RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 TMEM161BQ8NDZ6 487 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 BICD1Q96G01 975 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 NTPCRQ9BSD7 190 aaKnown RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 CCDC94Q9BW85 323 aaPredicted RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 CDT1Q9H211 546 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 PARVGQ9HBI0 331 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 MARCH5Q9NX47 278 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 CLEC1BQ9P126 229 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 ANKFY1Q9P2R3 1169 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
UPK3A-202ENST00000396082 CUL9Q8IWT3 2517 aa19.2■□□□□ 0.66
UPK3A-202ENST00000396082 K7ENM7 598 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 SPTLC2O15270 562 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 MBTPS2O43462 519 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 F13A1P00488 732 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 URODP06132 367 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 THP07101 528 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 MAPTP10636 758 aaKnown RBP19.19■□□□□ 0.66
UPK3A-202ENST00000396082 SSTR3P32745 418 aaPredicted RBP19.19■□□□□ 0.66
UPK3A-202ENST00000396082 DDIT3P35638 169 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 MATR3P43243 847 aaKnown RBP eCLIP19.19■□□□□ 0.66
UPK3A-202ENST00000396082 OSTNP61366 133 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 TUSC3Q13454 348 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 MPZL3Q6UWV2 235 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 VN1R2Q8NFZ6 395 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 CASP10Q92851 521 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 MSLNLQ96KJ4 702 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 VN1R3Q9BXE9 311 aa19.19■□□□□ 0.66
UPK3A-202ENST00000396082 MORC2Q9Y6X9 1032 aaPredicted RBP19.19■□□□□ 0.66
UPK3A-202ENST00000396082 CASTOR2A6NHX0 329 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 SOD2P04179 222 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 STAT6P42226 847 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 NCKAP1LP55160 1127 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 COASYQ13057 564 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 PTPN14Q15678 1187 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 KIAA1841Q6NSI8 718 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 CCDC73Q6ZRK6 1079 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 HAUS6Q7Z4H7 955 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 FAM178BQ8IXR5 827 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 CEP120Q8N960 986 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 LINC00301Q8NCQ3 95 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 HERC2P3Q9BVR0 1158 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 EMILIN2Q9BXX0 1053 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 MRPL17Q9NRX2 175 aaKnown RBP19.18■□□□□ 0.66
UPK3A-202ENST00000396082 TOPORSQ9NS56 1045 aaPredicted RBP19.18■□□□□ 0.66
UPK3A-202ENST00000396082 HCFC2Q9Y5Z7 792 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 IRAK3Q9Y616 596 aa19.18■□□□□ 0.66
UPK3A-202ENST00000396082 TTC28Q96AY4 2481 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 XIRP2A4UGR9 3374 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 VCANP13611 3396 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 C2CD2LO14523 706 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 PTGESO14684 152 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 TRAK2O60296 914 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 CLASP2O75122 1294 aaKnown RBP19.17■□□□□ 0.66
UPK3A-202ENST00000396082 TOM1L1O75674 476 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 YEATS4O95619 227 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 MCF2P10911 925 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 GRM5P41594 1212 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 SMAD2Q15796 467 aaKnown RBP19.17■□□□□ 0.66
UPK3A-202ENST00000396082 GLRA4Q5JXX5 417 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 SV2BQ7L1I2 683 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 SMRP1Q8NCR6 262 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 RABGGTAQ92696 567 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 PTPRHQ9HD43 1115 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 CACNG4Q9UBN1 327 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 SSX2IPQ9Y2D8 614 aa19.17■□□□□ 0.66
UPK3A-202ENST00000396082 TRIP11Q15643 1979 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 SPDYE4A6NLX3 237 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 F8W810 466 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 PPP6R2O75170 966 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 TADA2AO75478 443 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 SCP2P22307 547 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 GLUD2P49448 558 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 LIG4P49917 911 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 ZNF131P52739 623 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 HSP90AA2PQ14568 343 aaPredicted RBP19.16■□□□□ 0.66
UPK3A-202ENST00000396082 NOLC1Q14978 699 aaKnown RBP eCLIP19.16■□□□□ 0.66
UPK3A-202ENST00000396082 ANKRD54Q6NXT1 300 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 FUT10Q6P4F1 479 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 ZPBP2Q6X784 338 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 TMEM184AQ6ZMB5 413 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 DYMQ7RTS9 669 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 GJD3Q8N144 294 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 ACAP3Q96P50 834 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 APOL5Q9BWW9 433 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 PANK2Q9BZ23 570 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 PRKAG3Q9UGI9 489 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 ADAM28Q9UKQ2 775 aa19.16■□□□□ 0.66
UPK3A-202ENST00000396082 SPTBN5Q9NRC6 3674 aaKnown RBP19.15■□□□□ 0.66
UPK3A-202ENST00000396082 CITO14578 2027 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 HNRNPDLO14979 420 aaKnown RBP19.15■□□□□ 0.66
UPK3A-202ENST00000396082 CLDN3O15551 220 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 PROZP22891 400 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 KLRC2P26717 231 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 PKP1Q13835 747 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 KCNC3Q14003 757 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 PPFIBP1Q86W92 1011 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 PDILTQ8N807 584 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 HASPINQ8TF76 798 aa19.15■□□□□ 0.66
UPK3A-202ENST00000396082 ZBTB45Q96K62 511 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms