RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W MSS116P15424 664 aaKnown RBP2.02□□□□□ -2.09
SEC28YIL076W END3P39013 349 aa2.02□□□□□ -2.09
SEC28YIL076W DPP1Q05521 289 aa2.02□□□□□ -2.09
SEC28YIL076W SPO77Q06134 477 aa2.02□□□□□ -2.09
SEC28YIL076W YOR114WQ12219 294 aa2.02□□□□□ -2.09
SEC28YIL076W YHR086W-AQ3E746 53 aa2.02□□□□□ -2.09
SEC28YIL076W RPO41P13433 1351 aaKnown RBP2.01□□□□□ -2.09
SEC28YIL076W COT1P32798 439 aa2.01□□□□□ -2.09
SEC28YIL076W SWD2P36104 329 aaPredicted RBP2.01□□□□□ -2.09
SEC28YIL076W POP8P38208 133 aa2.01□□□□□ -2.09
SEC28YIL076W PHO89P38361 574 aa2.01□□□□□ -2.09
SEC28YIL076W SHQ1P40486 507 aaPredicted RBP2.01□□□□□ -2.09
SEC28YIL076W YPT32P51996 222 aaKnown RBP2.01□□□□□ -2.09
SEC28YIL076W SLM2P53955 656 aa2.01□□□□□ -2.09
SEC28YIL076W YLR297WQ05899 129 aa2.01□□□□□ -2.09
SEC28YIL076W YOR268CQ08734 132 aa2.01□□□□□ -2.09
SEC28YIL076W YLR419WQ06698 1435 aaKnown RBP2□□□□□ -2.09
SEC28YIL076W CAR2P07991 424 aaKnown RBP2□□□□□ -2.09
SEC28YIL076W ATG15P25641 520 aa2□□□□□ -2.09
SEC28YIL076W MPP10P47083 593 aaKnown RBP2□□□□□ -2.09
SEC28YIL076W MND1P53102 219 aa2□□□□□ -2.09
SEC28YIL076W YPL039WQ03080 316 aa2□□□□□ -2.09
SEC28YIL076W YPL150WQ12152 901 aa2□□□□□ -2.09
SEC28YIL076W ISD11Q6Q560 94 aa2□□□□□ -2.09
SEC28YIL076W ADH3P07246 375 aaKnown RBP1.99□□□□□ -2.09
SEC28YIL076W ERG2P32352 222 aa1.99□□□□□ -2.09
SEC28YIL076W KRE6P32486 720 aa1.99□□□□□ -2.09
SEC28YIL076W SWI3P32591 825 aa1.99□□□□□ -2.09
SEC28YIL076W CAT2P32796 670 aaKnown RBP1.99□□□□□ -2.09
SEC28YIL076W POP2P39008 433 aa1.99□□□□□ -2.09
SEC28YIL076W YML018CQ03730 393 aa1.99□□□□□ -2.09
SEC28YIL076W YOL019WQ08157 551 aa1.99□□□□□ -2.09
SEC28YIL076W RTC5Q12108 567 aaKnown RBP1.99□□□□□ -2.09
SEC28YIL076W RIM15P43565 1770 aa1.99□□□□□ -2.09
SEC28YIL076W SIR4P11978 1358 aa1.98□□□□□ -2.09
SEC28YIL076W YEL009C-AA0A023PZF2 135 aa1.98□□□□□ -2.09
SEC28YIL076W RAD10P06838 210 aa1.98□□□□□ -2.09
SEC28YIL076W RPL5P26321 297 aaKnown RBP1.98□□□□□ -2.09
SEC28YIL076W RPC37P36121 282 aa1.98□□□□□ -2.09
SEC28YIL076W YHR045WP38775 560 aa1.98□□□□□ -2.09
SEC28YIL076W COX16P47081 118 aa1.98□□□□□ -2.09
SEC28YIL076W RIB4P50861 169 aaPredicted RBP1.98□□□□□ -2.09
SEC28YIL076W COG7P53195 279 aa1.98□□□□□ -2.09
SEC28YIL076W YMR209CQ03648 457 aa1.98□□□□□ -2.09
SEC28YIL076W VPS20Q04272 221 aa1.98□□□□□ -2.09
SEC28YIL076W YBL112CQ3E7Y4 105 aa1.98□□□□□ -2.09
SEC28YIL076W TOM40P23644 387 aaKnown RBP1.97□□□□□ -2.09
SEC28YIL076W PET18P25362 215 aa1.97□□□□□ -2.09
SEC28YIL076W SUA5P32579 426 aa1.97□□□□□ -2.09
SEC28YIL076W RPS0AP32905 252 aaKnown RBP1.97□□□□□ -2.09
SEC28YIL076W SPT4P32914 102 aaPredicted RBP1.97□□□□□ -2.09
SEC28YIL076W YKL063CP35725 167 aa1.97□□□□□ -2.09
SEC28YIL076W SSO2P39926 295 aa1.97□□□□□ -2.09
SEC28YIL076W YJL027CP47063 138 aaPredicted RBP1.97□□□□□ -2.09
SEC28YIL076W CAB4P53332 305 aa1.97□□□□□ -2.09
SEC28YIL076W COS6P53344 381 aa1.97□□□□□ -2.09
SEC28YIL076W DBP6P53734 629 aaKnown RBP1.97□□□□□ -2.09
SEC28YIL076W DCR2Q05924 578 aa1.97□□□□□ -2.09
SEC28YIL076W FCY21P40039 528 aa1.96□□□□□ -2.1
SEC28YIL076W YDR286CQ05530 114 aa1.96□□□□□ -2.1
SEC28YIL076W ASR1Q06834 288 aa1.96□□□□□ -2.1
SEC28YIL076W SIA1Q12212 622 aa1.96□□□□□ -2.1
SEC28YIL076W FAS2P19097 1887 aaKnown RBP1.95□□□□□ -2.1
SEC28YIL076W MLP1Q02455 1875 aaKnown RBP1.95□□□□□ -2.1
SEC28YIL076W TDH1P00360 332 aaKnown RBP1.95□□□□□ -2.1
SEC28YIL076W TFS1P14306 219 aa1.95□□□□□ -2.1
SEC28YIL076W BMH1P29311 267 aaKnown RBP1.95□□□□□ -2.1
SEC28YIL076W GRE3P38715 327 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
SEC28YIL076W COG3P40094 801 aa1.95□□□□□ -2.1
SEC28YIL076W CDC40P40968 455 aaPredicted RBP1.95□□□□□ -2.1
SEC28YIL076W YPL077CQ02831 240 aa1.95□□□□□ -2.1
SEC28YIL076W PET494P07390 489 aaPredicted RBP1.94□□□□□ -2.1
SEC28YIL076W ARN2P38724 620 aa1.94□□□□□ -2.1
SEC28YIL076W SHC1P39000 512 aa1.94□□□□□ -2.1
SEC28YIL076W YIA6P40556 373 aa1.94□□□□□ -2.1
SEC28YIL076W FMP41P53889 259 aaKnown RBP1.94□□□□□ -2.1
SEC28YIL076W ECM18Q04623 453 aa1.94□□□□□ -2.1
SEC28YIL076W EMC6Q12431 108 aa1.94□□□□□ -2.1
SEC28YIL076W NOT5Q12514 560 aaPredicted RBP1.94□□□□□ -2.1
SEC28YIL076W ICL1P28240 557 aaPredicted RBP1.93□□□□□ -2.1
SEC28YIL076W BLI1P35727 113 aa1.93□□□□□ -2.1
SEC28YIL076W MRPL49P40858 161 aaPredicted RBP1.93□□□□□ -2.1
SEC28YIL076W GON7P46984 123 aa1.93□□□□□ -2.1
SEC28YIL076W YJL016WP47072 561 aa1.93□□□□□ -2.1
SEC28YIL076W ABZ2Q03266 374 aa1.93□□□□□ -2.1
SEC28YIL076W VPS60Q03390 229 aa1.93□□□□□ -2.1
SEC28YIL076W PGC1Q08959 321 aa1.93□□□□□ -2.1
SEC28YIL076W POM33Q12164 279 aa1.93□□□□□ -2.1
SEC28YIL076W ATP6P00854 259 aa1.92□□□□□ -2.1
SEC28YIL076W YFR054CP43622 192 aa1.92□□□□□ -2.1
SEC28YIL076W LOH1P47055 219 aa1.92□□□□□ -2.1
SEC28YIL076W GTO1P48239 356 aa1.92□□□□□ -2.1
SEC28YIL076W PMD1P32634 1753 aa1.92□□□□□ -2.1
SEC28YIL076W VPS13Q07878 3144 aa1.91□□□□□ -2.1
SEC28YIL076W UTP10P42945 1769 aaKnown RBP1.91□□□□□ -2.1
SEC28YIL076W CSG2P35206 410 aa1.91□□□□□ -2.1
SEC28YIL076W YHI9P38765 294 aa1.91□□□□□ -2.1
SEC28YIL076W VOA1P53262 265 aa1.91□□□□□ -2.1
SEC28YIL076W YMR114CQ04471 368 aaKnown RBP1.91□□□□□ -2.1
SEC28YIL076W TAF9Q05027 157 aa1.91□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms