RNA–Protein interactions for RNA: ENST00000604024.5

CEP290-208, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-208ENST00000604024 GCSHP23434 173 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 PTGER1P34995 402 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 LSSP48449 732 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 CLRN1P58418 232 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 CD69Q07108 199 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 TP53BP2Q13625 1128 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 FAM214AQ32MH5 1076 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 LMBR1LQ6UX01 489 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 NPM2Q86SE8 214 aaKnown RBP2.06□□□□□ -2.08
CEP290-208ENST00000604024 SLC41A1Q8IVJ1 513 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 ZNF480Q8WV37 535 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 PGBD4Q96DM1 585 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 RAX2Q96IS3 184 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 ADGRE3Q9BY15 652 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 RNPEPQ9H4A4 650 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 TOMM22Q9NS69 142 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 TBCCD1Q9NVR7 557 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 LRIT1Q9P2V4 623 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 PTCH2Q9Y6C5 1203 aa2.06□□□□□ -2.08
CEP290-208ENST00000604024 OPA1O60313 960 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 LPXNO60711 386 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 NCR1O76036 304 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 F2P00734 622 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 NFE2L2Q16236 605 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 KIAA0895LQ68EN5 471 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 SYT12Q8IV01 421 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 SPATA3Q8NHX4 192 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 TFAP2CQ92754 450 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 FUBP3Q96I24 572 aaKnown RBP eCLIP2.05□□□□□ -2.08
CEP290-208ENST00000604024 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.05□□□□□ -2.08
CEP290-208ENST00000604024 KCTD5Q9NXV2 234 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 ARPP21Q9UBL0 812 aaPredicted RBP2.05□□□□□ -2.08
CEP290-208ENST00000604024 ELL2O00472 640 aaPredicted RBP2.05□□□□□ -2.08
CEP290-208ENST00000604024 C1QL1O75973 258 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 SPDEFO95238 335 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 MATN4O95460 622 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 SRGNP10124 158 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 FOLR3P41439 243 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 RBM25P49756 843 aaKnown RBP2.05□□□□□ -2.08
CEP290-208ENST00000604024 SLC10A2Q12908 348 aaPredicted RBP2.05□□□□□ -2.08
CEP290-208ENST00000604024 SP5Q6BEB4 398 aaPredicted RBP2.05□□□□□ -2.08
CEP290-208ENST00000604024 GPR149Q86SP6 731 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 COLGALT2Q8IYK4 626 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 RNF181Q9P0P0 153 aa2.05□□□□□ -2.08
CEP290-208ENST00000604024 RGS17Q9UGC6 210 aaPredicted RBP2.05□□□□□ -2.08
CEP290-208ENST00000604024 PROM1O43490 865 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 ATP2A2P16615 1042 aaKnown RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 OCA2Q04671 838 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 PTPRRQ15256 657 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 NAALADL2Q58DX5 795 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 ATXN7L2Q5T6C5 722 aaPredicted RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 OTUD7BQ6GQQ9 843 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 CASKIN2Q8WXE0 1202 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 DNAJC7Q99615 494 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 BCO1Q9HAY6 547 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 SPON1Q9HCB6 807 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 KLHL11Q9NVR0 708 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 FLRT1Q9NZU1 646 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 ZNF70Q9UC06 446 aaPredicted RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 UTP18Q9Y5J1 556 aaKnown RBP eCLIP2.04□□□□□ -2.08
CEP290-208ENST00000604024 ENTPD2Q9Y5L3 495 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 DRGXA6NNA5 263 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 LEFTY2O00292 366 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 GAS7O60861 476 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 IL2RBP14784 551 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 SSBP2P81877 361 aaPredicted RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 CFAP100Q494V2 611 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 ZNF572Q7Z3I7 529 aaPredicted RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 OR14C36Q8NHC7 312 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 HASPINQ8TF76 798 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 GAB3Q8WWW8 586 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 PODXL2Q9NZ53 605 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 MOCS1Q9NZB8 636 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 TESQ9UGI8 421 aaKnown RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 TMPRSS11EQ9UL52 423 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 CDY2AQ9Y6F7 541 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 RPTORQ8N122 1335 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 LMTK3Q96Q04 1460 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 FAM221BA6H8Z2 402 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 DNAJC9-AS1A6NH13 148 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 GCOM1H8Y6P7 765 aaPredicted RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 MPPED1O15442 326 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 POMCP01189 267 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 ZNF81P51508 661 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 SIM1P81133 766 aaPredicted RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 SF3A1Q15459 793 aaKnown RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 RRP12Q5JTH9 1297 aaKnown RBP2.04□□□□□ -2.08
CEP290-208ENST00000604024 ZNF425Q6IV72 752 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 C11orf87Q6NUJ2 197 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 SEM1Q6ZVN7 128 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 SH2D3CQ8N5H7 860 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 SARAFQ96BY9 339 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 ACAP3Q96P50 834 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 KIAA1586Q9HCI6 787 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 POGKQ9P215 609 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 PRSS50Q9UI38 385 aa2.04□□□□□ -2.08
CEP290-208ENST00000604024 PRSS38A1L453 326 aa2.03□□□□□ -2.08
CEP290-208ENST00000604024 PRKCGP05129 697 aa2.03□□□□□ -2.08
CEP290-208ENST00000604024 SLC9A1P19634 815 aa2.03□□□□□ -2.08
CEP290-208ENST00000604024 KPNA1P52294 538 aaPredicted RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms