RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABF1	YKL112W	YPR014C	Q6B0W2	109 aa		4.24	□□□□□ -1.73
ABF1	YKL112W	EPT1	P22140	391 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	MLF3	P32047	452 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	HIS2	P38635	335 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	ELO1	P39540	310 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	LSM4	P40070	187 aa	Known RBP	4.23	□□□□□ -1.73
ABF1	YKL112W	VHS2	P40463	436 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	YJR079W	P47126	109 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	COS10	P52924	374 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	ARO8	P53090	500 aa	Known RBP	4.23	□□□□□ -1.73
ABF1	YKL112W	APS2	Q00381	147 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	YMR315W	Q04869	349 aa	Known RBP	4.23	□□□□□ -1.73
ABF1	YKL112W	GAS2	Q06135	555 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	FCF2	Q12035	217 aa	Predicted RBP	4.23	□□□□□ -1.73
ABF1	YKL112W	SAS5	Q99314	248 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	IZH4	Q99393	312 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	BI3	Q9ZZW7	517 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	DIF1	O13577	133 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	CAR1	P00812	333 aa	Known RBP	4.23	□□□□□ -1.73
ABF1	YKL112W	CPR1	P14832	162 aa	Known RBP	4.23	□□□□□ -1.73
ABF1	YKL112W	STE4	P18851	423 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	SCO1	P23833	295 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	YKR041W	P36134	250 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	APL3	P38065	1025 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	ARN1	P38731	627 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	YAL037W	P39728	267 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	YER076C	P40049	302 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	DSE1	P40077	573 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	ARG2	P40360	574 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	PKR1	Q03880	122 aa	Known RBP	4.23	□□□□□ -1.73
ABF1	YKL112W	PRM6	Q04705	352 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
ABF1	YKL112W	FEX2	Q08991	375 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	YIL046W-A	Q3E7Z4	54 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	YBR182C-A	Q8TGU6	64 aa		4.23	□□□□□ -1.73
ABF1	YKL112W	RAS1	P01119	309 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	RPB8	P20436	146 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	MRPL9	P31334	269 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	RTC2	P38279	296 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	YPC1	P38298	316 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	BUD8	P41698	603 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	COS12	P53053	380 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	POP6	P53218	158 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	HSP31	Q04432	237 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	YLR407W	Q06070	228 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	YLR446W	Q06204	433 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	YLL056C	Q12177	298 aa		4.22	□□□□□ -1.73
ABF1	YKL112W	HRP1	Q99383	534 aa	Known RBP	4.22	□□□□□ -1.73
ABF1	YKL112W	SAL1	D6W196	494 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	SPS2	P08459	502 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	YFR010W-A	P0C5N0	62 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	LDS1	P31379	325 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	SEC17	P32602	292 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	IES6	P32617	166 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	KTI12	P34253	313 aa	Known RBP	4.21	□□□□□ -1.73
ABF1	YKL112W	FRE2	P36033	711 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	PRY2	P36110	329 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	ASC1	P38011	319 aa	Known RBP	4.21	□□□□□ -1.73
ABF1	YKL112W	ROT2	P38138	954 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	YJL193W	P39542	402 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	HEM14	P40012	539 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	YIL060W	P40519	144 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	GTS1	P40956	396 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	ASN2	P49090	572 aa	Known RBP	4.21	□□□□□ -1.73
ABF1	YKL112W	PHO23	P50947	330 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	ROG1	P53118	685 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	ERG13	P54839	491 aa	Known RBP	4.21	□□□□□ -1.73
ABF1	YKL112W	TPP1	Q03796	238 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	GRX8	Q05926	109 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	YLR050C	Q12155	161 aa	Known RBP	4.21	□□□□□ -1.73
ABF1	YKL112W	YDR018C	Q12185	396 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	GEP5	Q12393	293 aa		4.21	□□□□□ -1.73
ABF1	YKL112W	CHO1	P08456	276 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	PCL1	P24867	279 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	ELO2	P25358	347 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	YIH1	P25637	258 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	BUB3	P26449	341 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	TIR2	P33890	251 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	ATG12	P38316	186 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	YBR285W	P38354	144 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	CTK2	P46962	323 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	DAD3	P69850	94 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	DIG2	Q03373	323 aa	Known RBP	4.21	□□□□□ -1.74
ABF1	YKL112W	CGI121	Q03705	181 aa	Known RBP	4.21	□□□□□ -1.74
ABF1	YKL112W	YMR310C	Q04867	317 aa	Predicted RBP	4.21	□□□□□ -1.74
ABF1	YKL112W	DIC1	Q06143	298 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	BUD20	Q08004	166 aa	Predicted RBP	4.21	□□□□□ -1.74
ABF1	YKL112W	LDS2	Q08218	356 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	YOR283W	Q12040	230 aa	Known RBP	4.21	□□□□□ -1.74
ABF1	YKL112W	LPX1	Q12405	387 aa	Known RBP	4.21	□□□□□ -1.74
ABF1	YKL112W	YCR075W-A	Q3E830	75 aa		4.21	□□□□□ -1.74
ABF1	YKL112W	VAR1	P02381	398 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	MAG1	P22134	296 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	INO2	P26798	304 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	PMI40	P29952	429 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	RIM1	P32445	135 aa	Known RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	SLM6	P38343	150 aa		4.2	□□□□□ -1.74
ABF1	YKL112W	ARO9	P38840	513 aa	Predicted RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	PTI1	P39927	425 aa	Predicted RBP	4.2	□□□□□ -1.74
ABF1	YKL112W	FMP52	P40008	231 aa		4.2	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms