RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC8	YPR055W	VAC14	Q06708	880 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	YPL150W	Q12152	901 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	MDY2	Q12285	212 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	TY4B-J	P47024	1803 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	NUP192	P47054	1683 aa		0.46	□□□□□ -2.34
SEC8	YPR055W	TPM1	P17536	199 aa	Known RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	CAB3	P36076	571 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	YHL044W	P38727	235 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	YIA6	P40556	373 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	SLM2	P53955	656 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	CDC14	Q00684	551 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	YLL007C	Q07799	665 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	TDH1	P00360	332 aa	Known RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	PET494	P07390	489 aa	Predicted RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	TFS1	P14306	219 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	CAT2	P32796	670 aa	Known RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	RPC37	P36121	282 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	VOA1	P53262	265 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	YDL144C	Q07589	356 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	VPS68	Q12016	184 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	UTP10	P42945	1769 aa	Known RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	CFT1	Q06632	1357 aa	Known RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	MSS116	P15424	664 aa	Known RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	IFM1	P25038	676 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	RPL5	P26321	297 aa	Known RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	SPL2	P38839	148 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	SHQ1	P40486	507 aa	Predicted RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	GON7	P46984	123 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	FCF1	Q05498	189 aa	Predicted RBP	0.45	□□□□□ -2.34
SEC8	YPR055W	SIA1	Q12212	622 aa		0.45	□□□□□ -2.34
SEC8	YPR055W	GEA1	P47102	1408 aa	Predicted RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	YMR316C-A	I2HB70	103 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	GAL7	P08431	366 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	KRE6	P32486	720 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	AEP1	P32493	518 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	AGP3	P43548	558 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	MNN5	P46982	586 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	YPT32	P51996	222 aa	Known RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	LIF1	P53150	421 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	CAB4	P53332	305 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	RRG8	Q06109	277 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	MRPL23	Q12487	163 aa	Predicted RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	SNQ2	P32568	1501 aa	Known RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	TOM40	P23644	387 aa	Known RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	RRT12	P25381	491 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	VPH2	P32341	215 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	SUR2	P38992	349 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	MNN9	P39107	395 aa	Known RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	SER33	P40510	469 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	YJL027C	P47063	138 aa	Predicted RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	OST3	P48439	350 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	RSM27	P53305	110 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	YNL050C	P53952	270 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	VPS60	Q03390	229 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	YML018C	Q03730	393 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	TVP15	Q03860	143 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	YOR268C	Q08734	132 aa		0.44	□□□□□ -2.34
SEC8	YPR055W	RTC5	Q12108	567 aa	Known RBP	0.44	□□□□□ -2.34
SEC8	YPR055W	ILV1	P00927	576 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	RPS3	P05750	240 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	VMA2	P16140	517 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	PET18	P25362	215 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	ERG2	P32352	222 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	0.43	□□□□□ -2.34	RIP-Chip
SEC8	YPR055W	GCD14	P46959	383 aa	Predicted RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	COX16	P47081	118 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	NIF3	P53081	288 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	COG7	P53195	279 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	ECM18	Q04623	453 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	TAF2	P23255	1407 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	ZWF1	P11412	505 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	OSM1	P21375	501 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	SUA5	P32579	426 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	CSG2	P35206	410 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	RPC25	P35718	212 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	LSM4	P40070	187 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	CPD1	P53314	239 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	YPL077C	Q02831	240 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	YPR011C	Q12251	326 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	YEL009C-A	A0A023PZF2	135 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	ATP6	P00854	259 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	RPP0	P05317	312 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	GCD2	P12754	651 aa	Predicted RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	POF1	P25576	258 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	GCG1	P32656	232 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	HMT1	P38074	348 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	NRG2	P38082	220 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	HIS2	P38635	335 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	CDC40	P40968	455 aa	Predicted RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	YJL028W	P47062	111 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	BAT2	P47176	376 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	MDM34	P53083	459 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	EMI1	Q04406	187 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	YLR179C	Q06252	201 aa	Known RBP	0.43	□□□□□ -2.34
SEC8	YPR055W	ARV1	Q06541	321 aa		0.43	□□□□□ -2.34
SEC8	YPR055W	UGA1	P17649	471 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	SAR1	P20606	190 aa	Known RBP	0.42	□□□□□ -2.34
SEC8	YPR055W	YCR102C	P25608	368 aa		0.42	□□□□□ -2.34
SEC8	YPR055W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.42	□□□□□ -2.34	not detected
SEC8	YPR055W	YGP1	P38616	354 aa	Known RBP	0.42	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms