RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 DDX53Q86TM3 631 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 VPS52Q8N1B4 723 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 RABGGTAQ92696 567 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 PPP2R3CQ969Q6 453 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 PABPC5Q96DU9 382 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 CCDC94Q9BW85 323 aaPredicted RBP19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 VN1R3Q9BXE9 311 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 TLE6Q9H808 572 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 NGRNQ9NPE2 291 aaKnown RBP19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 CLDND1Q9NY35 253 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 FAM13BQ9NYF5 915 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 TBC1D7Q9P0N9 293 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 CACNG4Q9UBN1 327 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 ZMYM2Q9UBW7 1377 aa19.68■□□□□ 0.74
SNRPA1-201ENST00000254193 RALGAPA2Q2PPJ7 1873 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 HIDE1A8MVS5 230 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 LINC01565O15544 149 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 GAP43P17677 238 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 SCP2P22307 547 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 KCNQ1P51787 676 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 GTF2BQ00403 316 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 COL19A1Q14993 1142 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 ZNF720Q7Z2F6 126 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 AUTS2Q8WXX7 1259 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 HAPLN2Q9GZV7 340 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 CUEDC2Q9H467 287 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 KBTBD4Q9NVX7 518 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 MARCH5Q9NX47 278 aa19.67■□□□□ 0.74
SNRPA1-201ENST00000254193 H3BQ06 376 aaPredicted RBP19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 HNRNPDLO14979 420 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 CLDN3O15551 220 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 NCK2O43639 380 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 NR1I2O75469 434 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 THP07101 528 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 MATR3P43243 847 aaKnown RBP eCLIP19.66■□□□□ 0.741e-7■■□□□ 11.4
SNRPA1-201ENST00000254193 LIG4P49917 911 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 MCL1Q07820 350 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 NOLC1Q14978 699 aaKnown RBP eCLIP19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 AAK1Q2M2I8 961 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 CTC1Q2NKJ3 1217 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 SEZ6Q53EL9 994 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 HERC4Q5GLZ8 1057 aaPredicted RBP19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 GLRA4Q5JXX5 417 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 MRPL43Q8N983 215 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 TNMDQ9H2S6 317 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 MRPL44Q9H9J2 332 aaKnown RBP19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 PANK4Q9NVE7 773 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 KCNH3Q9ULD8 1083 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 PRUNE2Q8WUY3 3088 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 MYO7AQ13402 2215 aa19.66■□□□□ 0.74
SNRPA1-201ENST00000254193 NLRC5Q86WI3 1866 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 FRMD3A2A2Y4 597 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 CASTOR2A6NHX0 329 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 CXCL14O95715 111 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 CA8P35219 290 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 LTBRP36941 435 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 YARSP54577 528 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 RBM10P98175 930 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 DLX2Q07687 328 aaPredicted RBP19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 ADAM15Q13444 863 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 TUSC3Q13454 348 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 SMC1AQ14683 1233 aaKnown RBP19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 NAB2Q15742 525 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 TPRNQ4KMQ1 711 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 TJAP1Q5JTD0 557 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 MAP4K3Q8IVH8 894 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 ACAP3Q96P50 834 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 PAAF1Q9BRP4 392 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 COLEC11Q9BWP8 271 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 LRRC27Q9C0I9 530 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 ZBP1Q9H171 429 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 IKZF4Q9H2S9 585 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 ST6GALNAC4Q9H4F1 302 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 SEL1LQ9UBV2 794 aa19.65■□□□□ 0.74
SNRPA1-201ENST00000254193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 C2orf71A6NGG8 1288 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 MEFVO15553 781 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 PIGRP01833 764 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 CMA1P23946 247 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 NUCB2P80303 420 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 AMPD3Q01432 767 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 ADALQ6DHV7 355 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 SLC39A4Q6P5W5 647 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 TAS1R1Q7RTX1 841 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 EFHBQ8N7U6 833 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 FGFBP2Q9BYJ0 223 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 TRIM9Q9C026 710 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 SCAND2PQ9GZW5 306 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 GDPD2Q9HCC8 539 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 TOPORSQ9NS56 1045 aaPredicted RBP19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 KIAA1671Q9BY89 1806 aa19.64■□□□□ 0.73
SNRPA1-201ENST00000254193 SMIM28A0A1B0GU29 152 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 A0A1B0GVL5 298 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 TISP43B9A030 160 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 ANKRD63C9JTQ0 380 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 PPP1R37O75864 691 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 CTSAP10619 480 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 BMP1P13497 986 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 CASP1P29466 404 aa19.63■□□□□ 0.73
SNRPA1-201ENST00000254193 ABCD1P33897 745 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms