RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeast

Gene NIT3, Length 876 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIT3	YLR351C	HIS2	P38635	335 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	TDA11	P38854	504 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	ASP1	P38986	381 aa	Predicted RBP	3.15	□□□□□ -1.91
NIT3	YLR351C	GDS1	P41913	522 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	AGP3	P43548	558 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	CAX4	P53223	239 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	ALG11	P53954	548 aa	Known RBP	3.15	□□□□□ -1.91
NIT3	YLR351C	TIM8	P57744	87 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	GPN3	Q06543	272 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	MRPL23	Q12487	163 aa	Predicted RBP	3.15	□□□□□ -1.91
NIT3	YLR351C	YPR064W	Q12492	139 aa		3.15	□□□□□ -1.91
NIT3	YLR351C	TAO3	P40468	2376 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	MEK1	P24719	497 aa	Predicted RBP	3.14	□□□□□ -1.91
NIT3	YLR351C	YET1	P35723	206 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	GPX1	P36014	167 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	TPO5	P36029	618 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	RPC37	P36121	282 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	AIM29	P36154	155 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	ZRG17	P53735	605 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
NIT3	YLR351C	BER1	Q06688	274 aa	Known RBP	3.14	□□□□□ -1.91
NIT3	YLR351C	ASR1	Q06834	288 aa		3.14	□□□□□ -1.91
NIT3	YLR351C	PHO13	P19881	312 aa		3.13	□□□□□ -1.91
NIT3	YLR351C	VPS3	P23643	1011 aa		3.13	□□□□□ -1.91
NIT3	YLR351C	GCG1	P32656	232 aa	Known RBP	3.13	□□□□□ -1.91
NIT3	YLR351C	CDC13	P32797	924 aa	Known RBP	3.13	□□□□□ -1.91
NIT3	YLR351C	RPS0A	P32905	252 aa	Known RBP	3.13	□□□□□ -1.91
NIT3	YLR351C	CSG2	P35206	410 aa		3.13	□□□□□ -1.91
NIT3	YLR351C	EDC2	P40023	145 aa	Predicted RBP	3.13	□□□□□ -1.91
NIT3	YLR351C	PFS2	P42841	465 aa	Known RBP	3.13	□□□□□ -1.91
NIT3	YLR351C	ASG7	P46993	209 aa		3.13	□□□□□ -1.91
NIT3	YLR351C	YPT32	P51996	222 aa	Known RBP	3.13	□□□□□ -1.91
NIT3	YLR351C	YGL185C	P53100	379 aa		3.13	□□□□□ -1.91
NIT3	YLR351C	ACT1	P60010	375 aa	Known RBP	3.13	□□□□□ -1.91
NIT3	YLR351C	CDD1	Q06549	142 aa		3.13	□□□□□ -1.91
NIT3	YLR351C	CCH1	P50077	2039 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	PRY2	P36110	329 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	YBR062C	P38239	180 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	PEX18	P38855	283 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	SHQ1	P40486	507 aa	Predicted RBP	3.12	□□□□□ -1.91
NIT3	YLR351C	YFL064C	P43540	174 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	COS4	P43542	379 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	CPR7	P47103	393 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	MND1	P53102	219 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	ARC18	Q05933	178 aa	Known RBP	3.12	□□□□□ -1.91
NIT3	YLR351C	PEX30	Q06169	523 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	YDR034W-B	Q6Q5X2	51 aa		3.12	□□□□□ -1.91
NIT3	YLR351C	RPS3	P05750	240 aa	Known RBP	3.11	□□□□□ -1.91
NIT3	YLR351C	RPC40	P07703	335 aa	Known RBP	3.11	□□□□□ -1.91
NIT3	YLR351C	TFS1	P14306	219 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	RRT12	P25381	491 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	CSE1	P33307	960 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	AST1	P35183	429 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	YKL070W	P36087	169 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	SMC2	P38989	1170 aa	Known RBP	3.11	□□□□□ -1.91
NIT3	YLR351C	GPI8	P49018	411 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	TAZ1	Q06510	381 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	ABP140	Q08641	628 aa	Known RBP	3.11	□□□□□ -1.91
NIT3	YLR351C	YPL278C	Q08990	100 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	GPM2	Q12008	311 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	PRP46	Q12417	451 aa	Predicted RBP	3.11	□□□□□ -1.91
NIT3	YLR351C	PRM7	Q12459	698 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	AI5_BETA	Q9ZZX0	354 aa		3.11	□□□□□ -1.91
NIT3	YLR351C	CDC33	P07260	213 aa	Known RBP	3.1	□□□□□ -1.91
NIT3	YLR351C	RPL4A	P10664	362 aa	Known RBP	3.1	□□□□□ -1.91
NIT3	YLR351C	DAL81	P21657	970 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	AEP1	P32493	518 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	TKL2	P33315	681 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	MRPL3	P36516	390 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	SPT8	P38915	602 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	YIA6	P40556	373 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	RPL4B	P49626	362 aa	Known RBP	3.1	□□□□□ -1.91
NIT3	YLR351C	HOP2	P53187	214 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	CWC21	Q03375	135 aa	Known RBP	3.1	□□□□□ -1.91
NIT3	YLR351C	MZM1	Q03429	123 aa	Predicted RBP	3.1	□□□□□ -1.91
NIT3	YLR351C	YPR195C	Q06594	109 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	YPL264C	Q08980	353 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	POM33	Q12164	279 aa		3.1	□□□□□ -1.91
NIT3	YLR351C	JIP3	O13555	125 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	SPT4	P32914	102 aa	Predicted RBP	3.09	□□□□□ -1.91
NIT3	YLR351C	KRE29	P40026	464 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	MOB1	P40484	314 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	YIL059C	P40520	121 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	PRP24	P49960	444 aa	Known RBP	3.09	□□□□□ -1.91
NIT3	YLR351C	TAF9	Q05027	157 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	DPP1	Q05521	289 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	DAS2	Q12084	232 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	FMP16	Q12497	93 aa		3.09	□□□□□ -1.91
NIT3	YLR351C	SSA3	P09435	649 aa	Known RBP	3.08	□□□□□ -1.92
NIT3	YLR351C	IMP1	P28627	190 aa		3.08	□□□□□ -1.92
NIT3	YLR351C	ARO4	P32449	370 aa	Known RBP	3.08	□□□□□ -1.92
NIT3	YLR351C	MBA1	P38300	278 aa		3.08	□□□□□ -1.92
NIT3	YLR351C	SNZ3	P43545	298 aa		3.08	□□□□□ -1.92
NIT3	YLR351C	SNZ2	P53824	298 aa		3.08	□□□□□ -1.92
NIT3	YLR351C	YMR209C	Q03648	457 aa		3.08	□□□□□ -1.92
NIT3	YLR351C	SUA5	P32579	426 aa		3.07	□□□□□ -1.92
NIT3	YLR351C	AGA2	P32781	87 aa		3.07	□□□□□ -1.92
NIT3	YLR351C	PPQ1	P32945	549 aa		3.07	□□□□□ -1.92
NIT3	YLR351C	YIL012W	P40551	113 aa		3.07	□□□□□ -1.92
NIT3	YLR351C	TPN1	P53099	579 aa		3.07	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 46.1 ms