RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 STE3P06783 470 aa-0.02□□□□□ -2.41
snR56snR56 CPA1P07258 411 aaKnown RBP-0.02□□□□□ -2.41
snR56snR56 UPS2P35200 230 aa-0.02□□□□□ -2.41
snR56snR56 DOG1P38774 246 aa-0.02□□□□□ -2.41
snR56snR56 SWC4P53201 476 aa-0.02□□□□□ -2.41
snR56snR56 AVT2P39981 480 aa-0.03□□□□□ -2.41
snR56snR56 PRM10P42946 383 aa-0.03□□□□□ -2.41
snR56snR56 MDM34P53083 459 aa-0.03□□□□□ -2.41
snR56snR56 YGR168CP53293 376 aa-0.03□□□□□ -2.41
snR56snR56 AIM36Q03798 255 aa-0.03□□□□□ -2.41
snR56snR56 YLR162WQ06235 118 aa-0.03□□□□□ -2.41
snR56snR56 TAZ1Q06510 381 aa-0.03□□□□□ -2.41
snR56snR56 VMA8P32610 256 aaKnown RBP-0.04□□□□□ -2.42
snR56snR56 RPL13BP40212 199 aaKnown RBP-0.04□□□□□ -2.42
snR56snR56 INA22P40576 216 aa-0.04□□□□□ -2.42
snR56snR56 KEL2P50090 882 aa-0.04□□□□□ -2.42
snR56snR56 OKP1P53298 406 aa-0.04□□□□□ -2.42
snR56snR56 YNL146WP53906 100 aa-0.04□□□□□ -2.42
snR56snR56 CYT2Q00873 224 aa-0.04□□□□□ -2.42
snR56snR56 MRPS8Q03799 155 aa-0.04□□□□□ -2.42
snR56snR56 RPL13AQ12690 199 aaPredicted RBP-0.04□□□□□ -2.42
snR56snR56 SIF2P38262 535 aa-0.05□□□□□ -2.42
snR56snR56 GDS1P41913 522 aa-0.05□□□□□ -2.42
snR56snR56 SUB1P54000 292 aaKnown RBP-0.05□□□□□ -2.42
snR56snR56 YML018CQ03730 393 aa-0.05□□□□□ -2.42
snR56snR56 RAD3P06839 778 aa-0.06□□□□□ -2.42
snR56snR56 SXM1Q04175 944 aaKnown RBP-0.06□□□□□ -2.42
snR56snR56 CTR3Q06686 241 aa-0.06□□□□□ -2.42
snR56snR56 DDI2P0CH63 225 aa-0.07□□□□□ -2.42
snR56snR56 DDI3P0CH64 225 aa-0.07□□□□□ -2.42
snR56snR56 RNP1P32385 249 aa-0.07□□□□□ -2.42
snR56snR56 HMT1P38074 348 aa-0.07□□□□□ -2.42
snR56snR56 YHR022CP38763 256 aa-0.07□□□□□ -2.42
snR56snR56 FMP41P53889 259 aaKnown RBP-0.07□□□□□ -2.42
snR56snR56 RSM10Q03201 203 aa-0.07□□□□□ -2.42
snR56snR56 YOR114WQ12219 294 aa-0.07□□□□□ -2.42
snR56snR56 RPL31AP0C2H8 113 aaKnown RBP-0.08□□□□□ -2.42
snR56snR56 ADH5P38113 351 aaKnown RBP-0.08□□□□□ -2.42
snR56snR56 LRP1P38801 184 aaKnown RBP-0.08□□□□□ -2.42
snR56snR56 TEM1P38987 245 aa-0.08□□□□□ -2.42
snR56snR56 ERG25P53045 309 aa-0.08□□□□□ -2.42
snR56snR56 NIF3P53081 288 aa-0.08□□□□□ -2.42
snR56snR56 PEX10Q05568 337 aa-0.08□□□□□ -2.42
snR56snR56 IZH4Q99393 312 aa-0.08□□□□□ -2.42
snR56snR56 CYR1P08678 2026 aaKnown RBP-0.08□□□□□ -2.42
snR56snR56 YKL162CP36052 402 aa-0.09□□□□□ -2.42
snR56snR56 SEC28P40509 296 aaKnown RBP-0.09□□□□□ -2.42
snR56snR56 BUD25P85052 153 aa-0.09□□□□□ -2.42
snR56snR56 DPP1Q05521 289 aa-0.09□□□□□ -2.42
snR56snR56 MEU1Q07938 337 aaKnown RBP RIP-Chip data-0.09□□□□□ -2.42not detected
snR56snR56 RRP42Q12277 265 aaPredicted RBP-0.09□□□□□ -2.42
snR56snR56 YPR064WQ12492 139 aa-0.09□□□□□ -2.42
snR56snR56 RPS3P05750 240 aaKnown RBP-0.1□□□□□ -2.43
snR56snR56 COS2P0CX12 379 aa-0.1□□□□□ -2.43
snR56snR56 COS3P0CX13 379 aa-0.1□□□□□ -2.43
snR56snR56 SMD3P43321 101 aaKnown RBP-0.1□□□□□ -2.43
snR56snR56 MPP10P47083 593 aaKnown RBP-0.1□□□□□ -2.43
snR56snR56 YPR1Q12458 312 aa-0.1□□□□□ -2.43
snR56snR56 DAD2P36162 133 aa-0.11□□□□□ -2.43
snR56snR56 PHO88P38264 188 aaPredicted RBP-0.11□□□□□ -2.43
snR56snR56 YJL028WP47062 111 aa-0.11□□□□□ -2.43
snR56snR56 LOA1Q06508 300 aa-0.11□□□□□ -2.43
snR56snR56 NBL1Q3E7Y6 73 aa-0.11□□□□□ -2.43
snR56snR56 RPL18AP0CX49 186 aaKnown RBP-0.12□□□□□ -2.43
snR56snR56 RPL18BP0CX50 186 aaKnown RBP-0.12□□□□□ -2.43
snR56snR56 SUA5P32579 426 aa-0.12□□□□□ -2.43
snR56snR56 AGX1P43567 385 aa-0.12□□□□□ -2.43
snR56snR56 OST2P46964 130 aa-0.13□□□□□ -2.43
snR56snR56 PBP4Q07362 185 aaKnown RBP-0.13□□□□□ -2.43
snR56snR56 RPS0AP32905 252 aaKnown RBP-0.14□□□□□ -2.43
snR56snR56 SDC1Q03323 175 aa-0.14□□□□□ -2.43
snR56snR56 ATO3Q12359 275 aa-0.14□□□□□ -2.43
snR56snR56 SKS1Q12505 502 aa-0.14□□□□□ -2.43
snR56snR56 FKS1P38631 1876 aaKnown RBP-0.14□□□□□ -2.43
snR56snR56 MDH3P32419 343 aaKnown RBP RIP-Chip data-0.15□□□□□ -2.43not detected
snR56snR56 MAL32P38158 584 aa-0.15□□□□□ -2.43
snR56snR56 RXT2P38255 430 aa-0.15□□□□□ -2.43
snR56snR56 MAL12P53341 584 aa-0.15□□□□□ -2.43
snR56snR56 YNR062CP53748 327 aa-0.15□□□□□ -2.43
snR56snR56 PST1Q12355 444 aa-0.15□□□□□ -2.43
snR56snR56 PRP8P33334 2413 aaKnown RBP-0.15□□□□□ -2.43
snR56snR56 VPS60Q03390 229 aa-0.16□□□□□ -2.44
snR56snR56 BOP2Q06150 570 aa-0.16□□□□□ -2.44
snR56snR56 SAM4Q08985 325 aaKnown RBP-0.16□□□□□ -2.44
snR56snR56 APC9Q12107 265 aa-0.16□□□□□ -2.44
snR56snR56 YMR316C-AI2HB70 103 aa-0.17□□□□□ -2.44
snR56snR56 PET494P07390 489 aaPredicted RBP-0.17□□□□□ -2.44
snR56snR56 GPA2P10823 449 aa-0.17□□□□□ -2.44
snR56snR56 SWI3P32591 825 aa-0.17□□□□□ -2.44
snR56snR56 YMR209CQ03648 457 aa-0.17□□□□□ -2.44
snR56snR56 YJR079WP47126 109 aa-0.18□□□□□ -2.44
snR56snR56 MPA43P53583 542 aaPredicted RBP-0.18□□□□□ -2.44
snR56snR56 ASI3P53983 676 aa-0.18□□□□□ -2.44
snR56snR56 CAM1P29547 415 aaKnown RBP-0.19□□□□□ -2.44
snR56snR56 SPT4P32914 102 aaPredicted RBP-0.19□□□□□ -2.44
snR56snR56 ECM13P38195 257 aa-0.19□□□□□ -2.44
snR56snR56 RCY1P39531 840 aa-0.19□□□□□ -2.44
snR56snR56 TAF9Q05027 157 aa-0.19□□□□□ -2.44
snR56snR56 YHR032W-AP0C5N6 59 aa-0.2□□□□□ -2.44
snR56snR56 EMI1Q04406 187 aa-0.2□□□□□ -2.44
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms