RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W ALG11P53954 548 aaKnown RBP2.34□□□□□ -2.03
LSM4YER112W CDC14Q00684 551 aa2.34□□□□□ -2.03
LSM4YER112W OST6Q03723 332 aa2.34□□□□□ -2.03
LSM4YER112W YMR166CQ03829 368 aa2.34□□□□□ -2.03
LSM4YER112W COX20Q04935 205 aa2.34□□□□□ -2.03
LSM4YER112W AGC1Q12482 902 aa2.34□□□□□ -2.03
LSM4YER112W YBL112CQ3E7Y4 105 aa2.34□□□□□ -2.03
LSM4YER112W COY1P34237 679 aa2.33□□□□□ -2.04
LSM4YER112W YER188WP40103 239 aa2.33□□□□□ -2.04
LSM4YER112W DSN1P40568 576 aa2.33□□□□□ -2.04
LSM4YER112W MAL13P53338 473 aa2.33□□□□□ -2.04
LSM4YER112W SSU72P53538 206 aaPredicted RBP2.33□□□□□ -2.04
LSM4YER112W COS2P0CX12 379 aa2.32□□□□□ -2.04
LSM4YER112W COS3P0CX13 379 aa2.32□□□□□ -2.04
LSM4YER112W DAL82P21705 255 aa2.32□□□□□ -2.04
LSM4YER112W TOM40P23644 387 aaKnown RBP2.32□□□□□ -2.04
LSM4YER112W RNP1P32385 249 aa2.32□□□□□ -2.04
LSM4YER112W MAL32P38158 584 aa2.32□□□□□ -2.04
LSM4YER112W YHL049CP38722 271 aa2.32□□□□□ -2.04
LSM4YER112W YHR045WP38775 560 aa2.32□□□□□ -2.04
LSM4YER112W MEP1P40260 492 aa2.32□□□□□ -2.04
LSM4YER112W YAR1P46683 200 aa2.32□□□□□ -2.04
LSM4YER112W PIR5P46999 287 aa2.32□□□□□ -2.04
LSM4YER112W YJL028WP47062 111 aa2.32□□□□□ -2.04
LSM4YER112W MAL12P53341 584 aa2.32□□□□□ -2.04
LSM4YER112W RGM1Q00453 211 aa2.32□□□□□ -2.04
LSM4YER112W MYO5Q04439 1219 aaKnown RBP2.32□□□□□ -2.04
LSM4YER112W SPO77Q06134 477 aa2.32□□□□□ -2.04
LSM4YER112W SLD7Q08457 257 aa2.32□□□□□ -2.04
LSM4YER112W PST1Q12355 444 aa2.32□□□□□ -2.04
LSM4YER112W YPL247CQ12523 523 aa2.32□□□□□ -2.04
LSM4YER112W RPL26AP05743 127 aaKnown RBP2.31□□□□□ -2.04
LSM4YER112W RAD10P06838 210 aa2.31□□□□□ -2.04
LSM4YER112W PPH21P23594 369 aa2.31□□□□□ -2.04
LSM4YER112W VPS3P23643 1011 aa2.31□□□□□ -2.04
LSM4YER112W CWP1P28319 239 aa2.31□□□□□ -2.04
LSM4YER112W CLB6P32943 380 aa2.31□□□□□ -2.04
LSM4YER112W PRS2P38620 318 aaKnown RBP2.31□□□□□ -2.04
LSM4YER112W RPL10P41805 221 aaKnown RBP2.31□□□□□ -2.04
LSM4YER112W RPL26BP53221 127 aaKnown RBP2.31□□□□□ -2.04
LSM4YER112W KAP95Q06142 861 aaKnown RBP2.31□□□□□ -2.04
LSM4YER112W ATG17Q06410 417 aa2.31□□□□□ -2.04
LSM4YER112W TY3A-GQ12173 290 aa2.31□□□□□ -2.04
LSM4YER112W RRP36Q12481 300 aaPredicted RBP2.31□□□□□ -2.04
LSM4YER112W SNF8Q12483 233 aa2.31□□□□□ -2.04
LSM4YER112W YPL119C-AQ3E751 87 aa2.31□□□□□ -2.04
LSM4YER112W TY3A-IQ99219 290 aa2.31□□□□□ -2.04
LSM4YER112W POX1P13711 748 aa2.3□□□□□ -2.04
LSM4YER112W YJL118WP47022 219 aa2.3□□□□□ -2.04
LSM4YER112W YDR209CQ03480 137 aa2.3□□□□□ -2.04
LSM4YER112W GRH1Q04410 372 aaKnown RBP2.3□□□□□ -2.04
LSM4YER112W YMR114CQ04471 368 aaKnown RBP2.3□□□□□ -2.04
LSM4YER112W BOP2Q06150 570 aa2.3□□□□□ -2.04
LSM4YER112W CTS2Q06350 511 aa2.3□□□□□ -2.04
LSM4YER112W YOR268CQ08734 132 aa2.3□□□□□ -2.04
LSM4YER112W NOT5Q12514 560 aaPredicted RBP2.3□□□□□ -2.04
LSM4YER112W DPM1P14020 267 aaKnown RBP2.29□□□□□ -2.04
LSM4YER112W GDH2P33327 1092 aaKnown RBP2.29□□□□□ -2.04
LSM4YER112W ECM13P38195 257 aa2.29□□□□□ -2.04
LSM4YER112W COG3P40094 801 aa2.29□□□□□ -2.04
LSM4YER112W DSK2P48510 373 aa2.29□□□□□ -2.04
LSM4YER112W EBS1Q03466 884 aaKnown RBP2.29□□□□□ -2.04
LSM4YER112W BTS1Q12051 335 aa2.29□□□□□ -2.04
LSM4YER112W INO80P53115 1489 aa2.28□□□□□ -2.04
LSM4YER112W POL30P15873 258 aaKnown RBP2.28□□□□□ -2.04
LSM4YER112W QRI5P32344 111 aa2.28□□□□□ -2.04
LSM4YER112W SSH1P38353 490 aaKnown RBP2.28□□□□□ -2.04
LSM4YER112W MED6P38782 295 aa2.28□□□□□ -2.04
LSM4YER112W YJL016WP47072 561 aa2.28□□□□□ -2.04
LSM4YER112W ASI3P53983 676 aa2.28□□□□□ -2.04
LSM4YER112W EMI1Q04406 187 aa2.28□□□□□ -2.04
LSM4YER112W PLB3Q08108 686 aa2.28□□□□□ -2.04
LSM4YER112W RSR1P13856 272 aa2.27□□□□□ -2.05
LSM4YER112W SNF6P18888 332 aa2.27□□□□□ -2.05
LSM4YER112W MRX3P38172 270 aa2.27□□□□□ -2.05
LSM4YER112W TIF34P40217 347 aaKnown RBP2.27□□□□□ -2.05
LSM4YER112W MNN5P46982 586 aa2.27□□□□□ -2.05
LSM4YER112W GON7P46984 123 aa2.27□□□□□ -2.05
LSM4YER112W NBP1P52919 319 aaPredicted RBP2.27□□□□□ -2.05
LSM4YER112W MDM34P53083 459 aa2.27□□□□□ -2.05
LSM4YER112W YDR124WQ04608 324 aa2.27□□□□□ -2.05
LSM4YER112W YPR147CQ06522 304 aaKnown RBP2.27□□□□□ -2.05
LSM4YER112W GEP5Q12393 293 aa2.27□□□□□ -2.05
LSM4YER112W YBL008W-AQ3E821 79 aa2.27□□□□□ -2.05
LSM4YER112W FKS1P38631 1876 aaKnown RBP2.26□□□□□ -2.05
LSM4YER112W MSF1P08425 469 aa2.26□□□□□ -2.05
LSM4YER112W RNA15P25299 296 aaPredicted RBP2.26□□□□□ -2.05
LSM4YER112W YUH1P35127 236 aa2.26□□□□□ -2.05
LSM4YER112W PRS4P38063 326 aaPredicted RBP2.26□□□□□ -2.05
LSM4YER112W FZO1P38297 855 aa2.26□□□□□ -2.05
LSM4YER112W YHL026CP38740 315 aa2.26□□□□□ -2.05
LSM4YER112W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
LSM4YER112W SUE1Q06524 206 aa2.26□□□□□ -2.05
LSM4YER112W RDS3Q06835 107 aaPredicted RBP2.26□□□□□ -2.05
LSM4YER112W VPS68Q12016 184 aa2.26□□□□□ -2.05
LSM4YER112W MRPL49P40858 161 aaPredicted RBP2.25□□□□□ -2.05
LSM4YER112W GOT1Q03554 138 aa2.25□□□□□ -2.05
LSM4YER112W PEX12Q04370 399 aa2.25□□□□□ -2.05
LSM4YER112W YPR098CQ06089 161 aa2.25□□□□□ -2.05
LSM4YER112W SDO1Q07953 250 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 21.5 ms