RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	YMR010W	Q03687	405 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	YMR254C	Q04838	102 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	RBS1	Q05672	457 aa	Known RBP	2.28	□□□□□ -2.04
SKP2	YNL311C	YHC1	Q05900	231 aa	Known RBP	2.28	□□□□□ -2.04
SKP2	YNL311C	ARO10	Q06408	635 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	YOR378W	Q08902	515 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	YLR053C	Q12026	108 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	TGS1	Q12052	315 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	YOR029W	Q12243	111 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	RPN6	Q12377	434 aa		2.28	□□□□□ -2.04
SKP2	YNL311C	REP2	P03872	296 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	ILV2	P07342	687 aa	Known RBP	2.28	□□□□□ -2.05
SKP2	YNL311C	ERV1	P27882	189 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	AFG1	P32317	509 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	HYM1	P32464	399 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	SWD2	P36104	329 aa	Predicted RBP	2.28	□□□□□ -2.05
SKP2	YNL311C	SRL3	P36167	246 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	ALP1	P38971	573 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	TAF4	P50105	388 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	YGR054W	P53235	642 aa	Known RBP	2.28	□□□□□ -2.05
SKP2	YNL311C	HSP31	Q04432	237 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	SNO4	Q04902	237 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	RRT8	Q08219	342 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	HSP33	Q08914	237 aa	Known RBP	2.28	□□□□□ -2.05
SKP2	YNL311C	HSP32	Q08992	237 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	BBP1	Q12365	385 aa		2.28	□□□□□ -2.05
SKP2	YNL311C	SPS4	P09937	338 aa		2.27	□□□□□ -2.05
SKP2	YNL311C	PRP28	P23394	588 aa		2.27	□□□□□ -2.05
SKP2	YNL311C	LHP1	P33399	275 aa	Known RBP	2.27	□□□□□ -2.05
SKP2	YNL311C	RPS0B	P46654	252 aa	Known RBP	2.27	□□□□□ -2.05
SKP2	YNL311C	PIR5	P46999	287 aa		2.27	□□□□□ -2.05
SKP2	YNL311C	YKR011C	Q02209	353 aa		2.27	□□□□□ -2.05
SKP2	YNL311C	STD1	Q02794	444 aa		2.27	□□□□□ -2.05
SKP2	YNL311C	DML1	Q03652	475 aa		2.27	□□□□□ -2.05
SKP2	YNL311C	PEX12	Q04370	399 aa		2.27	□□□□□ -2.05
SKP2	YNL311C	MF(ALPHA)1	P01149	165 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	SIR2	P06700	562 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	YBR184W	P38299	523 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	SSY5	P47002	699 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	LIA1	P47120	325 aa	Known RBP	2.26	□□□□□ -2.05
SKP2	YNL311C	ASI3	P53983	676 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	HHT1	P61830	136 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	TVP15	Q03860	143 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	SPO77	Q06134	477 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	YDL086W	Q07505	273 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	HRT1	Q08273	121 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	YKL018C-A	Q3E7A7	99 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	ASF2	P32448	525 aa	Predicted RBP	2.26	□□□□□ -2.05
SKP2	YNL311C	SVL3	Q03088	825 aa	Known RBP	2.26	□□□□□ -2.05
SKP2	YNL311C	NNT1	Q05874	261 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	SLF1	Q12034	447 aa	Known RBP	2.26	□□□□□ -2.05
SKP2	YNL311C	FRE6	Q12473	712 aa		2.26	□□□□□ -2.05
SKP2	YNL311C	COX5B	P00425	151 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	SOD2	P00447	233 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	HXT2	P23585	541 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	LTV1	P34078	463 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	RGI1	P40043	161 aa	Predicted RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	BMT5	P40493	336 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	NAS2	P40555	220 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	IMD4	P50094	524 aa	Known RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	YIP1	P53039	248 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	YNR048W	P53740	393 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	RNH201	P53942	307 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	HMO1	Q03973	246 aa	Known RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	LIP2	Q06005	328 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	YDL114W	Q07530	308 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	GRC3	Q07845	632 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	YEH2	Q07950	538 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	SYC1	Q08553	188 aa	Predicted RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	RPL30	P14120	105 aa	Known RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	SAC1	P32368	623 aa	Known RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	ALK2	P32789	676 aa	Predicted RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	PDC2	P32896	925 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	NUF2	P33895	451 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	RIB1	P38066	345 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	YBR063C	P38083	404 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	SRO77	P38163	1010 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	RSP5	P39940	809 aa	Known RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	OKP1	P53298	406 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	CUS2	P53830	285 aa	Predicted RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	YMR102C	Q03177	834 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	MIX17	Q03667	156 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	AIM36	Q03798	255 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	YDR114C	Q04597	100 aa		2.25	□□□□□ -2.05
SKP2	YNL311C	DBP9	Q06218	594 aa	Known RBP	2.25	□□□□□ -2.05
SKP2	YNL311C	PWP1	P21304	576 aa	Known RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	DPB2	P24482	689 aa	Predicted RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	KRR1	P25586	316 aa	Predicted RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	YEL043W	P32618	956 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	SRP102	P36057	244 aa	Predicted RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	YKR015C	P36111	568 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	PAC2	P39937	518 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	HIS6	P40545	261 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	YJR056C	P47115	236 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	BAT2	P47176	376 aa	Known RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	ATG26	Q06321	1198 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	ADE8	P04161	214 aa		2.24	□□□□□ -2.05
SKP2	YNL311C	RPS13	P05756	151 aa	Known RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	RPL11A	P0C0W9	174 aa	Known RBP	2.24	□□□□□ -2.05
SKP2	YNL311C	SAG1	P20840	650 aa		2.24	□□□□□ -2.05

Retrieved 100 of 5,963 RNA–protein pairs in 109.7 ms