RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W YKL075CP36083 450 aa1.07□□□□□ -2.24
SLX4YLR135W TRM7P38238 310 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W FZO1P38297 855 aa1.07□□□□□ -2.24
SLX4YLR135W THO1P40040 218 aaKnown RBP1.07□□□□□ -2.24
SLX4YLR135W RTR1P40084 226 aaPredicted RBP1.07□□□□□ -2.24
SLX4YLR135W YIR035CP40579 254 aa1.07□□□□□ -2.24
SLX4YLR135W OTU1P43558 301 aa1.07□□□□□ -2.24
SLX4YLR135W RPC17P47076 161 aa1.07□□□□□ -2.24
SLX4YLR135W JHD2P47156 728 aaPredicted RBP1.07□□□□□ -2.24
SLX4YLR135W USE1P53146 245 aa1.07□□□□□ -2.24
SLX4YLR135W SWT21P53873 357 aaPredicted RBP1.07□□□□□ -2.24
SLX4YLR135W ASI3P53983 676 aa1.07□□□□□ -2.24
SLX4YLR135W YDR209CQ03480 137 aa1.07□□□□□ -2.24
SLX4YLR135W ATG17Q06410 417 aa1.07□□□□□ -2.24
SLX4YLR135W COQ10Q08058 207 aa1.07□□□□□ -2.24
SLX4YLR135W YPR063CQ12160 140 aa1.07□□□□□ -2.24
SLX4YLR135W RFM1Q12192 310 aa1.07□□□□□ -2.24
SLX4YLR135W POX1P13711 748 aa1.06□□□□□ -2.24
SLX4YLR135W SRB4P32569 687 aa1.06□□□□□ -2.24
SLX4YLR135W MSN4P33749 630 aa1.06□□□□□ -2.24
SLX4YLR135W BMH2P34730 273 aaKnown RBP1.06□□□□□ -2.24
SLX4YLR135W DRE2P36152 348 aa1.06□□□□□ -2.24
SLX4YLR135W YBR096WP38256 230 aa1.06□□□□□ -2.24
SLX4YLR135W YHL049CP38722 271 aa1.06□□□□□ -2.24
SLX4YLR135W ARN2P38724 620 aa1.06□□□□□ -2.24
SLX4YLR135W YJR079WP47126 109 aa1.06□□□□□ -2.24
SLX4YLR135W OST3P48439 350 aa1.06□□□□□ -2.24
SLX4YLR135W MRH4P53166 561 aa1.06□□□□□ -2.24
SLX4YLR135W YMR166CQ03829 368 aa1.06□□□□□ -2.24
SLX4YLR135W GTO3Q04806 366 aa1.06□□□□□ -2.24
SLX4YLR135W YPR098CQ06089 161 aa1.06□□□□□ -2.24
SLX4YLR135W SPO77Q06134 477 aa1.06□□□□□ -2.24
SLX4YLR135W YCT1Q12235 531 aa1.06□□□□□ -2.24
SLX4YLR135W PRR2Q12310 699 aa1.06□□□□□ -2.24
SLX4YLR135W YDL012CQ12489 107 aa1.06□□□□□ -2.24
SLX4YLR135W YPL119C-AQ3E751 87 aa1.06□□□□□ -2.24
SLX4YLR135W YKR104WP0CE69 306 aa1.05□□□□□ -2.24
SLX4YLR135W NTG1P31378 399 aa1.05□□□□□ -2.24
SLX4YLR135W AGA2P32781 87 aa1.05□□□□□ -2.24
SLX4YLR135W JEN1P36035 616 aa1.05□□□□□ -2.24
SLX4YLR135W ECM13P38195 257 aa1.05□□□□□ -2.24
SLX4YLR135W GOS1P38736 223 aa1.05□□□□□ -2.24
SLX4YLR135W TEM1P38987 245 aa1.05□□□□□ -2.24
SLX4YLR135W MSS2P40990 351 aa1.05□□□□□ -2.24
SLX4YLR135W RPE1P46969 238 aa1.05□□□□□ -2.24
SLX4YLR135W CPR7P47103 393 aa1.05□□□□□ -2.24
SLX4YLR135W NOP13P53883 403 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SLX4YLR135W MYO5Q04439 1219 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W PEX10Q05568 337 aa1.05□□□□□ -2.24
SLX4YLR135W RLP24Q07915 199 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W PLB3Q08108 686 aa1.05□□□□□ -2.24
SLX4YLR135W SYC1Q08553 188 aaPredicted RBP1.05□□□□□ -2.24
SLX4YLR135W ISD11Q6Q560 94 aa1.05□□□□□ -2.24
SLX4YLR135W CFT1Q06632 1357 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W PAN1P32521 1480 aa1.05□□□□□ -2.24
SLX4YLR135W TCP1P12612 559 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W RPB4P20433 221 aaPredicted RBP1.05□□□□□ -2.24
SLX4YLR135W MRPL25P23369 157 aa1.05□□□□□ -2.24
SLX4YLR135W PPH21P23594 369 aa1.05□□□□□ -2.24
SLX4YLR135W TOM40P23644 387 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W YCR102CP25608 368 aa1.05□□□□□ -2.24
SLX4YLR135W SFC1P33303 322 aa1.05□□□□□ -2.24
SLX4YLR135W AST1P35183 429 aa1.05□□□□□ -2.24
SLX4YLR135W YBL081WP38180 368 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W LDB7P38210 180 aa1.05□□□□□ -2.24
SLX4YLR135W ECM14P38836 430 aa1.05□□□□□ -2.24
SLX4YLR135W SPL2P38839 148 aa1.05□□□□□ -2.24
SLX4YLR135W BFR1P38934 470 aaKnown RBP RIP-Chip data1.05□□□□□ -2.24not detected
SLX4YLR135W SUR2P38992 349 aa1.05□□□□□ -2.24
SLX4YLR135W YHB1P39676 399 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W SPO73P40031 143 aa1.05□□□□□ -2.24
SLX4YLR135W YRB1P41920 201 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W BUD13P46947 266 aaPredicted RBP1.05□□□□□ -2.24
SLX4YLR135W CTF19Q02732 369 aa1.05□□□□□ -2.24
SLX4YLR135W YPL039WQ03080 316 aa1.05□□□□□ -2.24
SLX4YLR135W GRX3Q03835 250 aa1.05□□□□□ -2.24
SLX4YLR135W SPG4Q04438 115 aa1.05□□□□□ -2.24
SLX4YLR135W YDR124WQ04608 324 aa1.05□□□□□ -2.24
SLX4YLR135W RRP40Q08285 240 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W TIM22Q12328 207 aa1.05□□□□□ -2.24
SLX4YLR135W IES3Q12345 250 aa1.05□□□□□ -2.24
SLX4YLR135W SNU23Q12368 194 aaPredicted RBP1.05□□□□□ -2.24
SLX4YLR135W YBL112CQ3E7Y4 105 aa1.05□□□□□ -2.24
SLX4YLR135W NCB2Q92317 146 aa1.05□□□□□ -2.24
SLX4YLR135W NUP157P40064 1391 aaKnown RBP1.05□□□□□ -2.24
SLX4YLR135W YEL009C-AA0A023PZF2 135 aa1.04□□□□□ -2.24
SLX4YLR135W JIP3O13555 125 aa1.04□□□□□ -2.24
SLX4YLR135W MATALPHA1P0CY06 175 aa1.04□□□□□ -2.24
SLX4YLR135W HMLALPHA1P0CY07 175 aa1.04□□□□□ -2.24
SLX4YLR135W VMA6P32366 345 aaKnown RBP1.04□□□□□ -2.24
SLX4YLR135W TKL2P33315 681 aa1.04□□□□□ -2.24
SLX4YLR135W VPS21P36017 210 aaKnown RBP1.04□□□□□ -2.24
SLX4YLR135W PRY2P36110 329 aa1.04□□□□□ -2.24
SLX4YLR135W TCD1P38756 429 aa1.04□□□□□ -2.24
SLX4YLR135W YIL059CP40520 121 aa1.04□□□□□ -2.24
SLX4YLR135W PFS2P42841 465 aaKnown RBP1.04□□□□□ -2.24
SLX4YLR135W ECO1P43605 281 aa1.04□□□□□ -2.24
SLX4YLR135W PGA2P53903 129 aa1.04□□□□□ -2.24
SLX4YLR135W CWC21Q03375 135 aaKnown RBP1.04□□□□□ -2.24
SLX4YLR135W FCF1Q05498 189 aaPredicted RBP1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms