RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YDL199CQ12407 687 aa1.42□□□□□ -2.18
TRM3YDL112W THP2O13539 261 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W RPL35AP0CX84 120 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W RPL35BP0CX85 120 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W CCA1P21269 546 aa1.42□□□□□ -2.18
TRM3YDL112W IDH1P28834 360 aaKnown RBP RIP-Chip data1.42□□□□□ -2.18not detected
TRM3YDL112W MET28P40573 187 aa1.42□□□□□ -2.18
TRM3YDL112W YDC1Q02896 317 aa1.42□□□□□ -2.18
TRM3YDL112W ABZ2Q03266 374 aa1.42□□□□□ -2.18
TRM3YDL112W DYN3Q04949 312 aa1.42□□□□□ -2.18
TRM3YDL112W MSI1P13712 422 aa1.42□□□□□ -2.18
TRM3YDL112W APE2P32454 952 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W YOX1P34161 385 aa1.42□□□□□ -2.18
TRM3YDL112W ISC1P40015 477 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W EGT2P42835 1041 aa1.42□□□□□ -2.18
TRM3YDL112W GEP7P53171 287 aa1.42□□□□□ -2.18
TRM3YDL112W COS6P53344 381 aa1.42□□□□□ -2.18
TRM3YDL112W DSL1P53847 754 aa1.42□□□□□ -2.18
TRM3YDL112W ASI1P54074 624 aa1.42□□□□□ -2.18
TRM3YDL112W GTB1Q04924 702 aa1.42□□□□□ -2.18
TRM3YDL112W DBP9Q06218 594 aaKnown RBP1.42□□□□□ -2.18
TRM3YDL112W MIM1Q08176 113 aa1.42□□□□□ -2.18
TRM3YDL112W YOR289WQ12012 251 aaPredicted RBP1.42□□□□□ -2.18
TRM3YDL112W RTR2Q12378 196 aa1.42□□□□□ -2.18
TRM3YDL112W MF(ALPHA)1P01149 165 aa1.41□□□□□ -2.18
TRM3YDL112W ILV5P06168 395 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W YOL162WP0CF19 215 aa1.41□□□□□ -2.18
TRM3YDL112W SSE2P32590 693 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W COS9P36034 407 aa1.41□□□□□ -2.18
TRM3YDL112W SKG1P36169 355 aa1.41□□□□□ -2.18
TRM3YDL112W RFC3P38629 340 aa1.41□□□□□ -2.18
TRM3YDL112W MTW1P39731 289 aa1.41□□□□□ -2.18
TRM3YDL112W YNL208WP40159 199 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W YIL060WP40519 144 aa1.41□□□□□ -2.18
TRM3YDL112W PFS2P42841 465 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W GCN20P43535 752 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W TOS2P50078 622 aa1.41□□□□□ -2.18
TRM3YDL112W RAX2Q12465 1220 aa1.41□□□□□ -2.18
TRM3YDL112W MHF2Q3E829 80 aa1.41□□□□□ -2.18
TRM3YDL112W CHO1P08456 276 aa1.41□□□□□ -2.18
TRM3YDL112W SPS4P09937 338 aa1.41□□□□□ -2.18
TRM3YDL112W YAK1P14680 807 aa1.41□□□□□ -2.18
TRM3YDL112W YNK1P36010 153 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W KRE29P40026 464 aa1.41□□□□□ -2.18
TRM3YDL112W XPT1P47165 209 aa1.41□□□□□ -2.18
TRM3YDL112W RMD9P53140 646 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W SCW4P53334 386 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W REX2P54964 269 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W AIM36Q03798 255 aa1.41□□□□□ -2.18
TRM3YDL112W ECM18Q04623 453 aa1.41□□□□□ -2.18
TRM3YDL112W MSA1Q08471 629 aa1.41□□□□□ -2.18
TRM3YDL112W FIT3Q08907 204 aa1.41□□□□□ -2.18
TRM3YDL112W ARG81P05085 880 aa1.41□□□□□ -2.18
TRM3YDL112W NAM2P11325 894 aa1.41□□□□□ -2.18
TRM3YDL112W RPC19P28000 142 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W ZUO1P32527 433 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W IES6P32617 166 aa1.41□□□□□ -2.18
TRM3YDL112W REC114P32841 428 aa1.41□□□□□ -2.18
TRM3YDL112W SUR1P33300 382 aa1.41□□□□□ -2.18
TRM3YDL112W ECM31P38122 312 aa1.41□□□□□ -2.18
TRM3YDL112W THI2P38141 450 aa1.41□□□□□ -2.18
TRM3YDL112W HEK2P38199 381 aaKnown RBP RIP-Chip data1.41□□□□□ -2.18not detected
TRM3YDL112W ARC40P38328 384 aaKnown RBP1.41□□□□□ -2.18
TRM3YDL112W ECM34P38728 170 aa1.41□□□□□ -2.18
TRM3YDL112W CIN2P46670 268 aa1.41□□□□□ -2.18
TRM3YDL112W DPB11P47027 764 aaPredicted RBP1.41□□□□□ -2.18
TRM3YDL112W YMR010WQ03687 405 aa1.41□□□□□ -2.18
TRM3YDL112W BNA7Q04066 261 aa1.41□□□□□ -2.18
TRM3YDL112W YPR098CQ06089 161 aa1.41□□□□□ -2.18
TRM3YDL112W RFU1Q08003 200 aa1.41□□□□□ -2.18
TRM3YDL112W BTS1Q12051 335 aa1.41□□□□□ -2.18
TRM3YDL112W TDH2P00358 332 aaKnown RBP1.4□□□□□ -2.18
TRM3YDL112W TDH3P00359 332 aaKnown RBP RIP-Chip data1.4□□□□□ -2.18not detected
TRM3YDL112W MSW1P04803 379 aa1.4□□□□□ -2.18
TRM3YDL112W CMK2P22517 447 aa1.4□□□□□ -2.18
TRM3YDL112W TFC1P32367 649 aa1.4□□□□□ -2.18
TRM3YDL112W VMA11P32842 164 aa1.4□□□□□ -2.18
TRM3YDL112W FZO1P38297 855 aa1.4□□□□□ -2.18
TRM3YDL112W YHR035WP38769 630 aa1.4□□□□□ -2.18
TRM3YDL112W ECM14P38836 430 aa1.4□□□□□ -2.18
TRM3YDL112W STB1P42845 420 aa1.4□□□□□ -2.18
TRM3YDL112W YGR168CP53293 376 aa1.4□□□□□ -2.18
TRM3YDL112W YNL095CP53932 642 aa1.4□□□□□ -2.18
TRM3YDL112W SFH1Q06168 426 aa1.4□□□□□ -2.18
TRM3YDL112W YOL159C-AQ3E769 90 aa1.4□□□□□ -2.18
TRM3YDL112W SOR1P35497 357 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W TRS85P46944 698 aa1.4□□□□□ -2.19
TRM3YDL112W YHC3P47040 408 aa1.4□□□□□ -2.19
TRM3YDL112W YNL033WP53964 284 aa1.4□□□□□ -2.19
TRM3YDL112W YNL019CP53975 284 aa1.4□□□□□ -2.19
TRM3YDL112W DIG2Q03373 323 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W DML1Q03652 475 aa1.4□□□□□ -2.19
TRM3YDL112W ARR2Q06597 130 aa1.4□□□□□ -2.19
TRM3YDL112W PRP11Q07350 266 aaPredicted RBP1.4□□□□□ -2.19
TRM3YDL112W SOR2Q07786 357 aa1.4□□□□□ -2.19
TRM3YDL112W YNL162W-AQ3E7A8 72 aa1.4□□□□□ -2.19
TRM3YDL112W PHO80P20052 293 aa1.4□□□□□ -2.19
TRM3YDL112W ELO2P25358 347 aa1.4□□□□□ -2.19
TRM3YDL112W DEG1P31115 442 aaKnown RBP1.4□□□□□ -2.19
TRM3YDL112W MRPL6P32904 214 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 44.7 ms