RNA–Protein interactions for RNA: YER088C-A

YER088C-A, Transcript of Dubious open reading frame, yeastyeast

Gene YER088C-A, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088C-AYER088C-A FUS3P16892 353 aaKnown RBP1.34□□□□□ -2.19
YER088C-AYER088C-A CPT1P17898 393 aa1.34□□□□□ -2.19
YER088C-AYER088C-A PHO80P20052 293 aa1.34□□□□□ -2.19
YER088C-AYER088C-A MRPL25P23369 157 aa1.34□□□□□ -2.19
YER088C-AYER088C-A RPB9P27999 122 aa1.34□□□□□ -2.19
YER088C-AYER088C-A HOM6P31116 359 aaKnown RBP1.34□□□□□ -2.19
YER088C-AYER088C-A VPH2P32341 215 aa1.34□□□□□ -2.19
YER088C-AYER088C-A ERG2P32352 222 aa1.34□□□□□ -2.19
YER088C-AYER088C-A DOA4P32571 926 aa1.34□□□□□ -2.19
YER088C-AYER088C-A MID2P36027 376 aa1.34□□□□□ -2.19
YER088C-AYER088C-A MRX3P38172 270 aa1.34□□□□□ -2.19
YER088C-AYER088C-A YBL081WP38180 368 aaKnown RBP1.34□□□□□ -2.19
YER088C-AYER088C-A SSH1P38353 490 aaKnown RBP1.34□□□□□ -2.19
YER088C-AYER088C-A CUE1P38428 203 aa1.34□□□□□ -2.19
YER088C-AYER088C-A GCN20P43535 752 aaKnown RBP1.34□□□□□ -2.19
YER088C-AYER088C-A OTU1P43558 301 aa1.34□□□□□ -2.19
YER088C-AYER088C-A GLG2P47011 380 aa1.34□□□□□ -2.19
YER088C-AYER088C-A YJR079WP47126 109 aa1.34□□□□□ -2.19
YER088C-AYER088C-A JHD2P47156 728 aaPredicted RBP1.34□□□□□ -2.19
YER088C-AYER088C-A PGA2P53903 129 aa1.34□□□□□ -2.19
YER088C-AYER088C-A SWS2P53937 143 aa1.34□□□□□ -2.19
YER088C-AYER088C-A YLR283WQ05867 314 aa1.34□□□□□ -2.19
YER088C-AYER088C-A SLD7Q08457 257 aa1.34□□□□□ -2.19
YER088C-AYER088C-A CSM4Q08955 156 aa1.34□□□□□ -2.19
YER088C-AYER088C-A YCT1Q12235 531 aa1.34□□□□□ -2.19
YER088C-AYER088C-A YAL063C-AQ3E791 96 aa1.34□□□□□ -2.19
YER088C-AYER088C-A SIR4P11978 1358 aa1.34□□□□□ -2.2
YER088C-AYER088C-A DRS2P39524 1355 aa1.34□□□□□ -2.2
YER088C-AYER088C-A YEL009C-AA0A023PZF2 135 aa1.33□□□□□ -2.2
YER088C-AYER088C-A YKR104WP0CE69 306 aa1.33□□□□□ -2.2
YER088C-AYER088C-A COQ1P18900 473 aa1.33□□□□□ -2.2
YER088C-AYER088C-A VMA6P32366 345 aaKnown RBP1.33□□□□□ -2.2
YER088C-AYER088C-A YHL049CP38722 271 aa1.33□□□□□ -2.2
YER088C-AYER088C-A ARN2P38724 620 aa1.33□□□□□ -2.2
YER088C-AYER088C-A YHR127WP38833 243 aaKnown RBP1.33□□□□□ -2.2
YER088C-AYER088C-A HOC1P47124 396 aa1.33□□□□□ -2.2
YER088C-AYER088C-A NBP35P52920 328 aa1.33□□□□□ -2.2
YER088C-AYER088C-A NIF3P53081 288 aa1.33□□□□□ -2.2
YER088C-AYER088C-A YGR067CP53243 804 aa1.33□□□□□ -2.2
YER088C-AYER088C-A RSM27P53305 110 aa1.33□□□□□ -2.2
YER088C-AYER088C-A SMD1Q02260 146 aaPredicted RBP1.33□□□□□ -2.2
YER088C-AYER088C-A CTF19Q02732 369 aa1.33□□□□□ -2.2
YER088C-AYER088C-A SDC1Q03323 175 aa1.33□□□□□ -2.2
YER088C-AYER088C-A GOT1Q03554 138 aa1.33□□□□□ -2.2
YER088C-AYER088C-A DCR2Q05924 578 aa1.33□□□□□ -2.2
YER088C-AYER088C-A YLR179CQ06252 201 aaKnown RBP1.33□□□□□ -2.2
YER088C-AYER088C-A DXO1Q06349 442 aa1.33□□□□□ -2.2
YER088C-AYER088C-A YOL019WQ08157 551 aa1.33□□□□□ -2.2
YER088C-AYER088C-A YLR126CQ12288 251 aa1.33□□□□□ -2.2
YER088C-AYER088C-A YOL085CQ99345 113 aa1.33□□□□□ -2.2
YER088C-AYER088C-A THP2O13539 261 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A RPL28P02406 149 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A CDC36P06100 191 aaPredicted RBP1.32□□□□□ -2.2
YER088C-AYER088C-A YAK1P14680 807 aa1.32□□□□□ -2.2
YER088C-AYER088C-A CUP2P15315 225 aa1.32□□□□□ -2.2
YER088C-AYER088C-A STE18P18852 110 aa1.32□□□□□ -2.2
YER088C-AYER088C-A PRE7P23724 241 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A CDC10P25342 322 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A PBN1P25580 416 aa1.32□□□□□ -2.2
YER088C-AYER088C-A BMH1P29311 267 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A CSG2P35206 410 aa1.32□□□□□ -2.2
YER088C-AYER088C-A CBT1P36038 271 aaPredicted RBP1.32□□□□□ -2.2
YER088C-AYER088C-A HMT1P38074 348 aa1.32□□□□□ -2.2
YER088C-AYER088C-A SIP3P38717 1229 aa1.32□□□□□ -2.2
YER088C-AYER088C-A GOS1P38736 223 aa1.32□□□□□ -2.2
YER088C-AYER088C-A TRR2P38816 342 aa1.32□□□□□ -2.2
YER088C-AYER088C-A YMR144WP40214 342 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A YIL059CP40520 121 aa1.32□□□□□ -2.2
YER088C-AYER088C-A SYS1P41544 203 aa1.32□□□□□ -2.2
YER088C-AYER088C-A SNZ3P43545 298 aa1.32□□□□□ -2.2
YER088C-AYER088C-A ECO1P43605 281 aa1.32□□□□□ -2.2
YER088C-AYER088C-A UFD1P53044 361 aa1.32□□□□□ -2.2
YER088C-AYER088C-A NSA1P53136 463 aaPredicted RBP1.32□□□□□ -2.2
YER088C-AYER088C-A SNZ2P53824 298 aa1.32□□□□□ -2.2
YER088C-AYER088C-A ACT1P60010 375 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A YMR166CQ03829 368 aa1.32□□□□□ -2.2
YER088C-AYER088C-A SPG4Q04438 115 aa1.32□□□□□ -2.2
YER088C-AYER088C-A YDR124WQ04608 324 aa1.32□□□□□ -2.2
YER088C-AYER088C-A SPO77Q06134 477 aa1.32□□□□□ -2.2
YER088C-AYER088C-A HEM25Q07534 307 aa1.32□□□□□ -2.2
YER088C-AYER088C-A YRA1Q12159 226 aaKnown RBP1.32□□□□□ -2.2
YER088C-AYER088C-A RFM1Q12192 310 aa1.32□□□□□ -2.2
YER088C-AYER088C-A IES3Q12345 250 aa1.32□□□□□ -2.2
YER088C-AYER088C-A PST1Q12355 444 aa1.32□□□□□ -2.2
YER088C-AYER088C-A YBL008W-AQ3E821 79 aa1.32□□□□□ -2.2
YER088C-AYER088C-A SAC3P46674 1301 aa1.32□□□□□ -2.2
YER088C-AYER088C-A YMR31P19955 123 aa1.31□□□□□ -2.2
YER088C-AYER088C-A YCR102CP25608 368 aa1.31□□□□□ -2.2
YER088C-AYER088C-A IDH1P28834 360 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
YER088C-AYER088C-A SSO1P32867 290 aa1.31□□□□□ -2.2
YER088C-AYER088C-A PRP18P33411 251 aaPredicted RBP1.31□□□□□ -2.2
YER088C-AYER088C-A VPS21P36017 210 aaKnown RBP1.31□□□□□ -2.2
YER088C-AYER088C-A RIB1P38066 345 aa1.31□□□□□ -2.2
YER088C-AYER088C-A YBR096WP38256 230 aa1.31□□□□□ -2.2
YER088C-AYER088C-A YHI9P38765 294 aa1.31□□□□□ -2.2
YER088C-AYER088C-A YHB1P39676 399 aaKnown RBP1.31□□□□□ -2.2
YER088C-AYER088C-A ERG28P40030 148 aa1.31□□□□□ -2.2
YER088C-AYER088C-A YNL194CP40169 301 aa1.31□□□□□ -2.2
YER088C-AYER088C-A YIR035CP40579 254 aa1.31□□□□□ -2.2
YER088C-AYER088C-A TRM9P49957 279 aa1.31□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms