RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 EXO70P19658 623 aa2.14□□□□□ -2.07
snR43snR43 YCR100CP25606 316 aa2.14□□□□□ -2.07
snR43snR43 CSM1P25651 190 aa2.14□□□□□ -2.07
snR43snR43 RPC19P28000 142 aaKnown RBP2.14□□□□□ -2.07
snR43snR43 SAC1P32368 623 aaKnown RBP2.14□□□□□ -2.07
snR43snR43 PAD1P33751 242 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
snR43snR43 YNK1P36010 153 aaKnown RBP2.14□□□□□ -2.07
snR43snR43 CUE2P36075 443 aaKnown RBP2.14□□□□□ -2.07
snR43snR43 GPI18P38211 433 aa2.14□□□□□ -2.07
snR43snR43 MTW1P39731 289 aa2.14□□□□□ -2.07
snR43snR43 YER184CP39961 794 aa2.14□□□□□ -2.07
snR43snR43 SGN1P40561 250 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
snR43snR43 TDA10P42938 290 aa2.14□□□□□ -2.07
snR43snR43 GCN20P43535 752 aaKnown RBP2.14□□□□□ -2.07
snR43snR43 YGL117WP53133 265 aa2.14□□□□□ -2.07
snR43snR43 GEP7P53171 287 aa2.14□□□□□ -2.07
snR43snR43 COG2P53271 262 aa2.14□□□□□ -2.07
snR43snR43 SYF2P53277 215 aaPredicted RBP2.14□□□□□ -2.07
snR43snR43 MEP3P53390 489 aa2.14□□□□□ -2.07
snR43snR43 SMM1P53720 384 aaKnown RBP2.14□□□□□ -2.07
snR43snR43 YNR062CP53748 327 aa2.14□□□□□ -2.07
snR43snR43 HLR1Q04429 423 aa2.14□□□□□ -2.07
snR43snR43 RNH202Q05635 350 aa2.14□□□□□ -2.07
snR43snR43 SNT309Q06091 175 aaPredicted RBP2.14□□□□□ -2.07
snR43snR43 CTS2Q06350 511 aa2.14□□□□□ -2.07
snR43snR43 SSK1Q07084 712 aa2.14□□□□□ -2.07
snR43snR43 OSW1Q08692 278 aa2.14□□□□□ -2.07
snR43snR43 RRS1Q08746 203 aaKnown RBP2.14□□□□□ -2.07
snR43snR43 RAX2Q12465 1220 aa2.14□□□□□ -2.07
snR43snR43 YOL087CQ99247 1116 aa2.14□□□□□ -2.07
snR43snR43 YPT6Q99260 215 aa2.14□□□□□ -2.07
snR43snR43 AQY1P0CD91 305 aa2.13□□□□□ -2.07
snR43snR43 RPS8AP0CX39 200 aaKnown RBP2.13□□□□□ -2.07
snR43snR43 RPS8BP0CX40 200 aaKnown RBP2.13□□□□□ -2.07
snR43snR43 YER190C-BP0CX94 160 aa2.13□□□□□ -2.07
snR43snR43 YEL077W-AP0CX95 160 aa2.13□□□□□ -2.07
snR43snR43 YGR296C-BP0CX96 160 aa2.13□□□□□ -2.07
snR43snR43 YPL283W-BP0CX97 160 aa2.13□□□□□ -2.07
snR43snR43 YPR204C-AP0CX98 160 aa2.13□□□□□ -2.07
snR43snR43 YFL068WP0CX99 160 aa2.13□□□□□ -2.07
snR43snR43 YLL066W-AP0CY00 160 aa2.13□□□□□ -2.07
snR43snR43 YLL067W-AP0CY01 160 aa2.13□□□□□ -2.07
snR43snR43 DPM1P14020 267 aaKnown RBP2.13□□□□□ -2.07
snR43snR43 YAK1P14680 807 aa2.13□□□□□ -2.07
snR43snR43 PPA2P28239 310 aa2.13□□□□□ -2.07
snR43snR43 GLC7P32598 312 aaKnown RBP2.13□□□□□ -2.07
snR43snR43 CLG1P35190 452 aa2.13□□□□□ -2.07
snR43snR43 YPT10P38146 199 aa2.13□□□□□ -2.07
snR43snR43 ECM8P38246 354 aa2.13□□□□□ -2.07
snR43snR43 YHR035WP38769 630 aa2.13□□□□□ -2.07
snR43snR43 MLH1P38920 769 aa2.13□□□□□ -2.07
snR43snR43 MPM1P40364 252 aa2.13□□□□□ -2.07
snR43snR43 YFL015CP43578 164 aa2.13□□□□□ -2.07
snR43snR43 BRR6P53062 197 aa2.13□□□□□ -2.07
snR43snR43 YPL077CQ02831 240 aa2.13□□□□□ -2.07
snR43snR43 YPL108WQ02872 168 aaPredicted RBP2.13□□□□□ -2.07
snR43snR43 PRP3Q03338 469 aaPredicted RBP2.13□□□□□ -2.07
snR43snR43 HSP31Q04432 237 aa2.13□□□□□ -2.07
snR43snR43 PRP11Q07350 266 aaPredicted RBP2.13□□□□□ -2.07
snR43snR43 THP1Q08231 455 aa2.13□□□□□ -2.07
snR43snR43 MCH4Q08268 501 aa2.13□□□□□ -2.07
snR43snR43 HRT1Q08273 121 aa2.13□□□□□ -2.07
snR43snR43 UIP4Q08926 304 aa2.13□□□□□ -2.07
snR43snR43 MCT1Q12283 360 aa2.13□□□□□ -2.07
snR43snR43 YOL114CQ12322 202 aa2.13□□□□□ -2.07
snR43snR43 MRX4Q12467 430 aa2.13□□□□□ -2.07
snR43snR43 TMA7Q3E764 64 aaKnown RBP2.13□□□□□ -2.07
snR43snR43 YGR035W-AQ45U48 73 aa2.13□□□□□ -2.07
snR43snR43 THP2O13539 261 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 RPN13O13563 156 aa2.12□□□□□ -2.07
snR43snR43 TIM9O74700 87 aa2.12□□□□□ -2.07
snR43snR43 RPL39P04650 51 aa2.12□□□□□ -2.07
snR43snR43 PDE2P06776 526 aa2.12□□□□□ -2.07
snR43snR43 RAD7P06779 565 aa2.12□□□□□ -2.07
snR43snR43 YOL162WP0CF19 215 aa2.12□□□□□ -2.07
snR43snR43 ELO2P25358 347 aa2.12□□□□□ -2.07
snR43snR43 RHB1P25378 209 aa2.12□□□□□ -2.07
snR43snR43 IDH1P28834 360 aaKnown RBP RIP-Chip data2.12□□□□□ -2.07not detected
snR43snR43 VPH2P32341 215 aa2.12□□□□□ -2.07
snR43snR43 ASF2P32448 525 aaPredicted RBP2.12□□□□□ -2.07
snR43snR43 RPN2P32565 945 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 TOA1P32773 286 aa2.12□□□□□ -2.07
snR43snR43 MRE11P32829 692 aa2.12□□□□□ -2.07
snR43snR43 YME2P32843 850 aa2.12□□□□□ -2.07
snR43snR43 SRO77P38163 1010 aa2.12□□□□□ -2.07
snR43snR43 FIG1P38224 298 aa2.12□□□□□ -2.07
snR43snR43 CTR2P38865 189 aa2.12□□□□□ -2.07
snR43snR43 PAC2P39937 518 aa2.12□□□□□ -2.07
snR43snR43 AGE2P40529 298 aa2.12□□□□□ -2.07
snR43snR43 NAS2P40555 220 aa2.12□□□□□ -2.07
snR43snR43 PFS2P42841 465 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 IRC7P43623 340 aa2.12□□□□□ -2.07
snR43snR43 IDS2P46958 469 aa2.12□□□□□ -2.07
snR43snR43 MDE1P47095 244 aa2.12□□□□□ -2.07
snR43snR43 BAT2P47176 376 aaKnown RBP2.12□□□□□ -2.07
snR43snR43 IMO32P53219 342 aa2.12□□□□□ -2.07
snR43snR43 CPR8P53728 308 aa2.12□□□□□ -2.07
snR43snR43 YNR064CP53750 290 aa2.12□□□□□ -2.07
snR43snR43 YNL181WP53878 407 aa2.12□□□□□ -2.07
snR43snR43 APJ1P53940 528 aa2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 25 ms