RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C ATS1P31386 333 aa3.2□□□□□ -1.9
SSO2YMR183C CDC13P32797 924 aaKnown RBP3.2□□□□□ -1.9
SSO2YMR183C DRE2P36152 348 aa3.2□□□□□ -1.9
SSO2YMR183C RFT1P38206 574 aaPredicted RBP3.2□□□□□ -1.9
SSO2YMR183C YBR096WP38256 230 aa3.2□□□□□ -1.9
SSO2YMR183C AME1P38313 324 aa3.2□□□□□ -1.9
SSO2YMR183C MTC4P38335 694 aaKnown RBP3.2□□□□□ -1.9
SSO2YMR183C PET8P38921 284 aa3.2□□□□□ -1.9
SSO2YMR183C RPR2P40571 144 aa3.2□□□□□ -1.9
SSO2YMR183C AIM23P47015 356 aa3.2□□□□□ -1.9
SSO2YMR183C YJR149WP47177 404 aa3.2□□□□□ -1.9
SSO2YMR183C NUP57P48837 541 aa3.2□□□□□ -1.9
SSO2YMR183C TRM9P49957 279 aa3.2□□□□□ -1.9
SSO2YMR183C PRP24P49960 444 aaKnown RBP3.2□□□□□ -1.9
SSO2YMR183C SUR7P54003 302 aa3.2□□□□□ -1.9
SSO2YMR183C THP3Q12049 470 aaKnown RBP3.2□□□□□ -1.9
SSO2YMR183C DRS2P39524 1355 aa3.2□□□□□ -1.9
SSO2YMR183C MMS22Q06164 1454 aa3.2□□□□□ -1.9
SSO2YMR183C TY1B-DR3Q99231 1755 aa3.2□□□□□ -1.9
SSO2YMR183C TRP1P00912 224 aa3.19□□□□□ -1.9
SSO2YMR183C TPI1P00942 248 aaKnown RBP3.19□□□□□ -1.9
SSO2YMR183C RPS18AP0CX55 146 aaKnown RBP3.19□□□□□ -1.9
SSO2YMR183C RPS18BP0CX56 146 aaPredicted RBP3.19□□□□□ -1.9
SSO2YMR183C MCK1P21965 375 aaKnown RBP3.19□□□□□ -1.9
SSO2YMR183C PPH21P23594 369 aa3.19□□□□□ -1.9
SSO2YMR183C IFM1P25038 676 aa3.19□□□□□ -1.9
SSO2YMR183C SPS18P32572 300 aa3.19□□□□□ -1.9
SSO2YMR183C SGE1P33335 543 aa3.19□□□□□ -1.9
SSO2YMR183C YPT52P36018 234 aaKnown RBP3.19□□□□□ -1.9
SSO2YMR183C CAF4P36130 643 aa3.19□□□□□ -1.9
SSO2YMR183C FIG1P38224 298 aa3.19□□□□□ -1.9
SSO2YMR183C YER121WP40076 114 aa3.19□□□□□ -1.9
SSO2YMR183C HAC1P41546 238 aa3.19□□□□□ -1.9
SSO2YMR183C GAB1P41733 394 aa3.19□□□□□ -1.9
SSO2YMR183C MMS2P53152 137 aa3.19□□□□□ -1.9
SSO2YMR183C NRM1P53718 249 aa3.19□□□□□ -1.9
SSO2YMR183C YLR152CP54072 576 aa3.19□□□□□ -1.9
SSO2YMR183C VPS60Q03390 229 aa3.19□□□□□ -1.9
SSO2YMR183C PEX12Q04370 399 aa3.19□□□□□ -1.9
SSO2YMR183C YPL150WQ12152 901 aa3.19□□□□□ -1.9
SSO2YMR183C YGK3Q12222 375 aaPredicted RBP3.19□□□□□ -1.9
SSO2YMR183C YDL199CQ12407 687 aa3.19□□□□□ -1.9
SSO2YMR183C FOL3Q12676 427 aaPredicted RBP3.19□□□□□ -1.9
SSO2YMR183C MHP1P43638 1398 aa3.19□□□□□ -1.9
SSO2YMR183C VPS15P22219 1454 aa3.19□□□□□ -1.9
SSO2YMR183C TRM732Q03496 1420 aa3.19□□□□□ -1.9
SSO2YMR183C NUP159P40477 1460 aa3.18□□□□□ -1.9
SSO2YMR183C YAL064W-BO13512 126 aa3.18□□□□□ -1.9
SSO2YMR183C BCY1P07278 416 aaKnown RBP3.18□□□□□ -1.9
SSO2YMR183C PUT1P09368 476 aa3.18□□□□□ -1.9
SSO2YMR183C ZWF1P11412 505 aaKnown RBP3.18□□□□□ -1.9
SSO2YMR183C CPR1P14832 162 aaKnown RBP3.18□□□□□ -1.9
SSO2YMR183C TRR1P29509 319 aaKnown RBP3.18□□□□□ -1.9
SSO2YMR183C PMT2P31382 759 aa3.18□□□□□ -1.9
SSO2YMR183C ALK2P32789 676 aaPredicted RBP3.18□□□□□ -1.9
SSO2YMR183C YCR087C-AP37263 153 aa3.18□□□□□ -1.9
SSO2YMR183C HEK2P38199 381 aaKnown RBP RIP-Chip data3.18□□□□□ -1.9not detected
SSO2YMR183C MED8P38304 223 aa3.18□□□□□ -1.9
SSO2YMR183C YHR127WP38833 243 aaKnown RBP3.18□□□□□ -1.9
SSO2YMR183C HEM14P40012 539 aa3.18□□□□□ -1.9
SSO2YMR183C SER33P40510 469 aa3.18□□□□□ -1.9
SSO2YMR183C YKE4P40544 346 aa3.18□□□□□ -1.9
SSO2YMR183C SNZ3P43545 298 aa3.18□□□□□ -1.9
SSO2YMR183C SHY1P53266 389 aa3.18□□□□□ -1.9
SSO2YMR183C SNZ2P53824 298 aa3.18□□□□□ -1.9
SSO2YMR183C SWS2P53937 143 aa3.18□□□□□ -1.9
SSO2YMR183C PRP38Q00723 242 aaPredicted RBP3.18□□□□□ -1.9
SSO2YMR183C YML018CQ03730 393 aa3.18□□□□□ -1.9
SSO2YMR183C YMR166CQ03829 368 aa3.18□□□□□ -1.9
SSO2YMR183C YET2Q04210 160 aa3.18□□□□□ -1.9
SSO2YMR183C GAS2Q06135 555 aa3.18□□□□□ -1.9
SSO2YMR183C WTM1Q12363 437 aaKnown RBP3.18□□□□□ -1.9
SSO2YMR183C CYC3P06182 269 aa3.17□□□□□ -1.9
SSO2YMR183C STE7P06784 515 aa3.17□□□□□ -1.9
SSO2YMR183C GCY1P14065 312 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
SSO2YMR183C RNA14P25298 677 aaKnown RBP3.17□□□□□ -1.9
SSO2YMR183C MEI4P29467 408 aa3.17□□□□□ -1.9
SSO2YMR183C URA10P30402 227 aa3.17□□□□□ -1.9
SSO2YMR183C AEP1P32493 518 aa3.17□□□□□ -1.9
SSO2YMR183C YKL075CP36083 450 aa3.17□□□□□ -1.9
SSO2YMR183C MRPL3P36516 390 aa3.17□□□□□ -1.9
SSO2YMR183C MRP21P38175 177 aa3.17□□□□□ -1.9
SSO2YMR183C SHG1P38337 142 aa3.17□□□□□ -1.9
SSO2YMR183C GRE3P38715 327 aaKnown RBP RIP-Chip data3.17□□□□□ -1.9not detected
SSO2YMR183C GOS1P38736 223 aa3.17□□□□□ -1.9
SSO2YMR183C SEO1P39709 593 aa3.17□□□□□ -1.9
SSO2YMR183C VAB2P40003 282 aa3.17□□□□□ -1.9
SSO2YMR183C KRE29P40026 464 aa3.17□□□□□ -1.9
SSO2YMR183C PAN6P40459 309 aa3.17□□□□□ -1.9
SSO2YMR183C YFL067WP43537 175 aa3.17□□□□□ -1.9
SSO2YMR183C YJL016WP47072 561 aa3.17□□□□□ -1.9
SSO2YMR183C NBP35P52920 328 aa3.17□□□□□ -1.9
SSO2YMR183C YGL039WP53183 348 aaKnown RBP3.17□□□□□ -1.9
SSO2YMR183C GTR2P53290 341 aa3.17□□□□□ -1.9
SSO2YMR183C FYV6P53913 173 aa3.17□□□□□ -1.9
SSO2YMR183C SNO1Q03144 224 aa3.17□□□□□ -1.9
SSO2YMR183C SCS7Q03529 384 aa3.17□□□□□ -1.9
SSO2YMR183C FSH2Q05015 223 aa3.17□□□□□ -1.9
SSO2YMR183C YHC1Q05900 231 aaKnown RBP3.17□□□□□ -1.9
SSO2YMR183C MMT2Q08970 484 aa3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 39.4 ms