RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W YOR268CQ08734 132 aa2.25□□□□□ -2.05
RPN9YDR427W VPS68Q12016 184 aa2.25□□□□□ -2.05
RPN9YDR427W YPL150WQ12152 901 aa2.25□□□□□ -2.05
RPN9YDR427W NUP157P40064 1391 aaKnown RBP2.24□□□□□ -2.05
RPN9YDR427W YEL009C-AA0A023PZF2 135 aa2.24□□□□□ -2.05
RPN9YDR427W HIS1P00498 297 aaKnown RBP2.24□□□□□ -2.05
RPN9YDR427W BMH1P29311 267 aaKnown RBP2.24□□□□□ -2.05
RPN9YDR427W MNN5P46982 586 aa2.24□□□□□ -2.05
RPN9YDR427W YJL118WP47022 219 aa2.24□□□□□ -2.05
RPN9YDR427W MAL13P53338 473 aa2.24□□□□□ -2.05
RPN9YDR427W MPP6P53725 186 aaPredicted RBP2.24□□□□□ -2.05
RPN9YDR427W OST6Q03723 332 aa2.24□□□□□ -2.05
RPN9YDR427W YMR166CQ03829 368 aa2.24□□□□□ -2.05
RPN9YDR427W ATC1Q04005 294 aa2.24□□□□□ -2.05
RPN9YDR427W INO80P53115 1489 aa2.24□□□□□ -2.05
RPN9YDR427W YHL049CP38722 271 aa2.23□□□□□ -2.05
RPN9YDR427W YJR146WP47174 117 aa2.23□□□□□ -2.05
RPN9YDR427W ALG11P53954 548 aaKnown RBP2.23□□□□□ -2.05
RPN9YDR427W PLB3Q08108 686 aa2.23□□□□□ -2.05
RPN9YDR427W YOL019WQ08157 551 aa2.23□□□□□ -2.05
RPN9YDR427W SMT3Q12306 101 aaKnown RBP2.23□□□□□ -2.05
RPN9YDR427W STH1P32597 1359 aa2.23□□□□□ -2.05
RPN9YDR427W PPH21P23594 369 aa2.22□□□□□ -2.05
RPN9YDR427W RPT5P33297 434 aaKnown RBP2.22□□□□□ -2.05
RPN9YDR427W YHR045WP38775 560 aa2.22□□□□□ -2.05
RPN9YDR427W DSN1P40568 576 aa2.22□□□□□ -2.05
RPN9YDR427W MYO5Q04439 1219 aaKnown RBP2.22□□□□□ -2.05
RPN9YDR427W YPL247CQ12523 523 aa2.22□□□□□ -2.05
RPN9YDR427W MSF1P08425 469 aa2.21□□□□□ -2.06
RPN9YDR427W DAL82P21705 255 aa2.21□□□□□ -2.06
RPN9YDR427W GDH2P33327 1092 aaKnown RBP2.21□□□□□ -2.06
RPN9YDR427W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
RPN9YDR427W HEK2P38199 381 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
RPN9YDR427W PRS2P38620 318 aaKnown RBP2.21□□□□□ -2.06
RPN9YDR427W COG3P40094 801 aa2.21□□□□□ -2.06
RPN9YDR427W AGX1P43567 385 aa2.21□□□□□ -2.06
RPN9YDR427W YJR012CP47087 207 aa2.21□□□□□ -2.06
RPN9YDR427W NBP1P52919 319 aaPredicted RBP2.21□□□□□ -2.06
RPN9YDR427W SLX9P53251 210 aaPredicted RBP2.21□□□□□ -2.06
RPN9YDR427W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.21□□□□□ -2.06not detected
RPN9YDR427W GRH1Q04410 372 aaKnown RBP2.21□□□□□ -2.06
RPN9YDR427W RDS3Q06835 107 aaPredicted RBP2.21□□□□□ -2.06
RPN9YDR427W RRT8Q08219 342 aa2.21□□□□□ -2.06
RPN9YDR427W RAD10P06838 210 aa2.2□□□□□ -2.06
RPN9YDR427W QRI5P32344 111 aa2.2□□□□□ -2.06
RPN9YDR427W RPL10P41805 221 aaKnown RBP2.2□□□□□ -2.06
RPN9YDR427W CAB4P53332 305 aa2.2□□□□□ -2.06
RPN9YDR427W AAH1P53909 347 aa2.2□□□□□ -2.06
RPN9YDR427W EBS1Q03466 884 aaKnown RBP2.2□□□□□ -2.06
RPN9YDR427W CGI121Q03705 181 aaKnown RBP2.2□□□□□ -2.06
RPN9YDR427W ADH6Q04894 360 aaKnown RBP2.2□□□□□ -2.06
RPN9YDR427W SPO77Q06134 477 aa2.2□□□□□ -2.06
RPN9YDR427W MRP1P10662 321 aaKnown RBP2.19□□□□□ -2.06
RPN9YDR427W RSR1P13856 272 aa2.19□□□□□ -2.06
RPN9YDR427W DPB2P24482 689 aaPredicted RBP2.19□□□□□ -2.06
RPN9YDR427W SFC1P33303 322 aa2.19□□□□□ -2.06
RPN9YDR427W YUH1P35127 236 aa2.19□□□□□ -2.06
RPN9YDR427W DRE2P36152 348 aa2.19□□□□□ -2.06
RPN9YDR427W YJL028WP47062 111 aa2.19□□□□□ -2.06
RPN9YDR427W NIF3P53081 288 aa2.19□□□□□ -2.06
RPN9YDR427W PEX10Q05568 337 aa2.19□□□□□ -2.06
RPN9YDR427W YOR283WQ12040 230 aaKnown RBP2.19□□□□□ -2.06
RPN9YDR427W SNF8Q12483 233 aa2.19□□□□□ -2.06
RPN9YDR427W EHD3P28817 500 aa2.18□□□□□ -2.06
RPN9YDR427W MRX3P38172 270 aa2.18□□□□□ -2.06
RPN9YDR427W BIG1P38813 335 aa2.18□□□□□ -2.06
RPN9YDR427W SPT8P38915 602 aa2.18□□□□□ -2.06
RPN9YDR427W TEM1P38987 245 aa2.18□□□□□ -2.06
RPN9YDR427W YJL016WP47072 561 aa2.18□□□□□ -2.06
RPN9YDR427W DSK2P48510 373 aa2.18□□□□□ -2.06
RPN9YDR427W MDM34P53083 459 aa2.18□□□□□ -2.06
RPN9YDR427W YMR114CQ04471 368 aaKnown RBP2.18□□□□□ -2.06
RPN9YDR427W SDO1Q07953 250 aaKnown RBP2.18□□□□□ -2.06
RPN9YDR427W BTS1Q12051 335 aa2.18□□□□□ -2.06
RPN9YDR427W YOL107WQ12239 342 aa2.18□□□□□ -2.06
RPN9YDR427W YPL119C-AQ3E751 87 aa2.18□□□□□ -2.06
RPN9YDR427W POX1P13711 748 aa2.17□□□□□ -2.06
RPN9YDR427W VPS3P23643 1011 aa2.17□□□□□ -2.06
RPN9YDR427W CWP1P28319 239 aa2.17□□□□□ -2.06
RPN9YDR427W PRS4P38063 326 aaPredicted RBP2.17□□□□□ -2.06
RPN9YDR427W YGP1P38616 354 aaKnown RBP2.17□□□□□ -2.06
RPN9YDR427W SMB1P40018 196 aaKnown RBP2.17□□□□□ -2.06
RPN9YDR427W TIF34P40217 347 aaKnown RBP2.17□□□□□ -2.06
RPN9YDR427W GON7P46984 123 aa2.17□□□□□ -2.06
RPN9YDR427W COS6P53344 381 aa2.17□□□□□ -2.06
RPN9YDR427W EMI1Q04406 187 aa2.17□□□□□ -2.06
RPN9YDR427W SUE1Q06524 206 aa2.17□□□□□ -2.06
RPN9YDR427W ECM13P38195 257 aa2.16□□□□□ -2.06
RPN9YDR427W MRPL49P40858 161 aaPredicted RBP2.16□□□□□ -2.06
RPN9YDR427W GLG2P47011 380 aa2.16□□□□□ -2.06
RPN9YDR427W BOP2Q06150 570 aa2.16□□□□□ -2.06
RPN9YDR427W TY3A-GQ12173 290 aa2.16□□□□□ -2.06
RPN9YDR427W GEP5Q12393 293 aa2.16□□□□□ -2.06
RPN9YDR427W TY3A-IQ99219 290 aa2.16□□□□□ -2.06
RPN9YDR427W RAD3P06839 778 aa2.15□□□□□ -2.07
RPN9YDR427W HOM6P31116 359 aaKnown RBP2.15□□□□□ -2.07
RPN9YDR427W JEN1P36035 616 aa2.15□□□□□ -2.07
RPN9YDR427W YGL034CP53186 121 aa2.15□□□□□ -2.07
RPN9YDR427W SLM2P53955 656 aa2.15□□□□□ -2.07
RPN9YDR427W SCO1P23833 295 aa2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms