RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 KLK14Q9P0G3 267 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 FAN1Q9Y2M0 1017 aa17.26■□□□□ 0.35
USB1-208ENST00000563207 TMEM221A6NGB7 291 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 C2CD4DB7Z1M9 353 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 M0R296 226 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 C2CD2LO14523 706 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 LILRB3O75022 631 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 NPTXRO95502 500 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 ALDH2P05091 517 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 CNPP09543 421 aaKnown RBP17.25■□□□□ 0.35
USB1-208ENST00000563207 SRGAP2BP0DMP2 458 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 HOXB8P17481 243 aaPredicted RBP17.25■□□□□ 0.35
USB1-208ENST00000563207 SLC12A3P55017 1021 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 POU5F1BQ06416 359 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 IER5LQ5T953 404 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 NOTUMQ6P988 496 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 TMC5Q6UXY8 1006 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 KCNK18Q7Z418 384 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 COLGALT2Q8IYK4 626 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 IQUBQ8NA54 791 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 LARP4BQ92615 738 aaKnown RBP17.25■□□□□ 0.35
USB1-208ENST00000563207 RAD54LQ92698 747 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 CHAMP1Q96JM3 812 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 FBXL18Q96ME1 805 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 KLHL5Q96PQ7 755 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 FAM193BQ96PV7 902 aaPredicted RBP17.25■□□□□ 0.35
USB1-208ENST00000563207 PLIN2Q99541 437 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 IRAK3Q9Y616 596 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 MYH11P35749 1972 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 C2orf16Q68DN1 1984 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 MYO10Q9HD67 2058 aa17.25■□□□□ 0.35
USB1-208ENST00000563207 GOLGA6L4A6NEF3 574 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 GUCY2CP25092 1073 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 STAT6P42226 847 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 OR1G1P47890 313 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 TFDP1Q14186 410 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 RINT1Q6NUQ1 792 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 CLEC17AQ6ZS10 378 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 C1orf186Q6ZWK4 172 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 KIFAP3Q92845 792 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 LRRC27Q9C0I9 530 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 BLOC1S4Q9NUP1 217 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 ARIH1Q9Y4X5 557 aaPredicted RBP17.24■□□□□ 0.35
USB1-208ENST00000563207 ZNF318Q5VUA4 2279 aa17.24■□□□□ 0.35
USB1-208ENST00000563207 CNTNAP2Q9UHC6 1331 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 FAM237AA0A1B0GTK4 181 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 FSD2A1L4K1 749 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 LRRIQ4A6NIV6 560 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 EFEMP2O95967 443 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 PDGFBP01127 241 aaPredicted RBP17.23■□□□□ 0.35
USB1-208ENST00000563207 AXLP30530 894 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 HOXD11P31277 338 aaPredicted RBP17.23■□□□□ 0.35
USB1-208ENST00000563207 DSC1Q08554 894 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 TPRNQ4KMQ1 711 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 SV2BQ7L1I2 683 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 PBXIP1Q96AQ6 731 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 DRC1Q96MC2 740 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 PAAF1Q9BRP4 392 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 TMEM175Q9BSA9 504 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 C17orf75Q9HAS0 396 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 GDPD2Q9HCC8 539 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 KANSL3Q9P2N6 904 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 USP25Q9UHP3 1055 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 KCNH3Q9ULD8 1083 aa17.23■□□□□ 0.35
USB1-208ENST00000563207 DENND4AQ7Z401 1863 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 KMT2EQ8IZD2 1858 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 A0A1B0GUA9 196 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 INPPL1O15357 1258 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 ASGR2P07307 311 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 IGFBP6P24592 240 aaPredicted RBP17.22■□□□□ 0.35
USB1-208ENST00000563207 CLCN4P51793 760 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 AMPD3Q01432 767 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 PPP2R5AQ15172 486 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 PTPN21Q16825 1174 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 PDILTQ8N807 584 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 ASIC4Q96FT7 647 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 KIFC3Q9BVG8 833 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 NFKBIZQ9BYH8 718 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 PANK2Q9BZ23 570 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 TNMDQ9H2S6 317 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 ODF2LQ9ULJ1 636 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
USB1-208ENST00000563207 MUC6Q6W4X9 2439 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 POLR2DO15514 142 aaKnown RBP17.21■□□□□ 0.35
USB1-208ENST00000563207 SPATA31D3P0C874 917 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 LIG1P18858 919 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 KLRC2P26717 231 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 ITIH3Q06033 890 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 MCM6Q14566 821 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 PCBP1Q15365 356 aaKnown RBP eCLIP17.21■□□□□ 0.35
USB1-208ENST00000563207 E2F4Q16254 413 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 KIAA0319Q5VV43 1072 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 SLC27A1Q6PCB7 646 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 SPATA31D4Q6ZUB0 917 aa17.21■□□□□ 0.35
USB1-208ENST00000563207 RNF168Q8IYW5 571 aaPredicted RBP17.21■□□□□ 0.35
USB1-208ENST00000563207 CNNM3Q8NE01 707 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms