RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W GLG2P47011 380 aa1.7□□□□□ -2.14
MSL1YIR009W IBA57P47158 497 aa1.7□□□□□ -2.14
MSL1YIR009W USE1P53146 245 aa1.7□□□□□ -2.14
MSL1YIR009W SDS23P53172 527 aa1.7□□□□□ -2.14
MSL1YIR009W GIM3P53900 129 aa1.7□□□□□ -2.14
MSL1YIR009W RHO3Q00245 231 aaKnown RBP1.7□□□□□ -2.14
MSL1YIR009W MRS2Q01926 470 aa1.7□□□□□ -2.14
MSL1YIR009W CTF19Q02732 369 aa1.7□□□□□ -2.14
MSL1YIR009W VPS60Q03390 229 aa1.7□□□□□ -2.14
MSL1YIR009W YML018CQ03730 393 aa1.7□□□□□ -2.14
MSL1YIR009W BNA7Q04066 261 aa1.7□□□□□ -2.14
MSL1YIR009W UTP15Q04305 513 aaKnown RBP1.7□□□□□ -2.14
MSL1YIR009W DCR2Q05924 578 aa1.7□□□□□ -2.14
MSL1YIR009W RPN8Q08723 338 aaKnown RBP1.7□□□□□ -2.14
MSL1YIR009W RRS1Q08746 203 aaKnown RBP1.7□□□□□ -2.14
MSL1YIR009W FOL3Q12676 427 aaPredicted RBP1.7□□□□□ -2.14
MSL1YIR009W GCN2P15442 1659 aa1.7□□□□□ -2.14
MSL1YIR009W YBT1P32386 1661 aa1.7□□□□□ -2.14
MSL1YIR009W COX4P04037 155 aa1.69□□□□□ -2.14
MSL1YIR009W POX1P13711 748 aa1.69□□□□□ -2.14
MSL1YIR009W MER1P16523 270 aa1.69□□□□□ -2.14
MSL1YIR009W RPL24BP24000 155 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W PBN1P25580 416 aa1.69□□□□□ -2.14
MSL1YIR009W SPS19P32573 292 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W PRP18P33411 251 aaPredicted RBP1.69□□□□□ -2.14
MSL1YIR009W YKL187CP34231 750 aa1.69□□□□□ -2.14
MSL1YIR009W SMP1P38128 452 aa1.69□□□□□ -2.14
MSL1YIR009W SHC1P39000 512 aa1.69□□□□□ -2.14
MSL1YIR009W NPT1P39683 429 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W KRE29P40026 464 aa1.69□□□□□ -2.14
MSL1YIR009W RRT13P40042 185 aa1.69□□□□□ -2.14
MSL1YIR009W JHD2P47156 728 aaPredicted RBP1.69□□□□□ -2.14
MSL1YIR009W PRP24P49960 444 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W YGL262WP53054 175 aa1.69□□□□□ -2.14
MSL1YIR009W YPL113CQ02961 396 aa1.69□□□□□ -2.14
MSL1YIR009W PEX10Q05568 337 aa1.69□□□□□ -2.14
MSL1YIR009W ATG38Q05789 226 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W YLR283WQ05867 314 aa1.69□□□□□ -2.14
MSL1YIR009W SSQ1Q05931 657 aaPredicted RBP1.69□□□□□ -2.14
MSL1YIR009W ARC18Q05933 178 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W SEC10Q06245 871 aa1.69□□□□□ -2.14
MSL1YIR009W YPR172WQ06608 200 aa1.69□□□□□ -2.14
MSL1YIR009W MCH1Q07376 486 aa1.69□□□□□ -2.14
MSL1YIR009W PLB3Q08108 686 aa1.69□□□□□ -2.14
MSL1YIR009W YRA1Q12159 226 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W SME1Q12330 94 aaPredicted RBP1.69□□□□□ -2.14
MSL1YIR009W RAX2Q12465 1220 aa1.69□□□□□ -2.14
MSL1YIR009W YOS9Q99220 542 aa1.69□□□□□ -2.14
MSL1YIR009W VTH1P40438 1549 aa1.69□□□□□ -2.14
MSL1YIR009W VTH2P40890 1549 aa1.69□□□□□ -2.14
MSL1YIR009W PRP8P33334 2413 aaKnown RBP1.69□□□□□ -2.14
MSL1YIR009W TEL1P38110 2787 aa1.69□□□□□ -2.14
MSL1YIR009W YAL064W-BO13512 126 aa1.68□□□□□ -2.14
MSL1YIR009W FUS3P16892 353 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W CBF1P17106 351 aa1.68□□□□□ -2.14
MSL1YIR009W STE18P18852 110 aa1.68□□□□□ -2.14
MSL1YIR009W YMR31P19955 123 aa1.68□□□□□ -2.14
MSL1YIR009W MRPL25P23369 157 aa1.68□□□□□ -2.14
MSL1YIR009W ATG15P25641 520 aa1.68□□□□□ -2.14
MSL1YIR009W RPS5P26783 225 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W CAM1P29547 415 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W ZIP1P31111 875 aa1.68□□□□□ -2.14
MSL1YIR009W TPS2P31688 896 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W VMA6P32366 345 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W AEP1P32493 518 aa1.68□□□□□ -2.14
MSL1YIR009W MGM101P32787 269 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W SGE1P33335 543 aa1.68□□□□□ -2.14
MSL1YIR009W ZRT3P34240 503 aa1.68□□□□□ -2.14
MSL1YIR009W AIM29P36154 155 aa1.68□□□□□ -2.14
MSL1YIR009W RIB1P38066 345 aa1.68□□□□□ -2.14
MSL1YIR009W MRX3P38172 270 aa1.68□□□□□ -2.14
MSL1YIR009W MBA1P38300 278 aa1.68□□□□□ -2.14
MSL1YIR009W SEO1P39709 593 aa1.68□□□□□ -2.14
MSL1YIR009W HOC1P47124 396 aa1.68□□□□□ -2.14
MSL1YIR009W PGU1P47180 361 aa1.68□□□□□ -2.14
MSL1YIR009W RAD17P48581 401 aa1.68□□□□□ -2.14
MSL1YIR009W HSH155P49955 971 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W IGO1P53897 168 aa1.68□□□□□ -2.14
MSL1YIR009W SWS2P53937 143 aa1.68□□□□□ -2.14
MSL1YIR009W MRPS16Q02608 121 aa1.68□□□□□ -2.14
MSL1YIR009W TRM44Q02648 567 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W KRE28Q04431 385 aa1.68□□□□□ -2.14
MSL1YIR009W YPR098CQ06089 161 aa1.68□□□□□ -2.14
MSL1YIR009W SPO77Q06134 477 aa1.68□□□□□ -2.14
MSL1YIR009W IES4Q08561 116 aa1.68□□□□□ -2.14
MSL1YIR009W SNU23Q12368 194 aaPredicted RBP1.68□□□□□ -2.14
MSL1YIR009W YAL067W-AQ8TGK6 75 aa1.68□□□□□ -2.14
MSL1YIR009W FKS1P38631 1876 aaKnown RBP1.68□□□□□ -2.14
MSL1YIR009W SIR4P11978 1358 aa1.68□□□□□ -2.14
MSL1YIR009W TY1B-HO13535 1793 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-DR5P0C2I2 1755 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-DR6P0C2I3 1755 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-LR2P0C2I5 1755 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-LR3P0C2I6 1755 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W TY1B-PR1P0C2I9 1755 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W TY1B-PR2P0C2J0 1756 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-PR3P0C2J1 1755 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W TY1B-JR1P47098 1755 aa1.67□□□□□ -2.14
MSL1YIR009W TY1B-ML2Q03434 1755 aaKnown RBP1.67□□□□□ -2.14
MSL1YIR009W TY1B-ER1Q03612 1755 aa1.67□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 26.9 ms