RNA–Protein interactions for RNA: YDL213C

NOP6, Transcript of rRNA-binding protein required for 40S ribosomal subunit biogenesis, yeastyeast

Gene NOP6, Length 678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NOP6YDL213C MRPL49P40858 161 aaPredicted RBP3.38□□□□□ -1.87
NOP6YDL213C GAT1P43574 510 aa3.38□□□□□ -1.87
NOP6YDL213C TPS1Q00764 495 aaKnown RBP3.38□□□□□ -1.87
NOP6YDL213C SCS7Q03529 384 aa3.38□□□□□ -1.87
NOP6YDL213C SPG4Q04438 115 aa3.38□□□□□ -1.87
NOP6YDL213C HTZ1Q12692 134 aaKnown RBP3.38□□□□□ -1.87
NOP6YDL213C YKR104WP0CE69 306 aa3.37□□□□□ -1.87
NOP6YDL213C PET54P10834 293 aa3.37□□□□□ -1.87
NOP6YDL213C GRX2P17695 143 aaKnown RBP3.37□□□□□ -1.87
NOP6YDL213C DBF2P22204 572 aa3.37□□□□□ -1.87
NOP6YDL213C YCR022CP25620 114 aa3.37□□□□□ -1.87
NOP6YDL213C UBC8P28263 218 aa3.37□□□□□ -1.87
NOP6YDL213C FUN26P31381 517 aa3.37□□□□□ -1.87
NOP6YDL213C CAT2P32796 670 aaKnown RBP3.37□□□□□ -1.87
NOP6YDL213C MIX23P38162 196 aa3.37□□□□□ -1.87
NOP6YDL213C MRP21P38175 177 aa3.37□□□□□ -1.87
NOP6YDL213C MTC6P38849 526 aa3.37□□□□□ -1.87
NOP6YDL213C PET8P38921 284 aa3.37□□□□□ -1.87
NOP6YDL213C PAN6P40459 309 aa3.37□□□□□ -1.87
NOP6YDL213C YIL029CP40538 142 aa3.37□□□□□ -1.87
NOP6YDL213C MOB2P43563 287 aa3.37□□□□□ -1.87
NOP6YDL213C MDV1P47025 714 aa3.37□□□□□ -1.87
NOP6YDL213C IKS1P47042 667 aa3.37□□□□□ -1.87
NOP6YDL213C TOS8P53147 276 aa3.37□□□□□ -1.87
NOP6YDL213C SYF2P53277 215 aaPredicted RBP3.37□□□□□ -1.87
NOP6YDL213C COG5P53951 403 aa3.37□□□□□ -1.87
NOP6YDL213C PIR3Q03180 325 aa3.37□□□□□ -1.87
NOP6YDL213C YDR248CQ03786 193 aa3.37□□□□□ -1.87
NOP6YDL213C ARO80Q04052 950 aa3.37□□□□□ -1.87
NOP6YDL213C FAR10Q06001 478 aa3.37□□□□□ -1.87
NOP6YDL213C YLR036CQ07986 203 aa3.37□□□□□ -1.87
NOP6YDL213C YOR283WQ12040 230 aaKnown RBP3.37□□□□□ -1.87
NOP6YDL213C GCN3P14741 305 aa3.36□□□□□ -1.87
NOP6YDL213C MIR1P23641 311 aaKnown RBP3.36□□□□□ -1.87
NOP6YDL213C TAH1P25638 111 aaPredicted RBP3.36□□□□□ -1.87
NOP6YDL213C SEC1P30619 724 aaKnown RBP3.36□□□□□ -1.87
NOP6YDL213C UPS2P35200 230 aa3.36□□□□□ -1.87
NOP6YDL213C SRY1P36007 326 aa3.36□□□□□ -1.87
NOP6YDL213C YKR041WP36134 250 aa3.36□□□□□ -1.87
NOP6YDL213C CHL4P38907 458 aa3.36□□□□□ -1.87
NOP6YDL213C OXA1P39952 402 aa3.36□□□□□ -1.87
NOP6YDL213C YER076CP40049 302 aa3.36□□□□□ -1.87
NOP6YDL213C YMR144WP40214 342 aaKnown RBP3.36□□□□□ -1.87
NOP6YDL213C COS4P43542 379 aa3.36□□□□□ -1.87
NOP6YDL213C LCB3P47013 409 aa3.36□□□□□ -1.87
NOP6YDL213C CPR7P47103 393 aa3.36□□□□□ -1.87
NOP6YDL213C BXI1P48558 297 aa3.36□□□□□ -1.87
NOP6YDL213C SUN4P53616 420 aa3.36□□□□□ -1.87
NOP6YDL213C IDP3P53982 420 aaKnown RBP3.36□□□□□ -1.87
NOP6YDL213C TDA1Q03533 586 aa3.36□□□□□ -1.87
NOP6YDL213C YML096WQ04489 525 aa3.36□□□□□ -1.87
NOP6YDL213C YPR127WQ06494 345 aa3.36□□□□□ -1.87
NOP6YDL213C RRP40Q08285 240 aaKnown RBP3.36□□□□□ -1.87
NOP6YDL213C RPN8Q08723 338 aaKnown RBP3.36□□□□□ -1.87
NOP6YDL213C SFM1Q12314 213 aa3.36□□□□□ -1.87
NOP6YDL213C HRT3Q12347 344 aa3.36□□□□□ -1.87
NOP6YDL213C RDI1Q12434 202 aa3.36□□□□□ -1.87
NOP6YDL213C TAF2P23255 1407 aa3.36□□□□□ -1.87
NOP6YDL213C COX5AP00424 153 aa3.35□□□□□ -1.87
NOP6YDL213C CDC28P00546 298 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C RPS18AP0CX55 146 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C RPS18BP0CX56 146 aaPredicted RBP3.35□□□□□ -1.87
NOP6YDL213C RPL4AP10664 362 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C MRPL20P22354 195 aaPredicted RBP3.35□□□□□ -1.87
NOP6YDL213C SHE3P38272 425 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C BDH1P39714 382 aa3.35□□□□□ -1.87
NOP6YDL213C MAM33P40513 266 aa3.35□□□□□ -1.87
NOP6YDL213C CFD1P40558 293 aa3.35□□□□□ -1.87
NOP6YDL213C OST1P41543 476 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C AZF1P41696 914 aa3.35□□□□□ -1.87
NOP6YDL213C RPL4BP49626 362 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C COG7P53195 279 aa3.35□□□□□ -1.87
NOP6YDL213C UTP15Q04305 513 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C DYN3Q04949 312 aa3.35□□□□□ -1.87
NOP6YDL213C LIP2Q06005 328 aa3.35□□□□□ -1.87
NOP6YDL213C LOA1Q06508 300 aa3.35□□□□□ -1.87
NOP6YDL213C YPL245WQ12179 454 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C EFG1Q3E705 233 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C YDL085C-AQ3E7B7 68 aaKnown RBP3.35□□□□□ -1.87
NOP6YDL213C CMD1P06787 147 aaKnown RBP3.34□□□□□ -1.87
NOP6YDL213C MRS1P07266 363 aa3.34□□□□□ -1.87
NOP6YDL213C CUP2P15315 225 aa3.34□□□□□ -1.87
NOP6YDL213C IDP1P21954 428 aaKnown RBP3.34□□□□□ -1.87
NOP6YDL213C SEC22P22214 214 aa3.34□□□□□ -1.87
NOP6YDL213C ATG15P25641 520 aa3.34□□□□□ -1.87
NOP6YDL213C ARO7P32178 256 aa3.34□□□□□ -1.87
NOP6YDL213C MRPL39P36533 70 aa3.34□□□□□ -1.87
NOP6YDL213C HEK2P38199 381 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
NOP6YDL213C YBR062CP38239 180 aa3.34□□□□□ -1.87
NOP6YDL213C PEX22P39718 180 aa3.34□□□□□ -1.87
NOP6YDL213C PDS1P40316 373 aaPredicted RBP3.34□□□□□ -1.87
NOP6YDL213C PSA1P41940 361 aaKnown RBP3.34□□□□□ -1.87
NOP6YDL213C SNO3P43544 222 aa3.34□□□□□ -1.87
NOP6YDL213C FMP32P43557 207 aa3.34□□□□□ -1.87
NOP6YDL213C TPC1P53257 314 aa3.34□□□□□ -1.87
NOP6YDL213C NRM1P53718 249 aa3.34□□□□□ -1.87
NOP6YDL213C SDC1Q03323 175 aa3.34□□□□□ -1.87
NOP6YDL213C MAK3Q03503 176 aa3.34□□□□□ -1.87
NOP6YDL213C GAS2Q06135 555 aa3.34□□□□□ -1.87
NOP6YDL213C YLR030WQ07967 263 aa3.34□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 251.6 ms