RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C HEM25Q07534 307 aa1.72□□□□□ -2.13
TRL1YJL087C RPN8Q08723 338 aaKnown RBP1.72□□□□□ -2.13
TRL1YJL087C YDR018CQ12185 396 aa1.72□□□□□ -2.13
TRL1YJL087C PPH21P23594 369 aa1.72□□□□□ -2.13
TRL1YJL087C VPH2P32341 215 aa1.72□□□□□ -2.13
TRL1YJL087C MED8P38304 223 aa1.72□□□□□ -2.13
TRL1YJL087C ARC40P38328 384 aaKnown RBP1.72□□□□□ -2.13
TRL1YJL087C SHG1P38337 142 aa1.72□□□□□ -2.13
TRL1YJL087C GRE3P38715 327 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
TRL1YJL087C YHR127WP38833 243 aaKnown RBP1.72□□□□□ -2.13
TRL1YJL087C SRP14P38985 146 aa1.72□□□□□ -2.13
TRL1YJL087C PAN6P40459 309 aa1.72□□□□□ -2.13
TRL1YJL087C PSA1P41940 361 aaKnown RBP1.72□□□□□ -2.13
TRL1YJL087C NCA3P46955 337 aa1.72□□□□□ -2.13
TRL1YJL087C JAC1P53193 184 aa1.72□□□□□ -2.13
TRL1YJL087C CLD1P53264 445 aa1.72□□□□□ -2.13
TRL1YJL087C CWC25P53854 179 aaKnown RBP1.72□□□□□ -2.13
TRL1YJL087C RRP17Q04031 235 aaPredicted RBP1.72□□□□□ -2.13
TRL1YJL087C YML096WQ04489 525 aa1.72□□□□□ -2.13
TRL1YJL087C FSH2Q05015 223 aa1.72□□□□□ -2.13
TRL1YJL087C RIF2Q06208 395 aa1.72□□□□□ -2.13
TRL1YJL087C TIR4Q12218 487 aaPredicted RBP1.72□□□□□ -2.13
TRL1YJL087C WTM1Q12363 437 aaKnown RBP1.72□□□□□ -2.13
TRL1YJL087C MRX4Q12467 430 aa1.72□□□□□ -2.13
TRL1YJL087C MHP1P43638 1398 aa1.71□□□□□ -2.13
TRL1YJL087C PUT1P09368 476 aa1.71□□□□□ -2.14
TRL1YJL087C YOL163WP0CF20 169 aa1.71□□□□□ -2.14
TRL1YJL087C CPR4P25334 318 aa1.71□□□□□ -2.14
TRL1YJL087C YCR043CP25361 127 aa1.71□□□□□ -2.14
TRL1YJL087C MEI4P29467 408 aa1.71□□□□□ -2.14
TRL1YJL087C LDS1P31379 325 aa1.71□□□□□ -2.14
TRL1YJL087C CSE2P33308 149 aa1.71□□□□□ -2.14
TRL1YJL087C MRPL28P36527 147 aa1.71□□□□□ -2.14
TRL1YJL087C FRM2P37261 193 aa1.71□□□□□ -2.14
TRL1YJL087C FIG1P38224 298 aa1.71□□□□□ -2.14
TRL1YJL087C WSC4P38739 605 aa1.71□□□□□ -2.14
TRL1YJL087C AVT7P40501 490 aa1.71□□□□□ -2.14
TRL1YJL087C GAB1P41733 394 aa1.71□□□□□ -2.14
TRL1YJL087C EGT2P42835 1041 aa1.71□□□□□ -2.14
TRL1YJL087C MMS2P53152 137 aa1.71□□□□□ -2.14
TRL1YJL087C WSC2P53832 503 aa1.71□□□□□ -2.14
TRL1YJL087C NRK1P53915 240 aa1.71□□□□□ -2.14
TRL1YJL087C YLR460CP54007 376 aa1.71□□□□□ -2.14
TRL1YJL087C YET2Q04210 160 aa1.71□□□□□ -2.14
TRL1YJL087C SPG4Q04438 115 aa1.71□□□□□ -2.14
TRL1YJL087C YLR281CQ05863 155 aa1.71□□□□□ -2.14
TRL1YJL087C YPL150WQ12152 901 aa1.71□□□□□ -2.14
TRL1YJL087C USB1Q12208 290 aaKnown RBP1.71□□□□□ -2.14
TRL1YJL087C TFC7Q12415 435 aa1.71□□□□□ -2.14
TRL1YJL087C SIR4P11978 1358 aa1.71□□□□□ -2.14
TRL1YJL087C STE7P06784 515 aa1.71□□□□□ -2.14
TRL1YJL087C QCR2P07257 368 aa1.71□□□□□ -2.14
TRL1YJL087C YKR104WP0CE69 306 aa1.71□□□□□ -2.14
TRL1YJL087C COS2P0CX12 379 aa1.71□□□□□ -2.14
TRL1YJL087C COS3P0CX13 379 aa1.71□□□□□ -2.14
TRL1YJL087C ASP3-2P0CX77 362 aa1.71□□□□□ -2.14
TRL1YJL087C ASP3-3P0CX78 362 aa1.71□□□□□ -2.14
TRL1YJL087C ASP3-4P0CX79 362 aa1.71□□□□□ -2.14
TRL1YJL087C ASP3-1P0CZ17 362 aa1.71□□□□□ -2.14
TRL1YJL087C CPT1P17898 393 aa1.71□□□□□ -2.14
TRL1YJL087C ERD2P18414 219 aa1.71□□□□□ -2.14
TRL1YJL087C YCR025CP25352 136 aa1.71□□□□□ -2.14
TRL1YJL087C CDC50P25656 391 aa1.71□□□□□ -2.14
TRL1YJL087C TRR1P29509 319 aaKnown RBP1.71□□□□□ -2.14
TRL1YJL087C YKR041WP36134 250 aa1.71□□□□□ -2.14
TRL1YJL087C DRE2P36152 348 aa1.71□□□□□ -2.14
TRL1YJL087C MRPL3P36516 390 aa1.71□□□□□ -2.14
TRL1YJL087C MRPL49P40858 161 aaPredicted RBP1.71□□□□□ -2.14
TRL1YJL087C COS4P43542 379 aa1.71□□□□□ -2.14
TRL1YJL087C ATG18P43601 500 aa1.71□□□□□ -2.14
TRL1YJL087C MIG2P53035 382 aa1.71□□□□□ -2.14
TRL1YJL087C YGL039WP53183 348 aaKnown RBP1.71□□□□□ -2.14
TRL1YJL087C CRH1P53301 507 aa1.71□□□□□ -2.14
TRL1YJL087C NRM1P53718 249 aa1.71□□□□□ -2.14
TRL1YJL087C FMP41P53889 259 aaKnown RBP1.71□□□□□ -2.14
TRL1YJL087C YDC1Q02896 317 aa1.71□□□□□ -2.14
TRL1YJL087C YMR279CQ03263 540 aa1.71□□□□□ -2.14
TRL1YJL087C YMR010WQ03687 405 aa1.71□□□□□ -2.14
TRL1YJL087C ARO80Q04052 950 aa1.71□□□□□ -2.14
TRL1YJL087C YOR186WQ08560 144 aa1.71□□□□□ -2.14
TRL1YJL087C YER078W-AQ3E7A2 54 aa1.71□□□□□ -2.14
TRL1YJL087C GRX2P17695 143 aaKnown RBP1.7□□□□□ -2.14
TRL1YJL087C SPS18P32572 300 aa1.7□□□□□ -2.14
TRL1YJL087C PEX2P32800 271 aa1.7□□□□□ -2.14
TRL1YJL087C SDH3P33421 198 aa1.7□□□□□ -2.14
TRL1YJL087C HEK2P38199 381 aaKnown RBP RIP-Chip data1.7□□□□□ -2.14not detected
TRL1YJL087C YJL213WP40896 331 aa1.7□□□□□ -2.14
TRL1YJL087C YJR056CP47115 236 aa1.7□□□□□ -2.14
TRL1YJL087C YGR015CP53208 328 aa1.7□□□□□ -2.14
TRL1YJL087C YNL046WP53956 172 aa1.7□□□□□ -2.14
TRL1YJL087C YPL113CQ02961 396 aa1.7□□□□□ -2.14
TRL1YJL087C YLR177WQ06251 628 aa1.7□□□□□ -2.14
TRL1YJL087C SRL1Q08673 210 aa1.7□□□□□ -2.14
TRL1YJL087C YOR376WQ08900 122 aa1.7□□□□□ -2.14
TRL1YJL087C GCY1P14065 312 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
TRL1YJL087C DBF2P22204 572 aa1.69□□□□□ -2.14
TRL1YJL087C YOX1P34161 385 aa1.69□□□□□ -2.14
TRL1YJL087C ASK1P35734 292 aa1.69□□□□□ -2.14
TRL1YJL087C ECM13P38195 257 aa1.69□□□□□ -2.14
TRL1YJL087C SHE1P38200 338 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 15.4 ms