RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 PADI6Q6TGC4 694 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 SLC5A4Q9NY91 659 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 KCNQ2O43526 872 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 EPHB2P29323 1055 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 DNAJC3Q13217 504 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 KCTD2Q14681 263 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 KAZALD1Q96I82 304 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 PHACTR1Q9C0D0 580 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 SMYD3Q9H7B4 428 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 PIDD1Q9HB75 910 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 PLAGL2Q9UPG8 496 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 SCINQ9Y6U3 715 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 CPS1P31327 1500 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 F8VZ95 297 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 AKR1B1P15121 316 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 SP100P23497 879 aaPredicted RBP17.04■□□□□ 0.32
NPHP3-201ENST00000337331 AP2B1P63010 937 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 THOC5Q13769 683 aaKnown RBP17.04■□□□□ 0.32
NPHP3-201ENST00000337331 TFDP1Q14186 410 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 KLHDC7AQ5VTJ3 777 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 BARGINQ6ZT62 677 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 FAM228AQ86W67 206 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 ADGRF4Q8IZF3 695 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 PDIK1LQ8N165 341 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.04■□□□□ 0.32
NPHP3-201ENST00000337331 DCAF4Q8WV16 495 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 ADAM22Q9P0K1 906 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 ARHGAP20Q9P2F6 1191 aa17.04■□□□□ 0.32
NPHP3-201ENST00000337331 OVOS2A0A0J9YW53 1432 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 OVOS2Q6IE36 1432 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 DCDC2CA8MYV0 355 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 SNX3O60493 162 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 TRIM49P0CI25 452 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 TRIM49CP0CI26 452 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ATP6V1B1P15313 513 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 GPC5P78333 572 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 RGS9BPQ6ZS82 235 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 TUBB6Q9BUF5 446 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ASNSP08243 561 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 NPR1P16066 1061 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 PCYT1AP49585 367 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 PSMD7P51665 324 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ORC2Q13416 577 aaPredicted RBP17.03■□□□□ 0.32
NPHP3-201ENST00000337331 NAALADL2Q58DX5 795 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 SCARA5Q6ZMJ2 495 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 CCNYQ8ND76 341 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ZNF341Q9BYN7 854 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 UBN1Q9NPG3 1134 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 MYO3AQ8NEV4 1616 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ARHGAP10A1A4S6 786 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 MMEL1Q495T6 779 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ANKS1AQ92625 1134 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 SH3BP5O60239 455 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 LINGO3P0C6S8 592 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ACTN1P12814 892 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 MKRN3Q13064 507 aaKnown RBP17.03■□□□□ 0.32
NPHP3-201ENST00000337331 NKX1-1Q15270 411 aaPredicted RBP17.03■□□□□ 0.32
NPHP3-201ENST00000337331 KCTD21Q4G0X4 260 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 DARS2Q6PI48 645 aaKnown RBP17.03■□□□□ 0.32
NPHP3-201ENST00000337331 SMIM5Q71RC9 77 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 EDEM3Q9BZQ6 932 aa17.03■□□□□ 0.32
NPHP3-201ENST00000337331 PABPC3Q9H361 631 aaKnown RBP17.03■□□□□ 0.32
NPHP3-201ENST00000337331 ADARP55265 1226 aaKnown RBP17.02■□□□□ 0.32
NPHP3-201ENST00000337331 PDXDC1Q6P996 788 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 PYROXD1Q8WU10 500 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 ARHGEF1Q92888 912 aaKnown RBP17.02■□□□□ 0.32
NPHP3-201ENST00000337331 RICTORQ6R327 1708 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 SRGAP2CP0DJJ0 459 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 EPHB1P54762 984 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 MDM2Q00987 491 aaPredicted RBP17.02■□□□□ 0.32
NPHP3-201ENST00000337331 KIAA1755Q5JYT7 1200 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 WDR59Q6PJI9 974 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 SULF1Q8IWU6 871 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 MAML1Q92585 1016 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 PREBQ9HCU5 417 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 SMYD2Q9NRG4 433 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 CYP39A1Q9NYL5 469 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 AKT3Q9Y243 479 aa17.02■□□□□ 0.32
NPHP3-201ENST00000337331 PIK3C2BO00750 1634 aa17.02■□□□□ 0.31
NPHP3-201ENST00000337331 PDS5AQ29RF7 1337 aaKnown RBP17.02■□□□□ 0.31
NPHP3-201ENST00000337331 TLR3O15455 904 aaKnown RBP17.02■□□□□ 0.31
NPHP3-201ENST00000337331 CCDC22O60826 627 aa17.02■□□□□ 0.31
NPHP3-201ENST00000337331 MX2P20592 715 aa17.02■□□□□ 0.31
NPHP3-201ENST00000337331 BAG6P46379 1132 aa17.02■□□□□ 0.31
NPHP3-201ENST00000337331 TOB1P50616 345 aaPredicted RBP17.02■□□□□ 0.31
NPHP3-201ENST00000337331 ZNF268Q14587 947 aaPredicted RBP17.02■□□□□ 0.31
NPHP3-201ENST00000337331 OR6B2Q6IFH4 312 aa17.02■□□□□ 0.31
NPHP3-201ENST00000337331 PPP1R2P3Q6NXS1 205 aa17.02■□□□□ 0.31
NPHP3-201ENST00000337331 ELOA2Q8IYF1 753 aaPredicted RBP17.02■□□□□ 0.31
NPHP3-201ENST00000337331 NR1H4Q96RI1 486 aaPredicted RBP17.02■□□□□ 0.31
NPHP3-201ENST00000337331 FTLP02792 175 aaPredicted RBP17.01■□□□□ 0.31
NPHP3-201ENST00000337331 PRELPP51888 382 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 PHEXP78562 749 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 C6orf89Q6UWU4 347 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 KCTD6Q8NC69 237 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 TRAPPC9Q96Q05 1148 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 MSTO1Q9BUK6 570 aa17.01■□□□□ 0.31
NPHP3-201ENST00000337331 NPHS2Q9NP85 383 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms