RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W SOG2Q08817 791 aa3.42□□□□□ -1.86
USA1YML029W YHR214C-EQ8TGK0 99 aa3.42□□□□□ -1.86
USA1YML029W IRA1P18963 3092 aa3.42□□□□□ -1.86
USA1YML029W EXG1P23776 448 aaKnown RBP3.41□□□□□ -1.86
USA1YML029W FUN26P31381 517 aa3.41□□□□□ -1.86
USA1YML029W REC104P33323 182 aa3.41□□□□□ -1.86
USA1YML029W RSM22P36056 628 aa3.41□□□□□ -1.86
USA1YML029W YFL054CP43549 646 aa3.41□□□□□ -1.86
USA1YML029W DPB11P47027 764 aaPredicted RBP3.41□□□□□ -1.86
USA1YML029W NIT3P49954 291 aa3.41□□□□□ -1.86
USA1YML029W BRR6P53062 197 aa3.41□□□□□ -1.86
USA1YML029W YPR196WQ06595 470 aa3.41□□□□□ -1.86
USA1YML029W TY1A-NL1Q12391 440 aaKnown RBP3.41□□□□□ -1.86
USA1YML029W IZH2Q12442 317 aa3.41□□□□□ -1.86
USA1YML029W RPN13O13563 156 aa3.41□□□□□ -1.86
USA1YML029W ADE8P04161 214 aa3.41□□□□□ -1.86
USA1YML029W SIR2P06700 562 aa3.41□□□□□ -1.86
USA1YML029W NFT1P0CE68 1218 aa3.41□□□□□ -1.86
USA1YML029W MATALPHA1P0CY06 175 aa3.41□□□□□ -1.86
USA1YML029W HMLALPHA1P0CY07 175 aa3.41□□□□□ -1.86
USA1YML029W CTA1P15202 515 aa3.41□□□□□ -1.86
USA1YML029W PUT3P25502 979 aaPredicted RBP3.41□□□□□ -1.86
USA1YML029W ATG15P25641 520 aa3.41□□□□□ -1.86
USA1YML029W PAU24P38155 120 aa3.41□□□□□ -1.86
USA1YML029W PRE3P38624 215 aa3.41□□□□□ -1.86
USA1YML029W IDP2P41939 412 aa3.41□□□□□ -1.86
USA1YML029W SAY1P53324 424 aa3.41□□□□□ -1.86
USA1YML029W YNL092WP53934 400 aa3.41□□□□□ -1.86
USA1YML029W YAP6Q03935 383 aa3.41□□□□□ -1.86
USA1YML029W HED1Q03937 162 aa3.41□□□□□ -1.86
USA1YML029W HLR1Q04429 423 aa3.41□□□□□ -1.86
USA1YML029W CRR1Q05790 422 aa3.41□□□□□ -1.86
USA1YML029W NGL1Q08213 363 aaKnown RBP3.41□□□□□ -1.86
USA1YML029W USB1Q12208 290 aaKnown RBP3.41□□□□□ -1.86
USA1YML029W YPR1Q12458 312 aa3.41□□□□□ -1.86
USA1YML029W SEC16P48415 2195 aaKnown RBP3.41□□□□□ -1.86
USA1YML029W YLR358CO13565 187 aa3.4□□□□□ -1.86
USA1YML029W OPI3P05375 206 aa3.4□□□□□ -1.86
USA1YML029W ARO3P14843 370 aaKnown RBP3.4□□□□□ -1.86
USA1YML029W PPA2P28239 310 aa3.4□□□□□ -1.86
USA1YML029W RAI1P53063 387 aaKnown RBP3.4□□□□□ -1.86
USA1YML029W IMO32P53219 342 aa3.4□□□□□ -1.86
USA1YML029W YLR152CP54072 576 aa3.4□□□□□ -1.86
USA1YML029W CIK1Q01649 594 aa3.4□□□□□ -1.86
USA1YML029W RCE1Q03530 315 aa3.4□□□□□ -1.86
USA1YML029W MRX8Q05473 314 aa3.4□□□□□ -1.86
USA1YML029W GPN3Q06543 272 aa3.4□□□□□ -1.86
USA1YML029W PML1Q07930 204 aaPredicted RBP3.4□□□□□ -1.86
USA1YML029W RSC58Q07979 502 aa3.4□□□□□ -1.86
USA1YML029W SYC1Q08553 188 aaPredicted RBP3.4□□□□□ -1.86
USA1YML029W SPO24Q3E752 67 aa3.4□□□□□ -1.86
USA1YML029W PDE2P06776 526 aa3.4□□□□□ -1.87
USA1YML029W CPR2P23285 205 aa3.4□□□□□ -1.87
USA1YML029W BOS1P25385 244 aa3.4□□□□□ -1.87
USA1YML029W ZRT3P34240 503 aa3.4□□□□□ -1.87
USA1YML029W COS9P36034 407 aa3.4□□□□□ -1.87
USA1YML029W MBA1P38300 278 aa3.4□□□□□ -1.87
USA1YML029W YGP1P38616 354 aaKnown RBP3.4□□□□□ -1.87
USA1YML029W PRS3P38689 320 aaKnown RBP3.4□□□□□ -1.87
USA1YML029W SMB1P40018 196 aaKnown RBP3.4□□□□□ -1.87
USA1YML029W FCY21P40039 528 aa3.4□□□□□ -1.87
USA1YML029W PAM16P42949 149 aa3.4□□□□□ -1.87
USA1YML029W LOH1P47055 219 aa3.4□□□□□ -1.87
USA1YML029W CWC23P52868 283 aaPredicted RBP3.4□□□□□ -1.87
USA1YML029W YIP5P53108 310 aa3.4□□□□□ -1.87
USA1YML029W NCE103P53615 221 aa3.4□□□□□ -1.87
USA1YML029W RSM24Q03976 319 aa3.4□□□□□ -1.87
USA1YML029W YMR252CQ04814 134 aa3.4□□□□□ -1.87
USA1YML029W COQ11Q05892 277 aa3.4□□□□□ -1.87
USA1YML029W RFU1Q08003 200 aa3.4□□□□□ -1.87
USA1YML029W PEX27Q08580 376 aa3.4□□□□□ -1.87
USA1YML029W YLR099W-AQ3E798 87 aa3.4□□□□□ -1.87
USA1YML029W TDH3P00359 332 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
USA1YML029W RPL6BP05739 176 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W RPS13P05756 151 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W DBF2P22204 572 aa3.39□□□□□ -1.87
USA1YML029W VMA8P32610 256 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W PAU2P32612 120 aa3.39□□□□□ -1.87
USA1YML029W SPT10P35208 640 aa3.39□□□□□ -1.87
USA1YML029W TAT1P38085 619 aa3.39□□□□□ -1.87
USA1YML029W YHK8P38776 514 aa3.39□□□□□ -1.87
USA1YML029W IMD3P50095 523 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W PMT5P52867 743 aa3.39□□□□□ -1.87
USA1YML029W YNR048WP53740 393 aa3.39□□□□□ -1.87
USA1YML029W NRK1P53915 240 aa3.39□□□□□ -1.87
USA1YML029W TIM10P87108 93 aa3.39□□□□□ -1.87
USA1YML029W PLB2Q03674 706 aa3.39□□□□□ -1.87
USA1YML029W MSS11Q03825 758 aa3.39□□□□□ -1.87
USA1YML029W RBS1Q05672 457 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W HMS1Q12398 434 aa3.39□□□□□ -1.87
USA1YML029W SUS1Q6WNK7 96 aa3.39□□□□□ -1.87
USA1YML029W SOD2P00447 233 aa3.39□□□□□ -1.87
USA1YML029W MET3P08536 511 aa3.39□□□□□ -1.87
USA1YML029W RPL35AP0CX84 120 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W RPL35BP0CX85 120 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W RPI1P23250 407 aaKnown RBP3.39□□□□□ -1.87
USA1YML029W NPL6P32832 435 aa3.39□□□□□ -1.87
USA1YML029W MTH1P35198 433 aa3.39□□□□□ -1.87
USA1YML029W RCN1P36054 211 aa3.39□□□□□ -1.87
USA1YML029W SHE2P36068 246 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms