RNA–Protein interactions for RNA: YDR317W

HIM1, Transcript of Protein of unknown function involved in DNA repair, yeast

Gene HIM1, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HIM1	YDR317W	YPR096C	O13587	100 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	YSF3	P0C074	85 aa	Predicted RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	DAP2	P18962	818 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	DEP1	P31385	405 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	SEC17	P32602	292 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	GEP4	P38812	185 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	TRR2	P38816	342 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	AIM2	P39721	246 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	LYS12	P40495	371 aa	Known RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	UTP25	P40498	721 aa	Known RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	ALB1	P47019	175 aa	Predicted RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	YJL055W	P47044	245 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	ATP22	P50273	684 aa	Predicted RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	ATG38	Q05789	226 aa	Known RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	YLR413W	Q06689	675 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	MCH1	Q07376	486 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	YOR376W	Q08900	122 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	NSL1	Q12143	216 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	SNF8	Q12483	233 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	SKS1	Q12505	502 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	FOL3	Q12676	427 aa	Predicted RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	YOR032W-A	Q8TGS1	66 aa		3.18	□□□□□ -1.9
HIM1	YDR317W	SLH1	P53327	1967 aa	Known RBP	3.18	□□□□□ -1.9
HIM1	YDR317W	FAS1	P07149	2051 aa	Known RBP	3.17	□□□□□ -1.9
HIM1	YDR317W	THP2	O13539	261 aa	Known RBP	3.17	□□□□□ -1.9
HIM1	YDR317W	OPI3	P05375	206 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	CCA1	P21269	546 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	GPI12	P23797	304 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	RPT5	P33297	434 aa	Known RBP	3.17	□□□□□ -1.9
HIM1	YDR317W	MRPL17	P36528	281 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	MRPS9	P38120	278 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	3.17	□□□□□ -1.9	not detected
HIM1	YDR317W	FES1	P38260	290 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	RGI1	P40043	161 aa	Predicted RBP	3.17	□□□□□ -1.9
HIM1	YDR317W	PGU1	P47180	361 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	PAC10	P48363	199 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	YGR067C	P53243	804 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	APJ1	P53940	528 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	YLR460C	P54007	376 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	MRPS16	Q02608	121 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	YOR342C	Q12182	319 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	RNH203	Q12338	110 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	JLP1	Q12358	412 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	PAR32	Q12515	295 aa	Known RBP	3.17	□□□□□ -1.9
HIM1	YDR317W	YOS9	Q99220	542 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	NUM1	Q00402	2748 aa		3.17	□□□□□ -1.9
HIM1	YDR317W	CBP2	P03874	630 aa	Predicted RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	RPL12A	P0CX53	165 aa	Known RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	RPL12B	P0CX54	165 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	ZWF1	P11412	505 aa	Known RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	RNA1	P11745	407 aa	Known RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	DBP3	P20447	523 aa	Known RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	CSM1	P25651	190 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	ATP7	P30902	174 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	JEM1	P40358	645 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	PHB1	P40961	287 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	PMT4	P46971	762 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	KEL2	P50090	882 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	PDR16	P53860	351 aa	Known RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	SKI8	Q02793	397 aa	Predicted RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	YDR476C	Q03362	224 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	YDR209C	Q03480	137 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	FMN1	Q03778	218 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	FAR10	Q06001	478 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	YLR446W	Q06204	433 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	ASA1	Q06822	443 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	MFG1	Q07684	458 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	MDM32	Q12171	622 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	PRP46	Q12417	451 aa	Predicted RBP	3.16	□□□□□ -1.9
HIM1	YDR317W	PSF1	Q12488	208 aa		3.16	□□□□□ -1.9
HIM1	YDR317W	ZRC1	P20107	442 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	SSE1	P32589	693 aa	Known RBP	3.15	□□□□□ -1.91
HIM1	YDR317W	ANR2	P36090	516 aa	Predicted RBP	3.15	□□□□□ -1.91
HIM1	YDR317W	GPX2	P38143	162 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	RCK1	P38622	512 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
HIM1	YDR317W	SOK1	P40317	901 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	EMC2	P47133	292 aa	Known RBP	3.15	□□□□□ -1.91
HIM1	YDR317W	SEH1	P53011	349 aa	Known RBP	3.15	□□□□□ -1.91
HIM1	YDR317W	YPS5	P53057	165 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	CDH1	P53197	566 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	CGI121	Q03705	181 aa	Known RBP	3.15	□□□□□ -1.91
HIM1	YDR317W	URC2	Q04411	772 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	KRE28	Q04431	385 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	YMR310C	Q04867	317 aa	Predicted RBP	3.15	□□□□□ -1.91
HIM1	YDR317W	DYN3	Q04949	312 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	NDL1	Q06568	189 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	LDS2	Q08218	356 aa		3.15	□□□□□ -1.91
HIM1	YDR317W	TRA1	P38811	3744 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	YBR056W-A	I2HB52	66 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	PRB1	P09232	635 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	RPL43A	P0CX25	92 aa	Known RBP	3.14	□□□□□ -1.91
HIM1	YDR317W	RPL43B	P0CX26	92 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	MER1	P16523	270 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	GRR1	P24814	1151 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	TIR2	P33890	251 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	YOR062C	P36025	268 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	IST2	P38250	946 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	BIG1	P38813	335 aa		3.14	□□□□□ -1.91
HIM1	YDR317W	APE4	P38821	490 aa		3.14	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 75.3 ms