RNA–Protein interactions for RNA: YDR485C

VPS72, Transcript of Htz1p-binding component of the SWR1 complex, yeast

Gene VPS72, Length 2,388 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS72	YDR485C	NOC4	Q06512	552 aa	Predicted RBP	4.93	□□□□□ -1.62
VPS72	YDR485C	OAR1	P35731	278 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	RPR2	P40571	144 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	TPS1	Q00764	495 aa	Known RBP	4.93	□□□□□ -1.62
VPS72	YDR485C	ARO80	Q04052	950 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	YMR315W	Q04869	349 aa	Known RBP	4.93	□□□□□ -1.62
VPS72	YDR485C	ORM2	Q06144	216 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	EAF3	Q12432	401 aa		4.93	□□□□□ -1.62
VPS72	YDR485C	YCR025C	P25352	136 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	PMU1	P36069	295 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	RIP-Chip
VPS72	YDR485C	DER1	P38307	211 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	YHR127W	P38833	243 aa	Known RBP	4.92	□□□□□ -1.62
VPS72	YDR485C	PAN6	P40459	309 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	MOB2	P43563	287 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	IBD2	P53892	351 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	FYV6	P53913	173 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	YMR279C	Q03263	540 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	YDR415C	Q04033	374 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS72	YDR485C	AGC1	Q12482	902 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	TPS2	P31688	896 aa	Known RBP	4.92	□□□□□ -1.62
VPS72	YDR485C	NUF2	P33895	451 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	MRPL28	P36527	147 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	HMT1	P38074	348 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	YHL049C	P38722	271 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	YJL016W	P47072	561 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	NQM1	P53228	333 aa	Predicted RBP	4.92	□□□□□ -1.62
VPS72	YDR485C	GRX8	Q05926	109 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	RIF2	Q06208	395 aa		4.92	□□□□□ -1.62
VPS72	YDR485C	YKR104W	P0CE69	306 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	RPL4A	P10664	362 aa	Known RBP	4.91	□□□□□ -1.62
VPS72	YDR485C	ZWF1	P11412	505 aa	Known RBP	4.91	□□□□□ -1.62
VPS72	YDR485C	UBC8	P28263	218 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	NAT2	P37293	288 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	AGE2	P40529	298 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	RPL4B	P49626	362 aa	Known RBP	4.91	□□□□□ -1.62
VPS72	YDR485C	SPG4	Q04438	115 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	YPR147C	Q06522	304 aa	Known RBP	4.91	□□□□□ -1.62
VPS72	YDR485C	ATP16	Q12165	160 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	SCO2	P38072	301 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	YOR292C	Q08743	309 aa		4.91	□□□□□ -1.62
VPS72	YDR485C	ATR1	P13090	542 aa		4.9	□□□□□ -1.62
VPS72	YDR485C	CAF4	P36130	643 aa		4.9	□□□□□ -1.62
VPS72	YDR485C	RRP3	P38712	501 aa	Known RBP	4.9	□□□□□ -1.62
VPS72	YDR485C	PTI1	P39927	425 aa	Predicted RBP	4.9	□□□□□ -1.62
VPS72	YDR485C	SHY1	P53266	389 aa		4.9	□□□□□ -1.62
VPS72	YDR485C	GTR2	P53290	341 aa		4.9	□□□□□ -1.62
VPS72	YDR485C	PET191	Q02772	108 aa		4.9	□□□□□ -1.62
VPS72	YDR485C	STE7	P06784	515 aa		4.9	□□□□□ -1.63
VPS72	YDR485C	DPM1	P14020	267 aa	Known RBP	4.9	□□□□□ -1.63
VPS72	YDR485C	CUP2	P15315	225 aa		4.9	□□□□□ -1.63
VPS72	YDR485C	ARC40	P38328	384 aa	Known RBP	4.9	□□□□□ -1.63
VPS72	YDR485C	YER076C	P40049	302 aa		4.9	□□□□□ -1.63
VPS72	YDR485C	RSM25	P40496	264 aa		4.9	□□□□□ -1.63
VPS72	YDR485C	YJR085C	P47131	105 aa	Known RBP	4.9	□□□□□ -1.63
VPS72	YDR485C	NUP49	Q02199	472 aa		4.9	□□□□□ -1.63
VPS72	YDR485C	DTD1	Q07648	150 aa	Known RBP	4.9	□□□□□ -1.63
VPS72	YDR485C	TRP1	P00912	224 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	CLG1	P35190	452 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	DIM1	P41819	318 aa	Known RBP	4.89	□□□□□ -1.63
VPS72	YDR485C	YJR056C	P47115	236 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	NSL1	Q12143	216 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	TFC7	Q12415	435 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	COX5A	P00424	153 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	MRP21	P38175	177 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	NRM1	P53718	249 aa		4.89	□□□□□ -1.63
VPS72	YDR485C	MHP1	P43638	1398 aa		4.88	□□□□□ -1.63
VPS72	YDR485C	CDC28	P00546	298 aa	Known RBP	4.88	□□□□□ -1.63
VPS72	YDR485C	RPL15A	P05748	204 aa	Known RBP	4.88	□□□□□ -1.63
VPS72	YDR485C	OAC1	P32332	324 aa		4.88	□□□□□ -1.63
VPS72	YDR485C	ECM33	P38248	429 aa	Known RBP	4.88	□□□□□ -1.63
VPS72	YDR485C	EDC3	P39998	551 aa	Known RBP	4.88	□□□□□ -1.63
VPS72	YDR485C	SOK1	P40317	901 aa		4.88	□□□□□ -1.63
VPS72	YDR485C	MSA1	Q08471	629 aa		4.88	□□□□□ -1.63
VPS72	YDR485C	YOR283W	Q12040	230 aa	Known RBP	4.88	□□□□□ -1.63
VPS72	YDR485C	EMP46	Q12396	444 aa		4.88	□□□□□ -1.63
VPS72	YDR485C	NOT5	Q12514	560 aa	Predicted RBP	4.88	□□□□□ -1.63
VPS72	YDR485C	YHR139C-A	O13536	103 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	AVT7	P40501	490 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	MDV1	P47025	714 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	AVT1	P47082	602 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	FMP41	P53889	259 aa	Known RBP	4.87	□□□□□ -1.63
VPS72	YDR485C	CRZ1	P53968	678 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	YET2	Q04210	160 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	ISY1	P21374	235 aa	Predicted RBP	4.87	□□□□□ -1.63
VPS72	YDR485C	CAT2	P32796	670 aa	Known RBP	4.87	□□□□□ -1.63
VPS72	YDR485C	BNS1	P50084	137 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	SBH2	P52871	88 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	YGL034C	P53186	121 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	YNL046W	P53956	172 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	ERP1	Q05359	219 aa	Known RBP	4.87	□□□□□ -1.63
VPS72	YDR485C	GAS2	Q06135	555 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	YOR376W	Q08900	122 aa		4.87	□□□□□ -1.63
VPS72	YDR485C	MRS1	P07266	363 aa		4.86	□□□□□ -1.63
VPS72	YDR485C	ERD2	P18414	219 aa		4.86	□□□□□ -1.63
VPS72	YDR485C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
VPS72	YDR485C	DRE2	P36152	348 aa		4.86	□□□□□ -1.63
VPS72	YDR485C	FRM2	P37261	193 aa		4.86	□□□□□ -1.63
VPS72	YDR485C	PRM10	P42946	383 aa		4.86	□□□□□ -1.63
VPS72	YDR485C	NCA3	P46955	337 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.1 ms