RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W SWT21P53873 357 aaPredicted RBP2.2□□□□□ -2.06
MRPL40YPL173W YPL039WQ03080 316 aa2.2□□□□□ -2.06
MRPL40YPL173W YDR209CQ03480 137 aa2.2□□□□□ -2.06
MRPL40YPL173W ECM11Q04110 302 aa2.2□□□□□ -2.06
MRPL40YPL173W COQ10Q08058 207 aa2.2□□□□□ -2.06
MRPL40YPL173W RFM1Q12192 310 aa2.2□□□□□ -2.06
MRPL40YPL173W ERG2P32352 222 aa2.19□□□□□ -2.06
MRPL40YPL173W BMH2P34730 273 aaKnown RBP2.19□□□□□ -2.06
MRPL40YPL173W PHO89P38361 574 aa2.19□□□□□ -2.06
MRPL40YPL173W ARN2P38724 620 aa2.19□□□□□ -2.06
MRPL40YPL173W CPR7P47103 393 aa2.19□□□□□ -2.06
MRPL40YPL173W YJR079WP47126 109 aa2.19□□□□□ -2.06
MRPL40YPL173W USE1P53146 245 aa2.19□□□□□ -2.06
MRPL40YPL173W ASI3P53983 676 aa2.19□□□□□ -2.06
MRPL40YPL173W YDR222WQ04925 415 aa2.19□□□□□ -2.06
MRPL40YPL173W DXO1Q06349 442 aa2.19□□□□□ -2.06
MRPL40YPL173W YCT1Q12235 531 aa2.19□□□□□ -2.06
MRPL40YPL173W YDL012CQ12489 107 aa2.19□□□□□ -2.06
MRPL40YPL173W YBL112CQ3E7Y4 105 aa2.19□□□□□ -2.06
MRPL40YPL173W POX1P13711 748 aa2.18□□□□□ -2.06
MRPL40YPL173W SRB4P32569 687 aa2.18□□□□□ -2.06
MRPL40YPL173W CSG2P35206 410 aa2.18□□□□□ -2.06
MRPL40YPL173W YKL075CP36083 450 aa2.18□□□□□ -2.06
MRPL40YPL173W GOS1P38736 223 aa2.18□□□□□ -2.06
MRPL40YPL173W BFR1P38934 470 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
MRPL40YPL173W RPC17P47076 161 aa2.18□□□□□ -2.06
MRPL40YPL173W YGL034CP53186 121 aa2.18□□□□□ -2.06
MRPL40YPL173W ZRG17P53735 605 aa2.18□□□□□ -2.06
MRPL40YPL173W GTO3Q04806 366 aa2.18□□□□□ -2.06
MRPL40YPL173W NNT1Q05874 261 aa2.18□□□□□ -2.06
MRPL40YPL173W YPR098CQ06089 161 aa2.18□□□□□ -2.06
MRPL40YPL173W SPO77Q06134 477 aa2.18□□□□□ -2.06
MRPL40YPL173W SGT2Q12118 346 aaKnown RBP2.18□□□□□ -2.06
MRPL40YPL173W RHO1P06780 209 aaKnown RBP2.17□□□□□ -2.06
MRPL40YPL173W YCR102CP25608 368 aa2.17□□□□□ -2.06
MRPL40YPL173W NTG1P31378 399 aa2.17□□□□□ -2.06
MRPL40YPL173W PRY2P36110 329 aa2.17□□□□□ -2.06
MRPL40YPL173W YHI9P38765 294 aa2.17□□□□□ -2.06
MRPL40YPL173W THO1P40040 218 aaKnown RBP2.17□□□□□ -2.06
MRPL40YPL173W SNZ3P43545 298 aa2.17□□□□□ -2.06
MRPL40YPL173W YFR045WP43617 309 aa2.17□□□□□ -2.06
MRPL40YPL173W OST3P48439 350 aa2.17□□□□□ -2.06
MRPL40YPL173W AAH1P53909 347 aa2.17□□□□□ -2.06
MRPL40YPL173W TVP15Q03860 143 aa2.17□□□□□ -2.06
MRPL40YPL173W PEX10Q05568 337 aa2.17□□□□□ -2.06
MRPL40YPL173W ATG17Q06410 417 aa2.17□□□□□ -2.06
MRPL40YPL173W PRR2Q12310 699 aa2.17□□□□□ -2.06
MRPL40YPL173W YKR104WP0CE69 306 aa2.16□□□□□ -2.06
MRPL40YPL173W YAK1P14680 807 aa2.16□□□□□ -2.06
MRPL40YPL173W DOA4P32571 926 aa2.16□□□□□ -2.06
MRPL40YPL173W VPS21P36017 210 aaKnown RBP2.16□□□□□ -2.06
MRPL40YPL173W CAB3P36076 571 aa2.16□□□□□ -2.06
MRPL40YPL173W TRM7P38238 310 aaKnown RBP2.16□□□□□ -2.06
MRPL40YPL173W RTC3P38804 111 aaPredicted RBP2.16□□□□□ -2.06
MRPL40YPL173W RPE1P46969 238 aa2.16□□□□□ -2.06
MRPL40YPL173W SLX9P53251 210 aaPredicted RBP2.16□□□□□ -2.06
MRPL40YPL173W IES4Q08561 116 aa2.16□□□□□ -2.06
MRPL40YPL173W TIM22Q12328 207 aa2.16□□□□□ -2.06
MRPL40YPL173W GIS3Q12418 502 aa2.16□□□□□ -2.06
MRPL40YPL173W PAN1P32521 1480 aa2.15□□□□□ -2.06
MRPL40YPL173W YOL163WP0CF20 169 aa2.15□□□□□ -2.07
MRPL40YPL173W RPB4P20433 221 aaPredicted RBP2.15□□□□□ -2.07
MRPL40YPL173W MRPL25P23369 157 aa2.15□□□□□ -2.07
MRPL40YPL173W AGA2P32781 87 aa2.15□□□□□ -2.07
MRPL40YPL173W YKT6P36015 200 aaKnown RBP2.15□□□□□ -2.07
MRPL40YPL173W URA8P38627 578 aaPredicted RBP2.15□□□□□ -2.07
MRPL40YPL173W TCD1P38756 429 aa2.15□□□□□ -2.07
MRPL40YPL173W SUR2P38992 349 aa2.15□□□□□ -2.07
MRPL40YPL173W MRH4P53166 561 aa2.15□□□□□ -2.07
MRPL40YPL173W SNZ2P53824 298 aa2.15□□□□□ -2.07
MRPL40YPL173W CWC21Q03375 135 aaKnown RBP2.15□□□□□ -2.07
MRPL40YPL173W EMI1Q04406 187 aa2.15□□□□□ -2.07
MRPL40YPL173W SPG4Q04438 115 aa2.15□□□□□ -2.07
MRPL40YPL173W DCR2Q05924 578 aa2.15□□□□□ -2.07
MRPL40YPL173W YPS3Q12303 508 aa2.15□□□□□ -2.07
MRPL40YPL173W IES3Q12345 250 aa2.15□□□□□ -2.07
MRPL40YPL173W ADF1Q2V2Q1 113 aa2.15□□□□□ -2.07
MRPL40YPL173W YPL229WQ99395 206 aa2.15□□□□□ -2.07
MRPL40YPL173W THP2O13539 261 aaKnown RBP2.14□□□□□ -2.07
MRPL40YPL173W ZWF1P11412 505 aaKnown RBP2.14□□□□□ -2.07
MRPL40YPL173W TOM40P23644 387 aaKnown RBP2.14□□□□□ -2.07
MRPL40YPL173W DPB2P24482 689 aaPredicted RBP2.14□□□□□ -2.07
MRPL40YPL173W PBN1P25580 416 aa2.14□□□□□ -2.07
MRPL40YPL173W VMA6P32366 345 aaKnown RBP2.14□□□□□ -2.07
MRPL40YPL173W ECM13P38195 257 aa2.14□□□□□ -2.07
MRPL40YPL173W FZO1P38297 855 aa2.14□□□□□ -2.07
MRPL40YPL173W SPL2P38839 148 aa2.14□□□□□ -2.07
MRPL40YPL173W YJL028WP47062 111 aa2.14□□□□□ -2.07
MRPL40YPL173W PGA2P53903 129 aa2.14□□□□□ -2.07
MRPL40YPL173W FCF1Q05498 189 aaPredicted RBP2.14□□□□□ -2.07
MRPL40YPL173W YPR147CQ06522 304 aaKnown RBP2.14□□□□□ -2.07
MRPL40YPL173W YOL019WQ08157 551 aa2.14□□□□□ -2.07
MRPL40YPL173W RRS1Q08746 203 aaKnown RBP2.14□□□□□ -2.07
MRPL40YPL173W SNU23Q12368 194 aaPredicted RBP2.14□□□□□ -2.07
MRPL40YPL173W YPL247CQ12523 523 aa2.14□□□□□ -2.07
MRPL40YPL173W SEY1Q99287 776 aa2.14□□□□□ -2.07
MRPL40YPL173W RPL24BP24000 155 aaKnown RBP2.13□□□□□ -2.07
MRPL40YPL173W PPA2P28239 310 aa2.13□□□□□ -2.07
MRPL40YPL173W NTF2P33331 125 aaKnown RBP2.13□□□□□ -2.07
MRPL40YPL173W SGE1P33335 543 aa2.13□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 71.7 ms