RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SNTG2Q9NY99 539 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 USP20Q9Y2K6 914 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 KIF3AQ9Y496 699 aa23.21■■□□□ 1.31
VSX1-206ENST00000444511 SF3B1O75533 1304 aaKnown RBP eCLIP23.2■■□□□ 1.3
VSX1-206ENST00000444511 CCDC195A0A1B0GUA6 201 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 RECQL4O94761 1208 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 MYBP10242 640 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 EFNA5P52803 228 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 VCPP55072 806 aaKnown RBP23.2■■□□□ 1.3
VSX1-206ENST00000444511 PALB2Q86YC2 1186 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 KIFC3Q9BVG8 833 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 POLD4Q9HCU8 107 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 CACNG4Q9UBN1 327 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 PCDHB6Q9Y5E3 794 aa23.2■■□□□ 1.3
VSX1-206ENST00000444511 TDRD15B5MCY1 1934 aaKnown RBP23.2■■□□□ 1.3
VSX1-206ENST00000444511 CASTOR2A6NHX0 329 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 PDGFBP01127 241 aaPredicted RBP23.19■■□□□ 1.3
VSX1-206ENST00000444511 THP07101 528 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 AVPR2P30518 371 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 MRE11P49959 708 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 TOB1P50616 345 aaPredicted RBP23.19■■□□□ 1.3
VSX1-206ENST00000444511 CREMQ03060 361 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 CYP26C1Q6V0L0 522 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 GLYCTKQ8IVS8 523 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 GPR65Q8IYL9 337 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 IGSF22Q8N9C0 903 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 PAAF1Q9BRP4 392 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 SMOC2Q9H3U7 446 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 FNIP2Q9P278 1114 aa23.19■■□□□ 1.3
VSX1-206ENST00000444511 LAD1O00515 517 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 PTGESO14684 152 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 SPATA31D3P0C874 917 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 RABEP1Q15276 862 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 DCAF4L1Q3SXM0 396 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 KRT79Q5XKE5 535 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 EEF1DP3Q658K8 133 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 SPATA31D4Q6ZUB0 917 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 HASPINQ8TF76 798 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 HDAC7Q8WUI4 952 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 PLEKHA4Q9H4M7 779 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 DNM3Q9UQ16 869 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 GDAQ9Y2T3 454 aa23.18■■□□□ 1.3
VSX1-206ENST00000444511 TGM5O43548 720 aa23.17■■□□□ 1.3
VSX1-206ENST00000444511 ST18O60284 1047 aa23.17■■□□□ 1.3
VSX1-206ENST00000444511 RFPL2O75678 378 aa23.17■■□□□ 1.3
VSX1-206ENST00000444511 C1RP00736 705 aa23.17■■□□□ 1.3
VSX1-206ENST00000444511 EDN1P05305 212 aa23.17■■□□□ 1.3
VSX1-206ENST00000444511 ATF7IP2Q5U623 682 aa23.17■■□□□ 1.3
VSX1-206ENST00000444511 APBB1IPQ7Z5R6 666 aaPredicted RBP23.17■■□□□ 1.3
VSX1-206ENST00000444511 SMG7Q92540 1137 aaKnown RBP23.17■■□□□ 1.3
VSX1-206ENST00000444511 DAXXQ9UER7 740 aaPredicted RBP23.17■■□□□ 1.3
VSX1-206ENST00000444511 K7ERI5 159 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 KIF4AO95239 1232 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 RPL17P18621 184 aaKnown RBP23.16■■□□□ 1.3
VSX1-206ENST00000444511 RTP2Q5QGT7 225 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 MCTP1Q6DN14 999 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 PRSS55Q6UWB4 352 aaPredicted RBP23.16■■□□□ 1.3
VSX1-206ENST00000444511 DTHD1Q6ZMT9 781 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 STAMQ92783 540 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 RHOBTB2Q9BYZ6 727 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 PIDD1Q9HB75 910 aa23.16■■□□□ 1.3
VSX1-206ENST00000444511 WDR6Q9NNW5 1121 aaKnown RBP23.16■■□□□ 1.3
VSX1-206ENST00000444511 DENND4AQ7Z401 1863 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 CLUHO75153 1309 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 CCDC169A6NNP5 214 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 PP2D1A8MPX8 630 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 E9PMD0 336 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 GBP2P32456 591 aaPredicted RBP23.15■■□□□ 1.3
VSX1-206ENST00000444511 PRPHP41219 470 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 TCF15Q12870 199 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 NT5DC1Q5TFE4 455 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 FAM171A1Q5VUB5 890 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 CEP57Q86XR8 500 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 TTPALQ9BTX7 342 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 CXCL16Q9H2A7 254 aa23.15■■□□□ 1.3
VSX1-206ENST00000444511 WDFY4Q6ZS81 3184 aa23.14■■□□□ 1.3
VSX1-206ENST00000444511 PIEZO1Q92508 2521 aa23.14■■□□□ 1.3
VSX1-206ENST00000444511 PEX3P56589 373 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 ELAVL2Q12926 359 aaKnown RBP23.14■■□□□ 1.29
VSX1-206ENST00000444511 TDGQ13569 410 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 NAB2Q15742 525 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 LILRA6Q6PI73 481 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 ZNF707Q96C28 371 aaPredicted RBP23.14■■□□□ 1.29
VSX1-206ENST00000444511 NT5C3AQ9H0P0 336 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 MFSD1Q9H3U5 465 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 KCNK12Q9HB15 430 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.14■■□□□ 1.29
VSX1-206ENST00000444511 ZDHHC7Q9NXF8 308 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 ZDBF2Q9HCK1 2354 aa23.14■■□□□ 1.29
VSX1-206ENST00000444511 PLXNA3P51805 1871 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 KMT2EQ8IZD2 1858 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 PHLPP2Q6ZVD8 1323 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 HIP1RO75146 1068 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 CDC25AP30304 524 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 NPTX2P47972 431 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 DMP1Q13316 513 aaPredicted RBP23.13■■□□□ 1.29
VSX1-206ENST00000444511 IL17AQ16552 155 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 RILPL1Q5EBL4 403 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 PIK3R5Q8WYR1 880 aa23.13■■□□□ 1.29
VSX1-206ENST00000444511 DRC1Q96MC2 740 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms