RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C YDL057WQ07379 328 aa2.88□□□□□ -1.95
XRN1YGL173C MMT2Q08970 484 aa2.88□□□□□ -1.95
XRN1YGL173C YOR012WQ12351 137 aa2.88□□□□□ -1.95
XRN1YGL173C TRM10Q12400 293 aa2.88□□□□□ -1.95
XRN1YGL173C RDI1Q12434 202 aa2.88□□□□□ -1.95
XRN1YGL173C LAA1P39526 2014 aa2.88□□□□□ -1.95
XRN1YGL173C HTB1P02293 131 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C HTB2P02294 131 aa2.88□□□□□ -1.95
XRN1YGL173C FBA1P14540 359 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C SAM2P19358 384 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C EXG1P23776 448 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C CAF4P36130 643 aa2.88□□□□□ -1.95
XRN1YGL173C YCR041WP37265 110 aa2.88□□□□□ -1.95
XRN1YGL173C FIG1P38224 298 aa2.88□□□□□ -1.95
XRN1YGL173C OPY1P38271 328 aa2.88□□□□□ -1.95
XRN1YGL173C MBA1P38300 278 aa2.88□□□□□ -1.95
XRN1YGL173C AME1P38313 324 aa2.88□□□□□ -1.95
XRN1YGL173C TRM5P38793 499 aa2.88□□□□□ -1.95
XRN1YGL173C PTI1P39927 425 aaPredicted RBP2.88□□□□□ -1.95
XRN1YGL173C AIM24P47127 394 aa2.88□□□□□ -1.95
XRN1YGL173C YPL062WQ02781 134 aa2.88□□□□□ -1.95
XRN1YGL173C VHS1Q03785 461 aa2.88□□□□□ -1.95
XRN1YGL173C LOA1Q06508 300 aa2.88□□□□□ -1.95
XRN1YGL173C UTP23Q12339 254 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C JLP1Q12358 412 aa2.88□□□□□ -1.95
XRN1YGL173C TOR2P32600 2474 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C TOR1P35169 2470 aa2.88□□□□□ -1.95
XRN1YGL173C RPL4AP10664 362 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C YMC1P32331 307 aa2.88□□□□□ -1.95
XRN1YGL173C IES6P32617 166 aa2.88□□□□□ -1.95
XRN1YGL173C YFL064CP43540 174 aa2.88□□□□□ -1.95
XRN1YGL173C RPL4BP49626 362 aaKnown RBP2.88□□□□□ -1.95
XRN1YGL173C NRK1P53915 240 aa2.88□□□□□ -1.95
XRN1YGL173C NOC4Q06512 552 aaPredicted RBP2.88□□□□□ -1.95
XRN1YGL173C RRI1Q12468 440 aa2.88□□□□□ -1.95
XRN1YGL173C WIP1Q2V2P8 89 aa2.88□□□□□ -1.95
XRN1YGL173C MIR1P23641 311 aaKnown RBP2.87□□□□□ -1.95
XRN1YGL173C CNB1P25296 175 aa2.87□□□□□ -1.95
XRN1YGL173C RPL16BP26785 198 aaKnown RBP2.87□□□□□ -1.95
XRN1YGL173C SGE1P33335 543 aa2.87□□□□□ -1.95
XRN1YGL173C YBR056WP38081 501 aa2.87□□□□□ -1.95
XRN1YGL173C MOH1P38191 138 aa2.87□□□□□ -1.95
XRN1YGL173C YHK8P38776 514 aa2.87□□□□□ -1.95
XRN1YGL173C YJR054WP47114 497 aa2.87□□□□□ -1.95
XRN1YGL173C CPD1P53314 239 aa2.87□□□□□ -1.95
XRN1YGL173C MSO1P53604 210 aaKnown RBP2.87□□□□□ -1.95
XRN1YGL173C RPL15BP54780 204 aaPredicted RBP2.87□□□□□ -1.95
XRN1YGL173C ARO80Q04052 950 aa2.87□□□□□ -1.95
XRN1YGL173C EAF3Q12432 401 aa2.87□□□□□ -1.95
XRN1YGL173C AGC1Q12482 902 aa2.87□□□□□ -1.95
XRN1YGL173C ASP3-2P0CX77 362 aa2.87□□□□□ -1.95
XRN1YGL173C ASP3-3P0CX78 362 aa2.87□□□□□ -1.95
XRN1YGL173C ASP3-4P0CX79 362 aa2.87□□□□□ -1.95
XRN1YGL173C ASP3-1P0CZ17 362 aa2.87□□□□□ -1.95
XRN1YGL173C POF1P25576 258 aa2.87□□□□□ -1.95
XRN1YGL173C ZRT1P32804 376 aa2.87□□□□□ -1.95
XRN1YGL173C CSE2P33308 149 aa2.87□□□□□ -1.95
XRN1YGL173C AST1P35183 429 aa2.87□□□□□ -1.95
XRN1YGL173C FRE2P36033 711 aa2.87□□□□□ -1.95
XRN1YGL173C YPT35P38815 214 aaKnown RBP2.87□□□□□ -1.95
XRN1YGL173C MOB1P40484 314 aa2.87□□□□□ -1.95
XRN1YGL173C SKI6P46948 246 aaPredicted RBP2.87□□□□□ -1.95
XRN1YGL173C CPR7P47103 393 aa2.87□□□□□ -1.95
XRN1YGL173C ILM1P47155 203 aa2.87□□□□□ -1.95
XRN1YGL173C SLX9P53251 210 aaPredicted RBP2.87□□□□□ -1.95
XRN1YGL173C TRM82Q03774 444 aa2.87□□□□□ -1.95
XRN1YGL173C YDL218WQ07629 317 aa2.87□□□□□ -1.95
XRN1YGL173C MAG1P22134 296 aaKnown RBP2.87□□□□□ -1.95
XRN1YGL173C DEG1P31115 442 aaKnown RBP2.87□□□□□ -1.95
XRN1YGL173C TOD6P34219 525 aa2.87□□□□□ -1.95
XRN1YGL173C SUL1P38359 859 aa2.87□□□□□ -1.95
XRN1YGL173C MED6P38782 295 aa2.87□□□□□ -1.95
XRN1YGL173C VPS52P39904 641 aa2.87□□□□□ -1.95
XRN1YGL173C OXA1P39952 402 aa2.87□□□□□ -1.95
XRN1YGL173C EDC3P39998 551 aaKnown RBP2.87□□□□□ -1.95
XRN1YGL173C BMT5P40493 336 aa2.87□□□□□ -1.95
XRN1YGL173C YJR056CP47115 236 aa2.87□□□□□ -1.95
XRN1YGL173C ERP3Q12403 225 aa2.87□□□□□ -1.95
XRN1YGL173C MED8P38304 223 aa2.86□□□□□ -1.95
XRN1YGL173C MAM33P40513 266 aa2.86□□□□□ -1.95
XRN1YGL173C IKS1P47042 667 aa2.86□□□□□ -1.95
XRN1YGL173C SCS7Q03529 384 aa2.86□□□□□ -1.95
XRN1YGL173C YLR031WQ07978 186 aa2.86□□□□□ -1.95
XRN1YGL173C RPS3P05750 240 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C RPS18AP0CX55 146 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C RPS18BP0CX56 146 aaPredicted RBP2.86□□□□□ -1.95
XRN1YGL173C MRS3P10566 314 aa2.86□□□□□ -1.95
XRN1YGL173C PRO3P32263 286 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C CAT2P32796 670 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C ARC40P38328 384 aaKnown RBP2.86□□□□□ -1.95
XRN1YGL173C PCL5P38794 229 aa2.86□□□□□ -1.95
XRN1YGL173C YIL152WP40455 235 aa2.86□□□□□ -1.95
XRN1YGL173C UBC12P52491 188 aa2.86□□□□□ -1.95
XRN1YGL173C MTQ1P53944 314 aa2.86□□□□□ -1.95
XRN1YGL173C COG5P53951 403 aa2.86□□□□□ -1.95
XRN1YGL173C YNL040WP53960 456 aaPredicted RBP2.86□□□□□ -1.95
XRN1YGL173C YPD1Q07688 167 aa2.86□□□□□ -1.95
XRN1YGL173C BBP1Q12365 385 aa2.86□□□□□ -1.95
XRN1YGL173C HEM15P16622 393 aa2.86□□□□□ -1.95
XRN1YGL173C PTP1P25044 335 aa2.86□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms