RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 TIMM44O43615 452 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 KIF1CO43896 1103 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 PPP6R2O75170 966 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 CCNE2O96020 404 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 PDGFAP04085 211 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 LGALS2P05162 132 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 RPLP1P05386 114 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 P4HBP07237 508 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 EN2P19622 333 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 MARK3P27448 753 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 MZF1P28698 734 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 DDIT3P35638 169 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 LONP1P36776 959 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 CCT6AP40227 531 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 UBA7P41226 1012 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 ME1P48163 572 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 NASPP49321 788 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 SLC26A2P50443 739 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 ACLYP53396 1101 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 SOX10P56693 466 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 PSMC5P62195 406 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 DMTNQ08495 405 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 PDIA5Q14554 519 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 ZRSR1Q15695 479 aaKnown RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 CCDC92Q53HC0 331 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 FAM47CQ5HY64 1035 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 CXCL17Q6UXB2 119 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 NECAB2Q7Z6G3 386 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 NT5DC4Q86YG4 428 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 C7orf31Q8N865 590 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 C4orf32Q8N8J7 132 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 LINC00301Q8NCQ3 95 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 VPS37AQ8NEZ2 397 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 SNX29Q8TEQ0 813 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 CALML4Q96GE6 196 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 FAM167AQ96KS9 214 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 AK8Q96MA6 479 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 FTOQ9C0B1 505 aaKnown RBP eCLIP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 TSPYL1Q9H0U9 437 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 RBSNQ9H1K0 784 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 C11orf49Q9H6J7 331 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 TUFT1Q9NNX1 390 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 NRBP2Q9NSY0 501 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 ABI2Q9NYB9 513 aaPredicted RBP6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 ERAP1Q9NZ08 941 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 FRRS1LQ9P0K9 344 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 CCDC39Q9UFE4 941 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 VAV3Q9UKW4 847 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 POLIQ9UNA4 740 aa6.84□□□□□ -1.31
ECHDC1-208ENST00000436638 EMSYQ7Z589 1322 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 KDM3AQ9Y4C1 1321 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A1W2PQ45 241 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 A0A1W2PQY0 241 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 A6NHS1 94 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 H3BRB1 525 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 TLR3O15455 904 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 HBP1O60381 514 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 CUTAO60888 179 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 LETM1O95202 739 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 ZNF286BP0CG31 522 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 SPATA31C1P0DKV0 1188 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 GNAT1P11488 350 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 SOX18P35713 384 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 QARSP47897 775 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 TBX4P57082 545 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 PURAQ00577 322 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 HYAL2Q12891 473 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 ITGA7Q13683 1181 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 CTTNQ14247 550 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 PTPAQ15257 358 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 KIAA0753Q2KHM9 967 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 PDE12Q6L8Q7 609 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 ABHD15Q6UXT9 468 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 OTUD6AQ7L8S5 288 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 PLPPR4Q7Z2D5 763 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 TRMT1LQ7Z2T5 733 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 CABP7Q86V35 215 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 ANKRD13BQ86YJ7 626 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 TPH2Q8IWU9 490 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 DMRTC2Q8IXT2 367 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 OR13H1Q8NG92 308 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 AFAP1L1Q8TED9 768 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 CCDC47Q96A33 483 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 PLD4Q96BZ4 506 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 DYDC2Q96IM9 177 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 PAWRQ96IZ0 340 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 GBP4Q96PP9 640 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 EIF2AK1Q9BQI3 630 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 SEZ6LQ9BYH1 1024 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 NT5C3AQ9H0P0 336 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 CSRNP2Q9H175 543 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 ZHX3Q9H4I2 956 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 CXorf56Q9H5V9 222 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 TUT1Q9H6E5 874 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 ZSWIM4Q9H7M6 989 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 TMEM63CQ9P1W3 806 aa6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 SRPRBQ9Y5M8 271 aaKnown RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 MORC2Q9Y6X9 1032 aaPredicted RBP6.83□□□□□ -1.32
ECHDC1-208ENST00000436638 IGKV6D-21A0A0A0MT36 114 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms