RNA–Protein interactions for RNA: YDR460W

TFB3, Transcript of Subunit of TFIIH and nucleotide excision repair factor 3 complexes, yeast

Gene TFB3, Length 966 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB3	YDR460W	UBI4	P0CG63	381 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	RPL40A	P0CH08	128 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	RPL40B	P0CH09	128 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	CPR1	P14832	162 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	AMD1	P15274	810 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	ATP10	P18496	279 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	SUA5	P32579	426 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	TMA19	P35691	167 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	SFK1	P35735	353 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	ALY1	P36117	915 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YMC2	P38087	329 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YBL029W	P38201	376 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YBR013C	P38215	129 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YBR220C	P38318	560 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	SRP68	P38687	599 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	GAA1	P39012	614 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	AYR1	P40471	297 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	OPT1	P40897	799 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	TAD2	P47058	250 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	TAH11	P47112	604 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	MDM34	P53083	459 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YGL159W	P53110	370 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	PRM8	P53174	237 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	SHY1	P53266	389 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YGR151C	P53287	111 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	FRE4	P53746	719 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YNR066C	P53752	436 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	APS2	Q00381	147 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	DYN2	Q02647	92 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	ELC1	Q03071	99 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YML018C	Q03730	393 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YMR155W	Q03795	547 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	MTQ2	Q03920	221 aa	Predicted RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	THI74	Q04083	370 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YMR087W	Q04299	284 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	TMN2	Q04562	672 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	ASM4	Q05166	528 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	RRP45	Q05636	305 aa	Known RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	SKG3	Q06315	1026 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	PRP11	Q07350	266 aa	Predicted RBP	4.2	□□□□□ -1.74
TFB3	YDR460W	CRT10	Q08226	957 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	ENB1	Q08299	606 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	SIA1	Q12212	622 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YLR118C	Q12354	227 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	RDI1	Q12434	202 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YNR034W-A	Q3E841	98 aa		4.2	□□□□□ -1.74
TFB3	YDR460W	YEL009C-A	A0A023PZF2	135 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	YLR415C	O13578	112 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	MSW1	P04803	379 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	SIR2	P06700	562 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	TY2A-F	P0CX61	438 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	TY2A-GR2	P0CX62	438 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	RPB5	P20434	215 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	MRP49	P32388	137 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	YSC83	P32792	385 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	CMC1	P36064	111 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	MRPL24	P36525	258 aa	Predicted RBP	4.19	□□□□□ -1.74
TFB3	YDR460W	QDR3	P38227	689 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	YEL057C	P39983	233 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	SPC25	P40014	221 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	RRG9	P40156	214 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	RPL13B	P40212	199 aa	Known RBP	4.19	□□□□□ -1.74
TFB3	YDR460W	EMC5	P40540	141 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	PMT6	P42934	759 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	PEX31	P53203	462 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	APJ1	P53940	528 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	TPS1	Q00764	495 aa	Known RBP	4.19	□□□□□ -1.74
TFB3	YDR460W	IRC15	Q02733	499 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	YDR248C	Q03786	193 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	VBA1	Q04301	562 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	MRX8	Q05473	314 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	INM2	Q05533	292 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	ATG39	Q06159	398 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	YLR179C	Q06252	201 aa	Known RBP	4.19	□□□□□ -1.74
TFB3	YDR460W	YOL159C	Q08300	171 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	LEU9	Q12166	604 aa	Known RBP	4.19	□□□□□ -1.74
TFB3	YDR460W	YOL114C	Q12322	202 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	WTM1	Q12363	437 aa	Known RBP	4.19	□□□□□ -1.74
TFB3	YDR460W	ATG5	Q12380	294 aa		4.19	□□□□□ -1.74
TFB3	YDR460W	RPL13A	Q12690	199 aa	Predicted RBP	4.19	□□□□□ -1.74
TFB3	YDR460W	SUC2	P00724	532 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	RAD6	P06104	172 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	ILV5	P06168	395 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	GDH1	P07262	454 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	SEC12	P11655	471 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	SST2	P11972	698 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	APE1	P14904	514 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	BGL2	P15703	313 aa	Known RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	BUD5	P25300	642 aa	Predicted RBP	4.18	□□□□□ -1.74
TFB3	YDR460W	KIN82	P25341	720 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	POT1	P27796	417 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
TFB3	YDR460W	MRP20	P32387	263 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	DCG1	P32460	244 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	SNC2	P33328	115 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	MRPS9	P38120	278 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	ARP1	P38696	384 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	HSP10	P38910	106 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	HEM14	P40012	539 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	YIL067C	P40514	678 aa		4.18	□□□□□ -1.74
TFB3	YDR460W	GPP1	P41277	250 aa	Known RBP	4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms