RNA–Protein interactions for RNA: YDR211W

GCD6, Transcript of Catalytic epsilon subunit of the translation initiation factor eIF2B, yeast

Gene GCD6, Length 2,139 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD6	YDR211W	SUI1	P32911	108 aa	Known RBP	2.7	□□□□□ -1.98
GCD6	YDR211W	ECT1	P33412	323 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	PAN3	P36102	679 aa	Predicted RBP	2.7	□□□□□ -1.98
GCD6	YDR211W	ANS1	P38832	159 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	PHO90	P39535	881 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	GCV3	P39726	170 aa	Predicted RBP	2.7	□□□□□ -1.98
GCD6	YDR211W	MNT3	P40549	630 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	TAX4	P47030	604 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	SSN8	P47821	323 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	UBP8	P50102	471 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	TPC1	P53257	314 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	PDR16	P53860	351 aa	Known RBP	2.7	□□□□□ -1.98
GCD6	YDR211W	YMR279C	Q03263	540 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	RSM28	Q03430	361 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	YDL211C	Q12121	372 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	TFC7	Q12415	435 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	YKL033W-A	Q86ZR7	236 aa		2.7	□□□□□ -1.98
GCD6	YDR211W	TPI1	P00942	248 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	PUT1	P09368	476 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	HOM3	P10869	527 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	YPK2	P18961	677 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	RPB5	P20434	215 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	APA2	P22108	325 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	IMG2	P25642	146 aa	Predicted RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	URK1	P27515	501 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	FUN19	P28003	413 aa	Predicted RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	not detected
GCD6	YDR211W	ARO9	P38840	513 aa	Predicted RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	2.69	□□□□□ -1.98	RIP-Chip
GCD6	YDR211W	YIL024C	P40543	189 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	YGL101W	P53144	215 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	EST3	Q03096	181 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	BNA7	Q04066	261 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	SNO4	Q04902	237 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	PEX30	Q06169	523 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	AIM6	Q07716	390 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	RDR1	Q08904	546 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	FDH1	Q08911	376 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	HSP33	Q08914	237 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	HSP32	Q08992	237 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	VPS68	Q12016	184 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	LSO2	Q3E772	92 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	CCH1	P50077	2039 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	MSB2	P32334	1306 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	YKR104W	P0CE69	306 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	SEC12	P11655	471 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	DBF20	P32328	564 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	SRB5	P32585	307 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	AGA2	P32781	87 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	TIM12	P32830	109 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	ECM15	P35195	104 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	TRM7	P38238	310 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	SDS24	P38314	527 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	OM14	P38325	134 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	PRS3	P38689	320 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	PUG1	P40100	303 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	ICE2	P40499	491 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	YIR035C	P40579	254 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	GZF3	P42944	551 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	DUG1	P43616	481 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	CIN2	P46670	268 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	YJL016W	P47072	561 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	FLC3	P53121	802 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	FMP41	P53889	259 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	BRX1	Q08235	291 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	BTS1	Q12051	335 aa		2.69	□□□□□ -1.98
GCD6	YDR211W	RTC5	Q12108	567 aa	Known RBP	2.69	□□□□□ -1.98
GCD6	YDR211W	GAL4	P04386	881 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	PET494	P07390	489 aa	Predicted RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	RPB3	P16370	318 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	STE18	P18852	110 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	MGR1	P25573	417 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	LDS1	P31379	325 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	YKL162C	P36052	402 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	ATP3	P38077	311 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	ATG8	P38182	117 aa	RIP-Chip data	2.68	□□□□□ -1.98	not detected
GCD6	YDR211W	COS8	P38723	381 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	ASP1	P38986	381 aa	Predicted RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	MRX5	P47007	382 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	LOH1	P47055	219 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	PHB2	P50085	310 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	ARL3	Q02804	198 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	YHM2	Q04013	314 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	VBA4	Q04602	768 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	SEN15	Q04675	128 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	BER1	Q06688	274 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	RAD28	Q12021	506 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	ORT1	Q12375	292 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	RRI1	Q12468	440 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	TFB5	Q3E7C1	72 aa	Predicted RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	NAG1	Q8TGN9	163 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	MEX67	Q99257	599 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	DET1	Q99288	334 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	FSH3	Q99369	266 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	QCR7	P00128	127 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	TDH1	P00360	332 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	COX9	P07255	59 aa		2.68	□□□□□ -1.98
GCD6	YDR211W	SSA3	P09435	649 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	RPL20A	P0CX23	172 aa	Known RBP	2.68	□□□□□ -1.98
GCD6	YDR211W	RPL20B	P0CX24	172 aa	Predicted RBP	2.68	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms