RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 FBXO22Q8NEZ5 403 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 ZFP42Q96MM3 310 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 GUCD1Q96NT3 240 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 CCDC94Q9BW85 323 aaPredicted RBP22.2■■□□□ 1.14
PTCD3-220ENST00000627371 PRDM12Q9H4Q4 367 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 TMEM206Q9H813 350 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 AAASQ9NRG9 546 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 GDAQ9Y2T3 454 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 STYXL1Q9Y6J8 313 aa22.2■■□□□ 1.14
PTCD3-220ENST00000627371 ATG2AQ2TAZ0 1938 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 ANKRD63C9JTQ0 380 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 RB1P06400 928 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 PSMD2Q13200 908 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 SLFN12LQ6IEE8 588 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 ELOA2Q8IYF1 753 aaPredicted RBP22.19■■□□□ 1.14
PTCD3-220ENST00000627371 THNSL1Q8IYQ7 743 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 GSTCDQ8NEC7 633 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 ZNF507Q8TCN5 953 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 CCDC47Q96A33 483 aaKnown RBP22.19■■□□□ 1.14
PTCD3-220ENST00000627371 RPS6KC1Q96S38 1066 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 PLVAPQ9BX97 442 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 IKZF4Q9H2S9 585 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 SLC39A2Q9NP94 309 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 KLK14Q9P0G3 267 aa22.19■■□□□ 1.14
PTCD3-220ENST00000627371 HOOK1Q9UJC3 728 aaKnown RBP22.19■■□□□ 1.14
PTCD3-220ENST00000627371 A0A0B4J269 797 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 TISP43B9A030 160 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 RHOBTB3O94955 611 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 POMCP01189 267 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 SCNN1GP51170 649 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 OSTNP61366 133 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 RNASELQ05823 741 aaKnown RBP22.18■■□□□ 1.14
PTCD3-220ENST00000627371 PNOCQ13519 176 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 KCNB1Q14721 858 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 SYCP3Q8IZU3 236 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 COLGALT1Q8NBJ5 622 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 KIAA0895Q8NCT3 520 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 SCFD1Q8WVM8 642 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 ACAP3Q96P50 834 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 NRDE2Q9H7Z3 1164 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 MIOSQ9NXC5 875 aa22.18■■□□□ 1.14
PTCD3-220ENST00000627371 OGTO15294 1046 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 FAM189A1O60320 539 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 HOXD13P35453 343 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 YARSP54577 528 aaKnown RBP22.17■■□□□ 1.14
PTCD3-220ENST00000627371 GRIK3Q13003 919 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 STK4Q13043 487 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 KYAT1Q16773 422 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 BMT2Q1RMZ1 405 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 GDPD5Q8WTR4 605 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 P2RX5Q93086 422 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 CDX2Q99626 313 aaPredicted RBP22.17■■□□□ 1.14
PTCD3-220ENST00000627371 C11orf84Q9BUA3 381 aaPredicted RBP22.17■■□□□ 1.14
PTCD3-220ENST00000627371 MSTO1Q9BUK6 570 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 TOPORSQ9NS56 1045 aaPredicted RBP22.17■■□□□ 1.14
PTCD3-220ENST00000627371 PCDHB12Q9Y5F1 795 aa22.17■■□□□ 1.14
PTCD3-220ENST00000627371 H3BNC9 293 aa22.16■■□□□ 1.14
PTCD3-220ENST00000627371 RFXAPO00287 272 aa22.16■■□□□ 1.14
PTCD3-220ENST00000627371 ZC3H11AO75152 810 aaKnown RBP eCLIP22.16■■□□□ 1.14
PTCD3-220ENST00000627371 ADSSP30520 456 aa22.16■■□□□ 1.14
PTCD3-220ENST00000627371 KCNT2Q6UVM3 1135 aa22.16■■□□□ 1.14
PTCD3-220ENST00000627371 ZNF280BQ86YH2 543 aa22.16■■□□□ 1.14
PTCD3-220ENST00000627371 POMGNT1Q8WZA1 660 aa22.16■■□□□ 1.14
PTCD3-220ENST00000627371 ZNF558Q96NG5 402 aa22.16■■□□□ 1.14
PTCD3-220ENST00000627371 FAM193BQ96PV7 902 aaPredicted RBP22.16■■□□□ 1.14
PTCD3-220ENST00000627371 CARNS1A5YM72 827 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 PTGESO14684 152 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 B4GALT3O60512 393 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 LPXNO60711 386 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 DDHD2O94830 711 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 CLTAP09496 248 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 BCAR1P56945 870 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 DSC1Q08554 894 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 GPM6BQ13491 265 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 SEZ6Q53EL9 994 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 XKR4Q5GH76 650 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 ALKAL1Q6UXT8 129 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 MYLIPQ8WY64 445 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 SNX27Q96L92 541 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 GAS2L1Q99501 681 aaPredicted RBP22.15■■□□□ 1.14
PTCD3-220ENST00000627371 TMEM175Q9BSA9 504 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 GBP3Q9H0R5 595 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 CXCL16Q9H2A7 254 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 LMBRD1Q9NUN5 540 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 DNAJB4Q9UDY4 337 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 AGO2Q9UKV8 859 aaKnown RBP22.15■■□□□ 1.14
PTCD3-220ENST00000627371 PLAGL2Q9UPG8 496 aa22.15■■□□□ 1.14
PTCD3-220ENST00000627371 SMC2O95347 1197 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 GARTP22102 1010 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 PPM1AP35813 382 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 PBX3P40426 434 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 TNFSF9P41273 254 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 ZBTB41Q5SVQ8 909 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 NELFCDQ8IXH7 590 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 COLGALT2Q8IYK4 626 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 KLHL23Q8NBE8 558 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 SPATA20Q8TB22 786 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 GSDMAQ96QA5 445 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 RMND1Q9NWS8 449 aa22.14■■□□□ 1.13
PTCD3-220ENST00000627371 CNTN3Q9P232 1028 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms