RNA–Protein interactions for RNA: YDR425W

SNX41, Transcript of Sorting nexin, yeastyeast

Gene SNX41, Length 1,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNX41YDR425W GAL80P04387 435 aa2.19□□□□□ -2.06
SNX41YDR425W SIR2P06700 562 aa2.19□□□□□ -2.06
SNX41YDR425W ARG80P07249 177 aa2.19□□□□□ -2.06
SNX41YDR425W SAM1P10659 382 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W NHP6BP11633 99 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W MER1P16523 270 aa2.19□□□□□ -2.06
SNX41YDR425W IFM1P25038 676 aa2.19□□□□□ -2.06
SNX41YDR425W YCR099CP25657 155 aa2.19□□□□□ -2.06
SNX41YDR425W OAC1P32332 324 aa2.19□□□□□ -2.06
SNX41YDR425W EMP24P32803 203 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W SFC1P33303 322 aa2.19□□□□□ -2.06
SNX41YDR425W YKL162CP36052 402 aa2.19□□□□□ -2.06
SNX41YDR425W ASC1P38011 319 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W PRS3P38689 320 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W EFM1P38732 585 aa2.19□□□□□ -2.06
SNX41YDR425W IKI1P38874 309 aa2.19□□□□□ -2.06
SNX41YDR425W LSM4P40070 187 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W LSM5P40089 93 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W RFC4P40339 323 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W UTP25P40498 721 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W AGE2P40529 298 aa2.19□□□□□ -2.06
SNX41YDR425W PAM16P42949 149 aa2.19□□□□□ -2.06
SNX41YDR425W RMD8P43620 662 aa2.19□□□□□ -2.06
SNX41YDR425W MRX5P47007 382 aa2.19□□□□□ -2.06
SNX41YDR425W SEH1P53011 349 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W YGL159WP53110 370 aa2.19□□□□□ -2.06
SNX41YDR425W ART5P53244 586 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W TIM13P53299 105 aa2.19□□□□□ -2.06
SNX41YDR425W OGG1P53397 376 aaPredicted RBP2.19□□□□□ -2.06
SNX41YDR425W OCA2P53949 197 aa2.19□□□□□ -2.06
SNX41YDR425W PEX25Q02969 394 aa2.19□□□□□ -2.06
SNX41YDR425W VBA1Q04301 562 aa2.19□□□□□ -2.06
SNX41YDR425W PAL1Q05518 499 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W CDD1Q06549 142 aa2.19□□□□□ -2.06
SNX41YDR425W NDE2Q07500 545 aa2.19□□□□□ -2.06
SNX41YDR425W SFM1Q12314 213 aa2.19□□□□□ -2.06
SNX41YDR425W PAA1Q12447 191 aaKnown RBP2.19□□□□□ -2.06
SNX41YDR425W YPR145C-AQ2V2P0 78 aa2.19□□□□□ -2.06
SNX41YDR425W YDL007C-AQ2V2Q0 85 aa2.19□□□□□ -2.06
SNX41YDR425W MYO1P08964 1928 aa2.19□□□□□ -2.06
SNX41YDR425W FIG2P25653 1609 aa2.19□□□□□ -2.06
SNX41YDR425W COX5AP00424 153 aa2.18□□□□□ -2.06
SNX41YDR425W MES1P00958 751 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W RPL25P04456 142 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W UNG1P12887 359 aa2.18□□□□□ -2.06
SNX41YDR425W CPR1P14832 162 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W ERD2P18414 219 aa2.18□□□□□ -2.06
SNX41YDR425W YCR101CP25607 182 aa2.18□□□□□ -2.06
SNX41YDR425W YIM1P28625 365 aa2.18□□□□□ -2.06
SNX41YDR425W TMA19P35691 167 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W TVP38P36164 337 aa2.18□□□□□ -2.06
SNX41YDR425W MRPL4P36517 319 aa2.18□□□□□ -2.06
SNX41YDR425W REG2P38232 338 aa2.18□□□□□ -2.06
SNX41YDR425W MMS4P38257 691 aa2.18□□□□□ -2.06
SNX41YDR425W YHR035WP38769 630 aa2.18□□□□□ -2.06
SNX41YDR425W PAN6P40459 309 aa2.18□□□□□ -2.06
SNX41YDR425W FMC1P40491 155 aa2.18□□□□□ -2.06
SNX41YDR425W SSU1P41930 458 aa2.18□□□□□ -2.06
SNX41YDR425W YGR201CP42936 225 aa2.18□□□□□ -2.06
SNX41YDR425W PRM10P42946 383 aa2.18□□□□□ -2.06
SNX41YDR425W PMT4P46971 762 aa2.18□□□□□ -2.06
SNX41YDR425W TOM22P49334 152 aa2.18□□□□□ -2.06
SNX41YDR425W ERV14P53173 138 aa2.18□□□□□ -2.06
SNX41YDR425W VOA1P53262 265 aa2.18□□□□□ -2.06
SNX41YDR425W KTR6P54070 446 aa2.18□□□□□ -2.06
SNX41YDR425W MZM1Q03429 123 aaPredicted RBP2.18□□□□□ -2.06
SNX41YDR425W GAS2Q06135 555 aa2.18□□□□□ -2.06
SNX41YDR425W ECM7Q06200 448 aa2.18□□□□□ -2.06
SNX41YDR425W ANT1Q06497 328 aa2.18□□□□□ -2.06
SNX41YDR425W RAD28Q12021 506 aa2.18□□□□□ -2.06
SNX41YDR425W TIR4Q12218 487 aaPredicted RBP2.18□□□□□ -2.06
SNX41YDR425W RDI1Q12434 202 aa2.18□□□□□ -2.06
SNX41YDR425W SPT3P06844 337 aa2.18□□□□□ -2.06
SNX41YDR425W PRB1P09232 635 aa2.18□□□□□ -2.06
SNX41YDR425W SSA3P09435 649 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W RPL31BP0C2H9 113 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W HOM3P10869 527 aa2.18□□□□□ -2.06
SNX41YDR425W TFS1P14306 219 aa2.18□□□□□ -2.06
SNX41YDR425W ERD1P16151 362 aa2.18□□□□□ -2.06
SNX41YDR425W RPB3P16370 318 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W SNF6P18888 332 aa2.18□□□□□ -2.06
SNX41YDR425W MRPL44P19956 98 aa2.18□□□□□ -2.06
SNX41YDR425W MRPL8P22353 238 aa2.18□□□□□ -2.06
SNX41YDR425W DCC1P25559 380 aa2.18□□□□□ -2.06
SNX41YDR425W ADE1P27616 306 aa2.18□□□□□ -2.06
SNX41YDR425W IDH1P28834 360 aaKnown RBP RIP-Chip data2.18□□□□□ -2.06not detected
SNX41YDR425W FUN26P31381 517 aa2.18□□□□□ -2.06
SNX41YDR425W SSS1P35179 80 aa2.18□□□□□ -2.06
SNX41YDR425W YPT52P36018 234 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W SOL2P37262 315 aa2.18□□□□□ -2.06
SNX41YDR425W YBR063CP38083 404 aa2.18□□□□□ -2.06
SNX41YDR425W ATG8P38182 117 aaRIP-Chip data2.18□□□□□ -2.06not detected
SNX41YDR425W HTD2P38790 280 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W YHR122WP38829 231 aa2.18□□□□□ -2.06
SNX41YDR425W ALP1P38971 573 aa2.18□□□□□ -2.06
SNX41YDR425W YEL057CP39983 233 aa2.18□□□□□ -2.06
SNX41YDR425W PRE5P40302 234 aaKnown RBP2.18□□□□□ -2.06
SNX41YDR425W SWM2P40342 146 aa2.18□□□□□ -2.06
SNX41YDR425W POP1P41812 875 aa2.18□□□□□ -2.06
SNX41YDR425W YHC3P47040 408 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms