RNA–Protein interactions for RNA: ENST00000612899.4

TNFAIP3-206, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFAIP3, Length 4,735 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-206ENST00000612899 PRKCEQ02156 737 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 NCOA4Q13772 614 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 RASIP1Q5U651 963 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 CRLF3Q8IUI8 442 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 WDR75Q8IWA0 830 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 CYP26B1Q9NR63 512 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 PITPNM2Q9BZ72 1349 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 GYS1P13807 737 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 GMPSP49915 693 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 KRT17Q04695 432 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 NCAPHQ15003 741 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 C1orf228Q6PIY5 440 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 C18orf8Q96DM3 657 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 TTC25Q96NG3 672 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 TTC1Q99614 292 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 TIPINQ9BVW5 301 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 Q9H521 79 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 POLIQ9UNA4 740 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 SNX9Q9Y5X1 595 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 GOLGA8QA0A0J9YX86 632 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 GOLGA8OA6NCC3 632 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 GOLGA8NF8WBI6 632 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 DNAJC8O75937 253 aaPredicted RBP13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 TTC4O95801 387 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 KLRC1P26715 233 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 RANBP1P43487 201 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 AP3M2P53677 418 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 R3HDM1Q15032 1099 aaKnown RBP13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 SEC23AQ15436 765 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 SLC10A5Q5PT55 438 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 ATP6V1G3Q96LB4 118 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 ACAP3Q96P50 834 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 TSC22D3Q99576 134 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 ADAM33Q9BZ11 813 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 DCTN4Q9UJW0 460 aa13.26□□□□□ -0.29
TNFAIP3-206ENST00000612899 GMNCA6NCL1 334 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 HSPA4LO95757 839 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 MOCS2O96007 188 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 FGFR4P22455 802 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 ARSEP51690 589 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 DYNC1I2Q13409 638 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 TAF1BQ53T94 588 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 TRIM67Q6ZTA4 783 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 DTNBP1Q96EV8 351 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 TRIM51Q9BSJ1 452 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 MSH4O15457 936 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 DHX34Q14147 1143 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 NTRK3Q16288 839 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 HIPK4Q8NE63 616 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 SNF8Q96H20 258 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 FSD1LQ9BXM9 530 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 MYOZ2Q9NPC6 264 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 KCND2Q9NZV8 630 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 TARSL2A2RTX5 802 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 DPEP1P16444 411 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 OCRLQ01968 901 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 NAB2Q15742 525 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 SYT2Q8N9I0 419 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 CERKQ8TCT0 537 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 PDCD6IPQ8WUM4 868 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 ABCF3Q9NUQ8 709 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 PIN4Q9Y237 131 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 DYNC1LI2O43237 492 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 CYP11B2P19099 503 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 EMC2Q15006 297 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 KLHL38Q2WGJ6 581 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 EPC2Q52LR7 807 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 KCNV1Q6PIU1 500 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 ARMCX6Q7L4S7 300 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 SH2D3CQ8N5H7 860 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 NOA1Q8NC60 698 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 SDCCAG3Q96C92 435 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 SPDL1Q96EA4 605 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 TAAR1Q96RJ0 339 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 RBM12Q9NTZ6 932 aaKnown RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 EPS15L1Q9UBC2 864 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 CHORDC1Q9UHD1 332 aaPredicted RBP13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 HPSEQ9Y251 543 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 DIP2BQ9P265 1576 aa13.25□□□□□ -0.29
TNFAIP3-206ENST00000612899 RARBP10826 455 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 RGS7P49802 495 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 GRB10Q13322 594 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 ART3Q13508 389 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 KIAA1755Q5JYT7 1200 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 GJB7Q6PEY0 223 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 TTC39CQ8N584 583 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 PDZD8Q8NEN9 1154 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 RIN2Q8WYP3 895 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 ERGIC2Q96RQ1 377 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 KIFC3Q9BVG8 833 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 CACYBPQ9HB71 228 aaKnown RBP13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 CHCHD3Q9NX63 227 aaKnown RBP13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 LCMT1Q9UIC8 334 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 FRMPD1Q5SYB0 1578 aa13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 PLEKP08567 350 aaPredicted RBP13.24□□□□□ -0.29
TNFAIP3-206ENST00000612899 RFC1P35251 1148 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms