RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 NOMO1Q15155 1222 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 PRR31Q5SQ13 230 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 XP32Q5T750 250 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 CHST15Q7LFX5 561 aaPredicted RBP7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 OVCH2Q7RTZ1 564 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 FAM129CQ86XR2 697 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 DENND1CQ8IV53 801 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 CAMKK1Q8N5S9 505 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 DDX17Q92841 729 aaKnown RBP7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 KCNN1Q92952 543 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 HDAC10Q969S8 669 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 TTC17Q96AE7 1141 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 PTPN22Q9Y2R2 807 aa7.08□□□□□ -1.28
RNU4-39P-201ENST00000362455 H3BML4 177 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 KLHL18O94889 574 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 FSBPO95073 299 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 ZNF28P17035 718 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 CTSSP25774 331 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 POLD1P28340 1107 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 IL13P35225 146 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 USP14P54578 494 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 TOP3AQ13472 1001 aaPredicted RBP7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 MAN2A1Q16706 1144 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 COBLL1Q53SF7 1204 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 ZNF772Q68DY9 489 aaPredicted RBP7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 MIGA2Q7L4E1 593 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 GPR156Q8NFN8 814 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 PJA1Q8NG27 643 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 FNIP1Q8TF40 1166 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 KAT5Q92993 513 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 SIGLEC10Q96LC7 697 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 DDX21Q9NR30 783 aaKnown RBP eCLIP7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 SPATA6Q9NWH7 488 aaPredicted RBP7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 FAM50BQ9Y247 325 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 NCOA3Q9Y6Q9 1424 aa7.07□□□□□ -1.28
RNU4-39P-201ENST00000362455 ADGRB3O60242 1522 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 COL16A1Q07092 1604 aaPredicted RBP7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 AKR1B10O60218 316 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 UBXN7O94888 489 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 HMGCRP04035 888 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 ALDH2P05091 517 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 LTA4HP09960 611 aaKnown RBP7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 GAAP10253 952 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 MEF2AQ02078 507 aaPredicted RBP7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 BIRC2Q13490 618 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 SEPT2Q15019 361 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 LLGL1Q15334 1064 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 ABHD15Q6UXT9 468 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 IFNL2Q8IZJ0 200 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 PIK3C3Q8NEB9 887 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 NUDT10Q8NFP7 164 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 NUDT11Q96G61 164 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 SLC39A13Q96H72 371 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 RPS6KC1Q96S38 1066 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 FAM204AQ9H8W3 233 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 PCDHA13Q9Y5I0 950 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 IRAK3Q9Y616 596 aa7.06□□□□□ -1.28
RNU4-39P-201ENST00000362455 ADGRL2O95490 1459 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 RPTORQ8N122 1335 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 ANKRD50Q9ULJ7 1429 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 FAM171A2A8MVW0 826 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 ETV2O00321 342 aaPredicted RBP7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 APAF1O14727 1248 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 TPP1O14773 563 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 PRAMEF4O60810 478 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 TUSC2O75896 110 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 NBPF7P0C2Y1 421 aaPredicted RBP7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 RHCEP18577 417 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 RPL13P26373 211 aaKnown RBP7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 ETV4P43268 484 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 RHDQ02161 417 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 MEX3CQ5U5Q3 659 aaKnown RBP7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 FAM180AQ6UWF9 173 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 SRGAP1Q7Z6B7 1085 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 UNC5BQ8IZJ1 945 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 SVIPQ8NHG7 77 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 HOXB13Q92826 284 aaPredicted RBP7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 C7orf25Q9BPX7 421 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 POLR3GLQ9BT43 218 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 ZNF700Q9H0M5 742 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 L2HGDHQ9H9P8 463 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 USP25Q9UHP3 1055 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 CFAP20Q9Y6A4 193 aaKnown RBP7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 PTPN23Q9H3S7 1636 aa7.05□□□□□ -1.28
RNU4-39P-201ENST00000362455 AFF2P51816 1311 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 DDX3XO00571 662 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 TPD52L2O43399 206 aaKnown RBP7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 B3GALT2O43825 422 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 ZBED1O96006 694 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 ADSLP30566 484 aaPredicted RBP7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 DSC2Q02487 901 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 DLX2Q07687 328 aaPredicted RBP7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 UBE3CQ15386 1083 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 SAFBQ15424 915 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 TRIM68Q6AZZ1 485 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 IL31Q6EBC2 164 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 LARP4Q71RC2 724 aaKnown RBP eCLIP7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 RTKN2Q8IZC4 609 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 FAM43AQ8N2R8 423 aa7.04□□□□□ -1.28
RNU4-39P-201ENST00000362455 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms