RNA–Protein interactions for RNA: ENST00000587502.2

LSM7-204, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM7, Length 575 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-204ENST00000587502 ACO2Q99798 780 aaKnown RBP25.64■■□□□ 1.7
LSM7-204ENST00000587502 ADAM28Q9UKQ2 775 aa25.64■■□□□ 1.7
LSM7-204ENST00000587502 USP20Q9Y2K6 914 aa25.64■■□□□ 1.7
LSM7-204ENST00000587502 H0YCG3 227 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 TADA2AO75478 443 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 EFEMP2O95967 443 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 EDN1P05305 212 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 CNPP09543 421 aaKnown RBP25.63■■□□□ 1.69
LSM7-204ENST00000587502 SYT1P21579 422 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 GLUD2P49448 558 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 ELMSAN1Q6PJG2 1045 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 RASSF8Q8NHQ8 419 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 DPP7Q9UHL4 492 aa25.63■■□□□ 1.69
LSM7-204ENST00000587502 ADH1AP07327 375 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 MTHFRP42898 656 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 DSG1Q02413 1049 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 STRN3Q13033 797 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 HSP90AA2PQ14568 343 aaPredicted RBP25.62■■□□□ 1.69
LSM7-204ENST00000587502 USP41Q3LFD5 358 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 RNF135Q8IUD6 432 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 RIPOR3Q96MK2 946 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 APOL5Q9BWW9 433 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 LARSQ9P2J5 1176 aaKnown RBP25.62■■□□□ 1.69
LSM7-204ENST00000587502 GDAQ9Y2T3 454 aa25.62■■□□□ 1.69
LSM7-204ENST00000587502 SFI1A8K8P3 1242 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 SLC16A4O15374 487 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 C1RP00736 705 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 EPCAMP16422 314 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 SCP2P22307 547 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 CLCN4P51793 760 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 YARSP54577 528 aaKnown RBP25.61■■□□□ 1.69
LSM7-204ENST00000587502 CREMQ03060 361 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 HERC4Q5GLZ8 1057 aaPredicted RBP25.61■■□□□ 1.69
LSM7-204ENST00000587502 KIAA0319Q5VV43 1072 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 FUT10Q6P4F1 479 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 TAS1R1Q7RTX1 841 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 CCDC94Q9BW85 323 aaPredicted RBP25.61■■□□□ 1.69
LSM7-204ENST00000587502 RXFP1Q9HBX9 757 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 PTPRHQ9HD43 1115 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.61■■□□□ 1.691e-8■□□□□ 11.3
LSM7-204ENST00000587502 TOPORSQ9NS56 1045 aaPredicted RBP25.61■■□□□ 1.69
LSM7-204ENST00000587502 CHST7Q9NS84 486 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 ODF2LQ9ULJ1 636 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 NR2E1Q9Y466 385 aa25.61■■□□□ 1.69
LSM7-204ENST00000587502 SF3B1O75533 1304 aaKnown RBP eCLIP25.61■■□□□ 1.692e-7■■■■■ 93.6
LSM7-204ENST00000587502 C2CD2LO14523 706 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 PTGESO14684 152 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 RAD51AP2Q09MP3 1159 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 ZNF568Q3ZCX4 644 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 ATAT1Q5SQI0 421 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 RPGRIP1Q96KN7 1286 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 FBXL18Q96ME1 805 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 TCHPQ9BT92 498 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 LRFN3Q9BTN0 628 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 ZSCAN16Q9H4T2 348 aaPredicted RBP25.6■■□□□ 1.69
LSM7-204ENST00000587502 SFXN1Q9H9B4 322 aa25.6■■□□□ 1.69
LSM7-204ENST00000587502 SPDYE4A6NLX3 237 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 MCF2P10911 925 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 GRM5P41594 1212 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 RESTQ13127 1097 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 RARS2Q5T160 578 aaKnown RBP25.59■■□□□ 1.69
LSM7-204ENST00000587502 TAS1R3Q7RTX0 852 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 TMEM161BQ8NDZ6 487 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 TARS2Q9BW92 718 aaKnown RBP25.59■■□□□ 1.69
LSM7-204ENST00000587502 CCSER1Q9C0I3 900 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 RAPGEFL1Q9UHV5 662 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 CLIC4Q9Y696 253 aa25.59■■□□□ 1.69
LSM7-204ENST00000587502 CASTOR2A6NHX0 329 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 BRD1O95696 1058 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 ELAVL2Q12926 359 aaKnown RBP25.58■■□□□ 1.69
LSM7-204ENST00000587502 ARSHQ5FYA8 562 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 MPZL3Q6UWV2 235 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 GPBP1Q86WP2 473 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 GPR62Q9BZJ7 368 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 CDT1Q9H211 546 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 FNIP2Q9P278 1114 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 MUTYHQ9UIF7 546 aa25.58■■□□□ 1.69
LSM7-204ENST00000587502 MYH11P35749 1972 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 PRR33A8MZF0 331 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 F8W810 466 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 TEX28O15482 410 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 TOM1L1O75674 476 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 MAPTP10636 758 aaKnown RBP25.57■■□□□ 1.68
LSM7-204ENST00000587502 PLCG1P19174 1290 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 PROZP22891 400 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 KARSQ15046 597 aaKnown RBP25.57■■□□□ 1.68
LSM7-204ENST00000587502 PTPAQ15257 358 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 NAB2Q15742 525 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 ZPBP2Q6X784 338 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 RAD54LQ92698 747 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 KCNN1Q92952 543 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 UROC1Q96N76 676 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 C11orf16Q9NQ32 467 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 CCDC39Q9UFE4 941 aa25.57■■□□□ 1.68
LSM7-204ENST00000587502 SRPRBQ9Y5M8 271 aaKnown RBP25.57■■□□□ 1.68
LSM7-204ENST00000587502 MORC2Q9Y6X9 1032 aaPredicted RBP25.57■■□□□ 1.68
LSM7-204ENST00000587502 STX6O43752 255 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 GLUD1P00367 558 aa25.56■■□□□ 1.68
LSM7-204ENST00000587502 PDIA4P13667 645 aaKnown RBP25.56■■□□□ 1.68
LSM7-204ENST00000587502 ABCD1P33897 745 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms