RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W YGL039WP53183 348 aaKnown RBP3.72□□□□□ -1.81
TFA1YKL028W JAC1P53193 184 aa3.72□□□□□ -1.81
TFA1YKL028W TPS1Q00764 495 aaKnown RBP3.72□□□□□ -1.81
TFA1YKL028W LOA1Q06508 300 aa3.72□□□□□ -1.81
TFA1YKL028W LSO2Q3E772 92 aaKnown RBP3.72□□□□□ -1.81
TFA1YKL028W MHP1P43638 1398 aa3.72□□□□□ -1.81
TFA1YKL028W CYC3P06182 269 aa3.71□□□□□ -1.82
TFA1YKL028W MET2P08465 486 aa3.71□□□□□ -1.82
TFA1YKL028W RPL4AP10664 362 aaKnown RBP3.71□□□□□ -1.82
TFA1YKL028W GIT1P25346 518 aa3.71□□□□□ -1.82
TFA1YKL028W NUF2P33895 451 aa3.71□□□□□ -1.82
TFA1YKL028W ECM13P38195 257 aa3.71□□□□□ -1.82
TFA1YKL028W HEM14P40012 539 aa3.71□□□□□ -1.82
TFA1YKL028W PAN6P40459 309 aa3.71□□□□□ -1.82
TFA1YKL028W RPL4BP49626 362 aaKnown RBP3.71□□□□□ -1.82
TFA1YKL028W SCS3P53012 380 aa3.71□□□□□ -1.82
TFA1YKL028W MSO1P53604 210 aaKnown RBP3.71□□□□□ -1.82
TFA1YKL028W NRM1P53718 249 aa3.71□□□□□ -1.82
TFA1YKL028W YMR279CQ03263 540 aa3.71□□□□□ -1.82
TFA1YKL028W SPG4Q04438 115 aa3.71□□□□□ -1.82
TFA1YKL028W SEI1Q06058 285 aa3.71□□□□□ -1.82
TFA1YKL028W GAS2Q06135 555 aa3.71□□□□□ -1.82
TFA1YKL028W RPN8Q08723 338 aaKnown RBP3.71□□□□□ -1.82
TFA1YKL028W NSL1Q12143 216 aa3.71□□□□□ -1.82
TFA1YKL028W USB1Q12208 290 aaKnown RBP3.71□□□□□ -1.82
TFA1YKL028W AYT1Q12226 474 aa3.71□□□□□ -1.82
TFA1YKL028W MRX4Q12467 430 aa3.71□□□□□ -1.82
TFA1YKL028W PET20Q99373 253 aa3.71□□□□□ -1.82
TFA1YKL028W YKR104WP0CE69 306 aa3.7□□□□□ -1.82
TFA1YKL028W YOL163WP0CF20 169 aa3.7□□□□□ -1.82
TFA1YKL028W SRY1P36007 326 aa3.7□□□□□ -1.82
TFA1YKL028W MRPL28P36527 147 aa3.7□□□□□ -1.82
TFA1YKL028W HAC1P41546 238 aa3.7□□□□□ -1.82
TFA1YKL028W YGL235WP53071 178 aa3.7□□□□□ -1.82
TFA1YKL028W TOS8P53147 276 aa3.7□□□□□ -1.82
TFA1YKL028W SHY1P53266 389 aa3.7□□□□□ -1.82
TFA1YKL028W SYF2P53277 215 aaPredicted RBP3.7□□□□□ -1.82
TFA1YKL028W YNR066CP53752 436 aa3.7□□□□□ -1.82
TFA1YKL028W UTP15Q04305 513 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W YHC1Q05900 231 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W GRX8Q05926 109 aa3.7□□□□□ -1.82
TFA1YKL028W NOC4Q06512 552 aaPredicted RBP3.7□□□□□ -1.82
TFA1YKL028W ATP16Q12165 160 aa3.7□□□□□ -1.82
TFA1YKL028W YPL245WQ12179 454 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W HMS1Q12398 434 aa3.7□□□□□ -1.82
TFA1YKL028W AGC1Q12482 902 aa3.7□□□□□ -1.82
TFA1YKL028W STE7P06784 515 aa3.7□□□□□ -1.82
TFA1YKL028W YFL068WP0CX99 160 aa3.7□□□□□ -1.82
TFA1YKL028W YLL066W-AP0CY00 160 aa3.7□□□□□ -1.82
TFA1YKL028W YLL067W-AP0CY01 160 aa3.7□□□□□ -1.82
TFA1YKL028W MRS3P10566 314 aa3.7□□□□□ -1.82
TFA1YKL028W DPM1P14020 267 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W DBF2P22204 572 aa3.7□□□□□ -1.82
TFA1YKL028W ATG15P25641 520 aa3.7□□□□□ -1.82
TFA1YKL028W URA10P30402 227 aa3.7□□□□□ -1.82
TFA1YKL028W TRS65P32893 560 aa3.7□□□□□ -1.82
TFA1YKL028W GPX1P36014 167 aa3.7□□□□□ -1.82
TFA1YKL028W HEK2P38199 381 aaKnown RBP RIP-Chip data3.7□□□□□ -1.82 RIP-Chip
TFA1YKL028W MBA1P38300 278 aa3.7□□□□□ -1.82
TFA1YKL028W LSM12P38828 187 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W GIM4P40005 111 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W YMR144WP40214 342 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W COG7P53195 279 aa3.7□□□□□ -1.82
TFA1YKL028W NUP49Q02199 472 aa3.7□□□□□ -1.82
TFA1YKL028W SDC1Q03323 175 aa3.7□□□□□ -1.82
TFA1YKL028W ECM11Q04110 302 aa3.7□□□□□ -1.82
TFA1YKL028W ERP1Q05359 219 aaKnown RBP3.7□□□□□ -1.82
TFA1YKL028W INM2Q05533 292 aa3.7□□□□□ -1.82
TFA1YKL028W RIF2Q06208 395 aa3.7□□□□□ -1.82
TFA1YKL028W MIM1Q08176 113 aa3.7□□□□□ -1.82
TFA1YKL028W EMP46Q12396 444 aa3.7□□□□□ -1.82
TFA1YKL028W CDC28P00546 298 aaKnown RBP3.69□□□□□ -1.82
TFA1YKL028W TRP1P00912 224 aa3.69□□□□□ -1.82
TFA1YKL028W ECM33P38248 429 aaKnown RBP3.69□□□□□ -1.82
TFA1YKL028W RPR2P40571 144 aa3.69□□□□□ -1.82
TFA1YKL028W MRPL49P40858 161 aaPredicted RBP3.69□□□□□ -1.82
TFA1YKL028W NCA3P46955 337 aa3.69□□□□□ -1.82
TFA1YKL028W CPR7P47103 393 aa3.69□□□□□ -1.82
TFA1YKL028W BXI1P48558 297 aa3.69□□□□□ -1.82
TFA1YKL028W SBH2P52871 88 aa3.69□□□□□ -1.82
TFA1YKL028W NQM1P53228 333 aaPredicted RBP3.69□□□□□ -1.82
TFA1YKL028W ABF2Q02486 183 aa3.69□□□□□ -1.82
TFA1YKL028W YML096WQ04489 525 aa3.69□□□□□ -1.82
TFA1YKL028W YMR315WQ04869 349 aaKnown RBP3.69□□□□□ -1.82
TFA1YKL028W FSH2Q05015 223 aa3.69□□□□□ -1.82
TFA1YKL028W YPR147CQ06522 304 aaKnown RBP3.69□□□□□ -1.82
TFA1YKL028W RRP40Q08285 240 aaKnown RBP3.69□□□□□ -1.82
TFA1YKL028W YLR050CQ12155 161 aaKnown RBP3.69□□□□□ -1.82
TFA1YKL028W ERV2Q12284 196 aa3.69□□□□□ -1.82
TFA1YKL028W SFM1Q12314 213 aa3.69□□□□□ -1.82
TFA1YKL028W HRT3Q12347 344 aa3.69□□□□□ -1.82
TFA1YKL028W COX5AP00424 153 aa3.68□□□□□ -1.82
TFA1YKL028W RPL15AP05748 204 aaKnown RBP3.68□□□□□ -1.82
TFA1YKL028W MSI1P13712 422 aa3.68□□□□□ -1.82
TFA1YKL028W GCN3P14741 305 aa3.68□□□□□ -1.82
TFA1YKL028W MGT1P26188 188 aa3.68□□□□□ -1.82
TFA1YKL028W LDS1P31379 325 aa3.68□□□□□ -1.82
TFA1YKL028W MRPL39P36533 70 aa3.68□□□□□ -1.82
TFA1YKL028W EDC3P39998 551 aaKnown RBP3.68□□□□□ -1.82
TFA1YKL028W RSM25P40496 264 aa3.68□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 19 ms