RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C ATG17Q06410 417 aa3.04□□□□□ -1.92
SHU2YDR078C RFM1Q12192 310 aa3.04□□□□□ -1.92
SHU2YDR078C YCT1Q12235 531 aa3.04□□□□□ -1.92
SHU2YDR078C CUP2P15315 225 aa3.03□□□□□ -1.92
SHU2YDR078C RPB4P20433 221 aaPredicted RBP3.03□□□□□ -1.92
SHU2YDR078C YBR096WP38256 230 aa3.03□□□□□ -1.92
SHU2YDR078C YJR079WP47126 109 aa3.03□□□□□ -1.92
SHU2YDR078C SLX9P53251 210 aaPredicted RBP3.03□□□□□ -1.92
SHU2YDR078C OSH6Q02201 448 aa3.03□□□□□ -1.92
SHU2YDR078C CTF19Q02732 369 aa3.03□□□□□ -1.92
SHU2YDR078C PEX10Q05568 337 aa3.03□□□□□ -1.92
SHU2YDR078C NNT1Q05874 261 aa3.03□□□□□ -1.92
SHU2YDR078C YPR098CQ06089 161 aa3.03□□□□□ -1.92
SHU2YDR078C PLB3Q08108 686 aa3.03□□□□□ -1.92
SHU2YDR078C SGT2Q12118 346 aaKnown RBP3.03□□□□□ -1.92
SHU2YDR078C RHO1P06780 209 aaKnown RBP3.02□□□□□ -1.93
SHU2YDR078C ARG80P07249 177 aa3.02□□□□□ -1.93
SHU2YDR078C COS2P0CX12 379 aa3.02□□□□□ -1.93
SHU2YDR078C COS3P0CX13 379 aa3.02□□□□□ -1.93
SHU2YDR078C PRE7P23724 241 aaKnown RBP3.02□□□□□ -1.93
SHU2YDR078C YKT6P36015 200 aaKnown RBP3.02□□□□□ -1.93
SHU2YDR078C FZO1P38297 855 aa3.02□□□□□ -1.93
SHU2YDR078C COS4P43542 379 aa3.02□□□□□ -1.93
SHU2YDR078C RPC17P47076 161 aa3.02□□□□□ -1.93
SHU2YDR078C COQ10Q08058 207 aa3.02□□□□□ -1.93
SHU2YDR078C YPL264CQ08980 353 aa3.02□□□□□ -1.93
SHU2YDR078C ATG5Q12380 294 aa3.02□□□□□ -1.93
SHU2YDR078C MRPL25P23369 157 aa3.01□□□□□ -1.93
SHU2YDR078C RPL24BP24000 155 aaKnown RBP3.01□□□□□ -1.93
SHU2YDR078C DOA4P32571 926 aa3.01□□□□□ -1.93
SHU2YDR078C CSG2P35206 410 aa3.01□□□□□ -1.93
SHU2YDR078C YBL081WP38180 368 aaKnown RBP3.01□□□□□ -1.93
SHU2YDR078C THO1P40040 218 aaKnown RBP3.01□□□□□ -1.93
SHU2YDR078C RPE1P46969 238 aa3.01□□□□□ -1.93
SHU2YDR078C HST4P53688 370 aa3.01□□□□□ -1.93
SHU2YDR078C PGA2P53903 129 aa3.01□□□□□ -1.93
SHU2YDR078C AAH1P53909 347 aa3.01□□□□□ -1.93
SHU2YDR078C TVP15Q03860 143 aa3.01□□□□□ -1.93
SHU2YDR078C RRS1Q08746 203 aaKnown RBP3.01□□□□□ -1.93
SHU2YDR078C SNU23Q12368 194 aaPredicted RBP3.01□□□□□ -1.93
SHU2YDR078C YCR102CP25608 368 aa3□□□□□ -1.93
SHU2YDR078C PPA2P28239 310 aa3□□□□□ -1.93
SHU2YDR078C VPS21P36017 210 aaKnown RBP3□□□□□ -1.93
SHU2YDR078C ARN2P38724 620 aa3□□□□□ -1.93
SHU2YDR078C GOS1P38736 223 aa3□□□□□ -1.93
SHU2YDR078C YMR166CQ03829 368 aa3□□□□□ -1.93
SHU2YDR078C YKR104WP0CE69 306 aa2.99□□□□□ -1.93
SHU2YDR078C YAK1P14680 807 aa2.99□□□□□ -1.93
SHU2YDR078C VMA6P32366 345 aaKnown RBP2.99□□□□□ -1.93
SHU2YDR078C SLX1P38324 304 aa2.99□□□□□ -1.93
SHU2YDR078C SNZ3P43545 298 aa2.99□□□□□ -1.93
SHU2YDR078C YPL039WQ03080 316 aa2.99□□□□□ -1.93
SHU2YDR078C GTO3Q04806 366 aa2.99□□□□□ -1.93
SHU2YDR078C YPR147CQ06522 304 aaKnown RBP2.99□□□□□ -1.93
SHU2YDR078C GIS3Q12418 502 aa2.99□□□□□ -1.93
SHU2YDR078C ADF1Q2V2Q1 113 aa2.99□□□□□ -1.93
SHU2YDR078C NHP6BP11633 99 aaKnown RBP2.98□□□□□ -1.93
SHU2YDR078C PBN1P25580 416 aa2.98□□□□□ -1.93
SHU2YDR078C SGE1P33335 543 aa2.98□□□□□ -1.93
SHU2YDR078C YKL075CP36083 450 aa2.98□□□□□ -1.93
SHU2YDR078C TRM7P38238 310 aaKnown RBP2.98□□□□□ -1.93
SHU2YDR078C CPR7P47103 393 aa2.98□□□□□ -1.93
SHU2YDR078C ZRG17P53735 605 aa2.98□□□□□ -1.93
SHU2YDR078C RHO3Q00245 231 aaKnown RBP2.98□□□□□ -1.93
SHU2YDR078C SPG4Q04438 115 aa2.98□□□□□ -1.93
SHU2YDR078C YDR222WQ04925 415 aa2.98□□□□□ -1.93
SHU2YDR078C DCR2Q05924 578 aa2.98□□□□□ -1.93
SHU2YDR078C IES3Q12345 250 aa2.98□□□□□ -1.93
SHU2YDR078C THP2O13539 261 aaKnown RBP2.97□□□□□ -1.93
SHU2YDR078C YOL163WP0CF20 169 aa2.97□□□□□ -1.93
SHU2YDR078C DPB2P24482 689 aaPredicted RBP2.97□□□□□ -1.93
SHU2YDR078C MIC12P38341 106 aa2.97□□□□□ -1.93
SHU2YDR078C CUE1P38428 203 aa2.97□□□□□ -1.93
SHU2YDR078C YFR045WP43617 309 aa2.97□□□□□ -1.93
SHU2YDR078C MRH4P53166 561 aa2.97□□□□□ -1.93
SHU2YDR078C RSM27P53305 110 aa2.97□□□□□ -1.93
SHU2YDR078C SNZ2P53824 298 aa2.97□□□□□ -1.93
SHU2YDR078C RRP40Q08285 240 aaKnown RBP2.97□□□□□ -1.93
SHU2YDR078C PRR2Q12310 699 aa2.97□□□□□ -1.93
SHU2YDR078C YBL112CQ3E7Y4 105 aa2.97□□□□□ -1.93
SHU2YDR078C SEY1Q99287 776 aa2.97□□□□□ -1.93
SHU2YDR078C COQ1P18900 473 aa2.96□□□□□ -1.94
SHU2YDR078C DRE2P36152 348 aa2.96□□□□□ -1.94
SHU2YDR078C RTC3P38804 111 aaPredicted RBP2.96□□□□□ -1.94
SHU2YDR078C YHR127WP38833 243 aaKnown RBP2.96□□□□□ -1.94
SHU2YDR078C SUR2P38992 349 aa2.96□□□□□ -1.94
SHU2YDR078C COX15P40086 486 aa2.96□□□□□ -1.94
SHU2YDR078C YRB1P41920 201 aaKnown RBP2.96□□□□□ -1.94
SHU2YDR078C YPL150WQ12152 901 aa2.96□□□□□ -1.94
SHU2YDR078C YPS3Q12303 508 aa2.96□□□□□ -1.94
SHU2YDR078C PAN1P32521 1480 aa2.96□□□□□ -1.94
SHU2YDR078C YEL009C-AA0A023PZF2 135 aa2.95□□□□□ -1.94
SHU2YDR078C BMH1P29311 267 aaKnown RBP2.95□□□□□ -1.94
SHU2YDR078C CAB3P36076 571 aa2.95□□□□□ -1.94
SHU2YDR078C RIB1P38066 345 aa2.95□□□□□ -1.94
SHU2YDR078C SPL2P38839 148 aa2.95□□□□□ -1.94
SHU2YDR078C YHB1P39676 399 aaKnown RBP2.95□□□□□ -1.94
SHU2YDR078C YIR035CP40579 254 aa2.95□□□□□ -1.94
SHU2YDR078C OST3P48439 350 aa2.95□□□□□ -1.94
SHU2YDR078C NIF3P53081 288 aa2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 49.6 ms