RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C YPS5P53057 165 aa1.69□□□□□ -2.14
SOK2YMR016C DIA1P54005 336 aa1.69□□□□□ -2.14
SOK2YMR016C MRPS16Q02608 121 aa1.69□□□□□ -2.14
SOK2YMR016C LIP2Q06005 328 aa1.69□□□□□ -2.14
SOK2YMR016C GPN3Q06543 272 aa1.69□□□□□ -2.14
SOK2YMR016C SDO1Q07953 250 aaKnown RBP1.69□□□□□ -2.14
SOK2YMR016C RPN8Q08723 338 aaKnown RBP1.69□□□□□ -2.14
SOK2YMR016C YOR292CQ08743 309 aa1.69□□□□□ -2.14
SOK2YMR016C YOR114WQ12219 294 aa1.69□□□□□ -2.14
SOK2YMR016C CDC33P07260 213 aaKnown RBP1.68□□□□□ -2.14
SOK2YMR016C KSS1P14681 368 aa1.68□□□□□ -2.14
SOK2YMR016C HSP26P15992 214 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SOK2YMR016C PRR1P28708 518 aa1.68□□□□□ -2.14
SOK2YMR016C LDS1P31379 325 aa1.68□□□□□ -2.14
SOK2YMR016C GDH2P33327 1092 aaKnown RBP1.68□□□□□ -2.14
SOK2YMR016C YKL187CP34231 750 aa1.68□□□□□ -2.14
SOK2YMR016C RIB1P38066 345 aa1.68□□□□□ -2.14
SOK2YMR016C SER33P40510 469 aa1.68□□□□□ -2.14
SOK2YMR016C APJ1P53940 528 aa1.68□□□□□ -2.14
SOK2YMR016C MRX11Q03079 207 aa1.68□□□□□ -2.14
SOK2YMR016C YLR446WQ06204 433 aa1.68□□□□□ -2.14
SOK2YMR016C BRX1Q08235 291 aaKnown RBP1.68□□□□□ -2.14
SOK2YMR016C RPL21BQ12672 160 aaKnown RBP1.68□□□□□ -2.14
SOK2YMR016C CMC2Q3E7A4 109 aa1.68□□□□□ -2.14
SOK2YMR016C YAL067W-AQ8TGK6 75 aa1.68□□□□□ -2.14
SOK2YMR016C RPS24AP0CX31 135 aaKnown RBP1.67□□□□□ -2.14
SOK2YMR016C RPS24BP0CX32 135 aaKnown RBP1.67□□□□□ -2.14
SOK2YMR016C COX10P21592 462 aa1.67□□□□□ -2.14
SOK2YMR016C RRT12P25381 491 aa1.67□□□□□ -2.14
SOK2YMR016C ZRT1P32804 376 aa1.67□□□□□ -2.14
SOK2YMR016C YBR241CP38142 488 aa1.67□□□□□ -2.14
SOK2YMR016C LDB7P38210 180 aa1.67□□□□□ -2.14
SOK2YMR016C TCD1P38756 429 aa1.67□□□□□ -2.14
SOK2YMR016C BIG1P38813 335 aa1.67□□□□□ -2.14
SOK2YMR016C STB1P42845 420 aa1.67□□□□□ -2.14
SOK2YMR016C CWC23P52868 283 aaPredicted RBP1.67□□□□□ -2.14
SOK2YMR016C NBP35P52920 328 aa1.67□□□□□ -2.14
SOK2YMR016C SPP2Q02521 185 aa1.67□□□□□ -2.14
SOK2YMR016C VHS1Q03785 461 aa1.67□□□□□ -2.14
SOK2YMR016C YDR115WQ04598 105 aa1.67□□□□□ -2.14
SOK2YMR016C YDR222WQ04925 415 aa1.67□□□□□ -2.14
SOK2YMR016C GAS2Q06135 555 aa1.67□□□□□ -2.14
SOK2YMR016C TPI1P00942 248 aaKnown RBP1.67□□□□□ -2.14
SOK2YMR016C PET494P07390 489 aaPredicted RBP1.67□□□□□ -2.14
SOK2YMR016C OSM1P21375 501 aaKnown RBP1.67□□□□□ -2.14
SOK2YMR016C MRPL6P32904 214 aa1.67□□□□□ -2.14
SOK2YMR016C FRM2P37261 193 aa1.67□□□□□ -2.14
SOK2YMR016C PRS4P38063 326 aaPredicted RBP1.67□□□□□ -2.14
SOK2YMR016C NPT1P39683 429 aaKnown RBP1.67□□□□□ -2.14
SOK2YMR016C SEO1P39709 593 aa1.67□□□□□ -2.14
SOK2YMR016C YER121WP40076 114 aa1.67□□□□□ -2.14
SOK2YMR016C COA1P40452 197 aa1.67□□□□□ -2.14
SOK2YMR016C HAL1Q01766 294 aa1.67□□□□□ -2.14
SOK2YMR016C API2Q04413 109 aa1.67□□□□□ -2.14
SOK2YMR016C SEC13Q04491 297 aaKnown RBP1.67□□□□□ -2.14
SOK2YMR016C MMT2Q08970 484 aa1.67□□□□□ -2.14
SOK2YMR016C SAM4Q08985 325 aaKnown RBP1.67□□□□□ -2.14
SOK2YMR016C YPQ1Q12010 308 aa1.67□□□□□ -2.14
SOK2YMR016C MSH5Q12175 901 aa1.67□□□□□ -2.14
SOK2YMR016C BI3Q9ZZW7 517 aa1.67□□□□□ -2.14
SOK2YMR016C UBR2Q07963 1872 aa1.66□□□□□ -2.14
SOK2YMR016C RAD3P06839 778 aa1.66□□□□□ -2.14
SOK2YMR016C MRPL20P22354 195 aaPredicted RBP1.66□□□□□ -2.14
SOK2YMR016C CSM1P25651 190 aa1.66□□□□□ -2.14
SOK2YMR016C GCG1P32656 232 aaKnown RBP1.66□□□□□ -2.14
SOK2YMR016C EGD2P38879 174 aaKnown RBP1.66□□□□□ -2.14
SOK2YMR016C ERG28P40030 148 aa1.66□□□□□ -2.14
SOK2YMR016C MRX5P47007 382 aa1.66□□□□□ -2.14
SOK2YMR016C COX16P47081 118 aa1.66□□□□□ -2.14
SOK2YMR016C IBA57P47158 497 aa1.66□□□□□ -2.14
SOK2YMR016C NBP1P52919 319 aaPredicted RBP1.66□□□□□ -2.14
SOK2YMR016C MIG2P53035 382 aa1.66□□□□□ -2.14
SOK2YMR016C NOP19P53317 196 aaPredicted RBP1.66□□□□□ -2.14
SOK2YMR016C RPL21AQ02753 160 aaKnown RBP1.66□□□□□ -2.14
SOK2YMR016C DCR2Q05924 578 aa1.66□□□□□ -2.14
SOK2YMR016C SPO77Q06134 477 aa1.66□□□□□ -2.14
SOK2YMR016C PEX30Q06169 523 aa1.66□□□□□ -2.14
SOK2YMR016C ASR1Q06834 288 aa1.66□□□□□ -2.14
SOK2YMR016C YKL183C-AQ3E765 70 aa1.66□□□□□ -2.14
SOK2YMR016C SSK22P25390 1331 aaPredicted RBP1.66□□□□□ -2.14
SOK2YMR016C RPL24AP04449 155 aaKnown RBP1.66□□□□□ -2.14
SOK2YMR016C STE7P06784 515 aa1.66□□□□□ -2.14
SOK2YMR016C CBP6P07253 162 aaPredicted RBP1.66□□□□□ -2.14
SOK2YMR016C CTA1P15202 515 aa1.66□□□□□ -2.14
SOK2YMR016C RBK1P25332 333 aa1.66□□□□□ -2.14
SOK2YMR016C POF1P25576 258 aa1.66□□□□□ -2.14
SOK2YMR016C MEI4P29467 408 aa1.66□□□□□ -2.14
SOK2YMR016C SPS19P32573 292 aaKnown RBP1.66□□□□□ -2.14
SOK2YMR016C PRP18P33411 251 aaPredicted RBP1.66□□□□□ -2.14
SOK2YMR016C MAL32P38158 584 aa1.66□□□□□ -2.14
SOK2YMR016C WSC4P38739 605 aa1.66□□□□□ -2.14
SOK2YMR016C HIT1P46973 164 aa1.66□□□□□ -2.14
SOK2YMR016C RPC17P47076 161 aa1.66□□□□□ -2.14
SOK2YMR016C MAL12P53341 584 aa1.66□□□□□ -2.14
SOK2YMR016C SWS2P53937 143 aa1.66□□□□□ -2.14
SOK2YMR016C YDC1Q02896 317 aa1.66□□□□□ -2.14
SOK2YMR016C PAM18Q07914 168 aa1.66□□□□□ -2.14
SOK2YMR016C HTZ1Q12692 134 aaKnown RBP1.66□□□□□ -2.14
SOK2YMR016C SEC16P48415 2195 aaKnown RBP1.66□□□□□ -2.14
SOK2YMR016C UTP20P35194 2493 aaKnown RBP1.65□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 267.6 ms