RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 MSLNLQ96KJ4 702 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ZFP42Q96MM3 310 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KIFC3Q9BVG8 833 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 COLEC11Q9BWP8 271 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CCSER1Q9C0I3 900 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 NXF3Q9H4D5 531 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SNTG2Q9NY99 539 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 KLK14Q9P0G3 267 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 CLEC1BQ9P126 229 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 USP20Q9Y2K6 914 aa10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SRPRBQ9Y5M8 271 aaKnown RBP10.71□□□□□ -0.69
TNFRSF1A-214ENST00000543048 SLC16A4O15374 487 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MBTPS2O43462 519 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 B4GALT3O60512 393 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TBX10O75333 385 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 EDN1P05305 212 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 HSP90AA1P07900 732 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SRGAP2BP0DMP2 458 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CTSAP10619 480 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PLS3P13797 630 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 IL9P15248 144 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MARCKSP29966 332 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DDIT3P35638 169 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MLH1P40692 756 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 OR1G1P47890 313 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SCNN1GP51170 649 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CEBPZQ03701 1054 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DSC1Q08554 894 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RAD51AP2Q09MP3 1159 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 COASYQ13057 564 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SLC39A14Q15043 492 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CLUL1Q15846 466 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DCAF4L1Q3SXM0 396 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 VARS2Q5ST30 1063 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ATF7IP2Q5U623 682 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 EEF1DP3Q658K8 133 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TMEM173Q86WV6 379 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TMEM87AQ8NBN3 555 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GSTCDQ8NEC7 633 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RASSF8Q8NHQ8 419 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 BCL7CQ8WUZ0 217 aaPredicted RBP10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ACO2Q99798 780 aaKnown RBP10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZBP1Q9H171 429 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 BLOC1S4Q9NUP1 217 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TNFSF13BQ9Y275 285 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 IRAK3Q9Y616 596 aa10.7□□□□□ -0.7
TNFRSF1A-214ENST00000543048 NPHP3-ACAD11A0A0J9YXS1 232 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CLASP2O75122 1294 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GLP2RO95838 553 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PLCG1P19174 1290 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CA8P35219 290 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GRIK3Q13003 919 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SMAD4Q13485 552 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KCNC3Q14003 757 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 DHX8Q14562 1220 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MCM6Q14566 821 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KARSQ15046 597 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SMAD2Q15796 467 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GPBP1Q86WP2 473 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RAD54LQ92698 747 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 EPSTI1Q96J88 318 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RPS6KC1Q96S38 1066 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MRPL4Q9BYD3 311 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PTPRHQ9HD43 1115 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 LARSQ9P2J5 1176 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ARHGAP28Q9P2N2 729 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CCDC39Q9UFE4 941 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PRKAG3Q9UGI9 489 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 FBXO2Q9UK22 296 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SSX2IPQ9Y2D8 614 aa10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MORC2Q9Y6X9 1032 aaPredicted RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 PDCD11Q14690 1871 aaKnown RBP10.69□□□□□ -0.7
TNFRSF1A-214ENST00000543048 H0YCG3 227 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 LILRB3O75022 631 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KRT18P05783 430 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 THP07101 528 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 HOXB8P17481 243 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 STRN3Q13033 797 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 STK38Q15208 465 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 SPECC1Q5M775 1068 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 RRAGBQ5VZM2 374 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ANKRD54Q6NXT1 300 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 LLGL2Q6P1M3 1020 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 USP49Q70CQ1 688 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TAS1R3Q7RTX0 852 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 GJD3Q8N144 294 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 MYCT1Q8N699 235 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 KRI1Q8N9T8 703 aaKnown RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TMEM161BQ8NDZ6 487 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 VN1R2Q8NFZ6 395 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 LRRC15Q8TF66 581 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 AUTS2Q8WXX7 1259 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CASP10Q92851 521 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 ZNF396Q96N95 335 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 CLIC6Q96NY7 704 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 USP28Q96RU2 1077 aa10.68□□□□□ -0.7
TNFRSF1A-214ENST00000543048 TCHPQ9BT92 498 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 92.4 ms