RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W RPS4AP0CX35 261 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W RPS4BP0CX36 261 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W CDC34P14682 295 aa5.39□□□□□ -1.55
SKN1YGR143W SEC17P32602 292 aa5.39□□□□□ -1.55
SKN1YGR143W GEX2P36173 615 aa5.39□□□□□ -1.55
SKN1YGR143W MRPL11P36521 249 aaPredicted RBP5.39□□□□□ -1.55
SKN1YGR143W CBP4P37267 147 aa5.39□□□□□ -1.55
SKN1YGR143W YHR127WP38833 243 aaKnown RBP5.39□□□□□ -1.55
SKN1YGR143W IME4P41833 600 aa5.39□□□□□ -1.55
SKN1YGR143W IKS1P47042 667 aa5.39□□□□□ -1.55
SKN1YGR143W YMR160WQ03823 816 aa5.39□□□□□ -1.55
SKN1YGR143W YET3Q07451 203 aa5.39□□□□□ -1.55
SKN1YGR143W NBP2Q12163 236 aa5.39□□□□□ -1.55
SKN1YGR143W RGT2Q12300 763 aa5.39□□□□□ -1.55
SKN1YGR143W EAF3Q12432 401 aa5.39□□□□□ -1.55
SKN1YGR143W CTF3Q12748 733 aa5.39□□□□□ -1.55
SKN1YGR143W THP2O13539 261 aaKnown RBP5.38□□□□□ -1.55
SKN1YGR143W EST1P17214 699 aaPredicted RBP5.38□□□□□ -1.55
SKN1YGR143W PPZ1P26570 692 aa5.38□□□□□ -1.55
SKN1YGR143W YHL044WP38727 235 aa5.38□□□□□ -1.55
SKN1YGR143W MAF1P41910 395 aa5.38□□□□□ -1.55
SKN1YGR143W TAD2P47058 250 aa5.38□□□□□ -1.55
SKN1YGR143W STE24P47154 453 aa5.38□□□□□ -1.55
SKN1YGR143W RIB4P50861 169 aaPredicted RBP5.38□□□□□ -1.55
SKN1YGR143W EXG2P52911 562 aa5.38□□□□□ -1.55
SKN1YGR143W GPD1Q00055 391 aaKnown RBP5.38□□□□□ -1.55
SKN1YGR143W YML018CQ03730 393 aa5.38□□□□□ -1.55
SKN1YGR143W YLR446WQ06204 433 aa5.38□□□□□ -1.55
SKN1YGR143W PRP11Q07350 266 aaPredicted RBP5.38□□□□□ -1.55
SKN1YGR143W IRC13Q08630 104 aa5.38□□□□□ -1.55
SKN1YGR143W FCY22Q12119 530 aa5.38□□□□□ -1.55
SKN1YGR143W YRA1Q12159 226 aaKnown RBP5.38□□□□□ -1.55
SKN1YGR143W USB1Q12208 290 aaKnown RBP5.38□□□□□ -1.55
SKN1YGR143W CYC1P00044 109 aaPredicted RBP5.37□□□□□ -1.55
SKN1YGR143W CUP2P15315 225 aa5.37□□□□□ -1.55
SKN1YGR143W SNF5P18480 905 aa5.37□□□□□ -1.55
SKN1YGR143W SGF29P25554 259 aa5.37□□□□□ -1.55
SKN1YGR143W MGT1P26188 188 aa5.37□□□□□ -1.55
SKN1YGR143W MSK1P32048 576 aa5.37□□□□□ -1.55
SKN1YGR143W OXA1P39952 402 aa5.37□□□□□ -1.55
SKN1YGR143W PIC2P40035 300 aa5.37□□□□□ -1.55
SKN1YGR143W RPA43P46669 326 aa5.37□□□□□ -1.55
SKN1YGR143W SFH5P47008 294 aa5.37□□□□□ -1.55
SKN1YGR143W YIP4P53093 235 aa5.37□□□□□ -1.55
SKN1YGR143W YGL114WP53134 725 aa5.37□□□□□ -1.55
SKN1YGR143W AAH1P53909 347 aa5.37□□□□□ -1.55
SKN1YGR143W YNL033WP53964 284 aa5.37□□□□□ -1.55
SKN1YGR143W YNL019CP53975 284 aa5.37□□□□□ -1.55
SKN1YGR143W RHO4Q00246 291 aa5.37□□□□□ -1.55
SKN1YGR143W TPS1Q00764 495 aaKnown RBP5.37□□□□□ -1.55
SKN1YGR143W YMR315WQ04869 349 aaKnown RBP5.37□□□□□ -1.55
SKN1YGR143W YPR109WQ06104 294 aa5.37□□□□□ -1.55
SKN1YGR143W ALG6Q12001 544 aaKnown RBP5.37□□□□□ -1.55
SKN1YGR143W UPC2Q12151 913 aa5.37□□□□□ -1.55
SKN1YGR143W RTN2Q12443 393 aa5.37□□□□□ -1.55
SKN1YGR143W SPE1P08432 466 aa5.37□□□□□ -1.55
SKN1YGR143W YPR170W-BP0C5R9 85 aa5.37□□□□□ -1.55
SKN1YGR143W ERS1P17261 260 aa5.37□□□□□ -1.55
SKN1YGR143W KAR4P25583 335 aa5.37□□□□□ -1.55
SKN1YGR143W HXT4P32467 576 aa5.37□□□□□ -1.55
SKN1YGR143W EMP24P32803 203 aaKnown RBP5.37□□□□□ -1.55
SKN1YGR143W SRP14P38985 146 aa5.37□□□□□ -1.55
SKN1YGR143W YEL068CP39977 110 aa5.37□□□□□ -1.55
SKN1YGR143W SYS1P41544 203 aa5.37□□□□□ -1.55
SKN1YGR143W STR3P53101 465 aaKnown RBP5.37□□□□□ -1.55
SKN1YGR143W SCW11P53189 542 aa5.37□□□□□ -1.55
SKN1YGR143W YGR053CP53234 283 aa5.37□□□□□ -1.55
SKN1YGR143W YNR014WP53719 212 aa5.37□□□□□ -1.55
SKN1YGR143W TVP15Q03860 143 aa5.37□□□□□ -1.55
SKN1YGR143W MTQ2Q03920 221 aaPredicted RBP5.37□□□□□ -1.55
SKN1YGR143W YDR415CQ04033 374 aaPredicted RBP5.37□□□□□ -1.55
SKN1YGR143W IRC10Q08118 586 aa5.37□□□□□ -1.55
SKN1YGR143W DAP1Q12091 152 aa5.37□□□□□ -1.55
SKN1YGR143W YOL163WP0CF20 169 aa5.36□□□□□ -1.55
SKN1YGR143W NHP6BP11633 99 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W SPT15P13393 240 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W YCL068CP25593 260 aa5.36□□□□□ -1.55
SKN1YGR143W IDH2P28241 369 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W YEF1P32622 495 aa5.36□□□□□ -1.55
SKN1YGR143W TMA19P35691 167 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W SHU2P38957 223 aa5.36□□□□□ -1.55
SKN1YGR143W PAC2P39937 518 aa5.36□□□□□ -1.55
SKN1YGR143W RPL34BP40525 121 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W SDH7Q04401 133 aa5.36□□□□□ -1.55
SKN1YGR143W ENT4Q07872 247 aa5.36□□□□□ -1.55
SKN1YGR143W COQ10Q08058 207 aa5.36□□□□□ -1.55
SKN1YGR143W YOL131WQ08270 108 aa5.36□□□□□ -1.55
SKN1YGR143W NAT5Q08689 176 aa5.36□□□□□ -1.55
SKN1YGR143W CAR1P00812 333 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W YFL068WP0CX99 160 aa5.36□□□□□ -1.55
SKN1YGR143W YLL066W-AP0CY00 160 aa5.36□□□□□ -1.55
SKN1YGR143W YLL067W-AP0CY01 160 aa5.36□□□□□ -1.55
SKN1YGR143W ART10P18634 518 aaKnown RBP5.36□□□□□ -1.55
SKN1YGR143W PEX34P25584 144 aa5.36□□□□□ -1.55
SKN1YGR143W YCR061WP25639 631 aa5.36□□□□□ -1.55
SKN1YGR143W SYN8P31377 255 aa5.36□□□□□ -1.55
SKN1YGR143W DOG2P38773 246 aa5.36□□□□□ -1.55
SKN1YGR143W YEA6P39953 335 aa5.36□□□□□ -1.55
SKN1YGR143W CAK1P43568 368 aaPredicted RBP5.36□□□□□ -1.55
SKN1YGR143W HIT1P46973 164 aa5.36□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms