RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W COS4P43542 379 aa2.01□□□□□ -2.09
SNU114YKL173W NBP35P52920 328 aa2.01□□□□□ -2.09
SNU114YKL173W YGL082WP53155 381 aa2.01□□□□□ -2.09
SNU114YKL173W GET1P53192 235 aa2.01□□□□□ -2.09
SNU114YKL173W TMA20P89886 181 aaPredicted RBP2.01□□□□□ -2.09
SNU114YKL173W PRM15Q03262 622 aa2.01□□□□□ -2.09
SNU114YKL173W SEC13Q04491 297 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W GPM2Q12008 311 aa2.01□□□□□ -2.09
SNU114YKL173W FCY22Q12119 530 aa2.01□□□□□ -2.09
SNU114YKL173W YER078W-AQ3E7A2 54 aa2.01□□□□□ -2.09
SNU114YKL173W TRP1P00912 224 aa2.01□□□□□ -2.09
SNU114YKL173W NMT1P14743 455 aa2.01□□□□□ -2.09
SNU114YKL173W MTF1P14908 341 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W MCK1P21965 375 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W MED8P38304 223 aa2.01□□□□□ -2.09
SNU114YKL173W YHR035WP38769 630 aa2.01□□□□□ -2.09
SNU114YKL173W YNL194CP40169 301 aa2.01□□□□□ -2.09
SNU114YKL173W JHD2P47156 728 aaPredicted RBP2.01□□□□□ -2.09
SNU114YKL173W UBC13P52490 153 aa2.01□□□□□ -2.09
SNU114YKL173W NIF3P53081 288 aa2.01□□□□□ -2.09
SNU114YKL173W VHT1P53241 593 aa2.01□□□□□ -2.09
SNU114YKL173W TPC1P53257 314 aa2.01□□□□□ -2.09
SNU114YKL173W WSC2P53832 503 aa2.01□□□□□ -2.09
SNU114YKL173W YPL077CQ02831 240 aa2.01□□□□□ -2.09
SNU114YKL173W YDL144CQ07589 356 aa2.01□□□□□ -2.09
SNU114YKL173W MIM1Q08176 113 aa2.01□□□□□ -2.09
SNU114YKL173W NSL1Q12143 216 aa2.01□□□□□ -2.09
SNU114YKL173W YRA1Q12159 226 aaKnown RBP2.01□□□□□ -2.09
SNU114YKL173W SWI1P09547 1314 aa2□□□□□ -2.09
SNU114YKL173W HTB1P02293 131 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W HTB2P02294 131 aa2□□□□□ -2.09
SNU114YKL173W COS2P0CX12 379 aa2□□□□□ -2.09
SNU114YKL173W COS3P0CX13 379 aa2□□□□□ -2.09
SNU114YKL173W RPL23AP0CX41 137 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W RPL23BP0CX42 137 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W NAM2P11325 894 aa2□□□□□ -2.09
SNU114YKL173W SPS100P13130 326 aa2□□□□□ -2.09
SNU114YKL173W YMR31P19955 123 aa2□□□□□ -2.09
SNU114YKL173W DAL82P21705 255 aa2□□□□□ -2.09
SNU114YKL173W DBF2P22204 572 aa2□□□□□ -2.09
SNU114YKL173W POF1P25576 258 aa2□□□□□ -2.09
SNU114YKL173W CPR3P25719 182 aa2□□□□□ -2.09
SNU114YKL173W ZRT1P32804 376 aa2□□□□□ -2.09
SNU114YKL173W TIP20P33891 701 aa2□□□□□ -2.09
SNU114YKL173W UTP11P34247 250 aaPredicted RBP2□□□□□ -2.09
SNU114YKL173W CPR5P35176 225 aa2□□□□□ -2.09
SNU114YKL173W YKL063CP35725 167 aa2□□□□□ -2.09
SNU114YKL173W ANR2P36090 516 aaPredicted RBP2□□□□□ -2.09
SNU114YKL173W MRX3P38172 270 aa2□□□□□ -2.09
SNU114YKL173W YBR062CP38239 180 aa2□□□□□ -2.09
SNU114YKL173W CYC2P38909 366 aa2□□□□□ -2.09
SNU114YKL173W SOK1P40317 901 aa2□□□□□ -2.09
SNU114YKL173W PMT4P46971 762 aa2□□□□□ -2.09
SNU114YKL173W YJR054WP47114 497 aa2□□□□□ -2.09
SNU114YKL173W NSA1P53136 463 aaPredicted RBP2□□□□□ -2.09
SNU114YKL173W IBD2P53892 351 aa2□□□□□ -2.09
SNU114YKL173W YLR460CP54007 376 aa2□□□□□ -2.09
SNU114YKL173W SNX41Q04053 625 aa2□□□□□ -2.09
SNU114YKL173W RIF2Q06208 395 aa2□□□□□ -2.09
SNU114YKL173W YOL019WQ08157 551 aa2□□□□□ -2.09
SNU114YKL173W RDL2Q08742 149 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W YPL225WQ08971 146 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W DAP1Q12091 152 aa2□□□□□ -2.09
SNU114YKL173W HMS1Q12398 434 aa2□□□□□ -2.09
SNU114YKL173W YBR121C-AP0C5L4 52 aa2□□□□□ -2.09
SNU114YKL173W SNA3P14359 133 aa2□□□□□ -2.09
SNU114YKL173W MUD1P32605 298 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W SWD2P36104 329 aaPredicted RBP2□□□□□ -2.09
SNU114YKL173W RCK1P38622 512 aa2□□□□□ -2.09
SNU114YKL173W IKI1P38874 309 aa2□□□□□ -2.09
SNU114YKL173W KRE9P39005 276 aa2□□□□□ -2.09
SNU114YKL173W UFE1P41834 346 aa2□□□□□ -2.09
SNU114YKL173W MGA1P53050 456 aa2□□□□□ -2.09
SNU114YKL173W YGL260WP53056 76 aa2□□□□□ -2.09
SNU114YKL173W YGL204CP53089 101 aa2□□□□□ -2.09
SNU114YKL173W ALG11P53954 548 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W RUB1Q03919 77 aa2□□□□□ -2.09
SNU114YKL173W YMR027WQ04371 470 aa2□□□□□ -2.09
SNU114YKL173W YPR091CQ06833 770 aa2□□□□□ -2.09
SNU114YKL173W RFU1Q08003 200 aa2□□□□□ -2.09
SNU114YKL173W RPN8Q08723 338 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W SLF1Q12034 447 aaKnown RBP2□□□□□ -2.09
SNU114YKL173W SNF8Q12483 233 aa2□□□□□ -2.09
SNU114YKL173W RSF2P46974 1380 aa2□□□□□ -2.09
SNU114YKL173W PDR11P40550 1411 aa1.99□□□□□ -2.09
SNU114YKL173W MDH3P32419 343 aaKnown RBP RIP-Chip data1.99□□□□□ -2.09not detected
SNU114YKL173W TCA17P32613 152 aa1.99□□□□□ -2.09
SNU114YKL173W YBR241CP38142 488 aa1.99□□□□□ -2.09
SNU114YKL173W YBR096WP38256 230 aa1.99□□□□□ -2.09
SNU114YKL173W DER1P38307 211 aa1.99□□□□□ -2.09
SNU114YKL173W MTC6P38849 526 aa1.99□□□□□ -2.09
SNU114YKL173W CHL4P38907 458 aa1.99□□□□□ -2.09
SNU114YKL173W YIL067CP40514 678 aa1.99□□□□□ -2.09
SNU114YKL173W TPN1P53099 579 aa1.99□□□□□ -2.09
SNU114YKL173W MSO1P53604 210 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W NUP49Q02199 472 aa1.99□□□□□ -2.09
SNU114YKL173W YML108WQ03759 105 aa1.99□□□□□ -2.09
SNU114YKL173W FAR10Q06001 478 aa1.99□□□□□ -2.09
SNU114YKL173W WTM1Q12363 437 aaKnown RBP1.99□□□□□ -2.09
SNU114YKL173W PET20Q99373 253 aa1.99□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms