□□□ -1.58
TFB4	YPR056W	RFM1	Q12192	310 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	RAX2	Q12465	1220 aa		5.18	□□□□□ -1.58
TFB4	YPR056W	CDC28	P00546	298 aa	Known RBP	5.17	□□□□□ -1.58
TFB4	YPR056W	ALK2	P32789	676 aa	Predicted RBP	5.17	□□□□□ -1.58
TFB4	YPR056W	SRY1	P36007	326 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	MTC4	P38335	694 aa	Known RBP	5.17	□□□□□ -1.58
TFB4	YPR056W	LSM4	P40070	187 aa	Known RBP	5.17	□□□□□ -1.58
TFB4	YPR056W	SNO3	P43544	222 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	YJL043W	P47053	257 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	COS1	P53822	381 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	SCS7	Q03529	384 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	BNA5	Q05979	453 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	SEI1	Q06058	285 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	YLR446W	Q06204	433 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	FRQ1	Q06389	190 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	BSP1	Q06604	576 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	DAS2	Q12084	232 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	MCT1	Q12283	360 aa		5.17	□□□□□ -1.58
TFB4	YPR056W	SUA7	P29055	345 aa	Predicted RBP	5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms