RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C SNF2P22082 1703 aa2.38□□□□□ -2.03
RPC40YPR110C ZIP1P31111 875 aa2.38□□□□□ -2.03
RPC40YPR110C YBR062CP38239 180 aa2.38□□□□□ -2.03
RPC40YPR110C TDA11P38854 504 aa2.38□□□□□ -2.03
RPC40YPR110C LIF1P53150 421 aa2.38□□□□□ -2.03
RPC40YPR110C ACT1P60010 375 aaKnown RBP2.38□□□□□ -2.03
RPC40YPR110C YMR244WQ04018 355 aa2.38□□□□□ -2.03
RPC40YPR110C KAP95Q06142 861 aaKnown RBP2.38□□□□□ -2.03
RPC40YPR110C PEX30Q06169 523 aa2.38□□□□□ -2.03
RPC40YPR110C TAZ1Q06510 381 aa2.38□□□□□ -2.03
RPC40YPR110C URB1P34241 1764 aaKnown RBP2.38□□□□□ -2.03
RPC40YPR110C ADE6P38972 1358 aaKnown RBP2.37□□□□□ -2.03
RPC40YPR110C FAB1P34756 2278 aa2.37□□□□□ -2.03
RPC40YPR110C DAL81P21657 970 aa2.37□□□□□ -2.03
RPC40YPR110C RPB9P27999 122 aa2.37□□□□□ -2.03
RPC40YPR110C ICL1P28240 557 aaPredicted RBP2.37□□□□□ -2.03
RPC40YPR110C CDC13P32797 924 aaKnown RBP2.37□□□□□ -2.03
RPC40YPR110C AIM29P36154 155 aa2.37□□□□□ -2.03
RPC40YPR110C YIL054WP40524 105 aa2.37□□□□□ -2.03
RPC40YPR110C YFL064CP43540 174 aa2.37□□□□□ -2.03
RPC40YPR110C MRX5P47007 382 aa2.37□□□□□ -2.03
RPC40YPR110C EMC2P47133 292 aaKnown RBP2.37□□□□□ -2.03
RPC40YPR110C LAP3Q01532 483 aaKnown RBP RIP-Chip data2.37□□□□□ -2.03not detected
RPC40YPR110C SPP2Q02521 185 aa2.37□□□□□ -2.03
RPC40YPR110C RNY1Q02933 434 aaKnown RBP2.37□□□□□ -2.03
RPC40YPR110C GMC2Q06201 188 aa2.37□□□□□ -2.03
RPC40YPR110C TFC7Q12415 435 aa2.37□□□□□ -2.03
RPC40YPR110C APC1P53886 1748 aa2.37□□□□□ -2.03
RPC40YPR110C ILV1P00927 576 aaKnown RBP2.36□□□□□ -2.03
RPC40YPR110C RPL24AP04449 155 aaKnown RBP2.36□□□□□ -2.03
RPC40YPR110C YSR3P23501 404 aa2.36□□□□□ -2.03
RPC40YPR110C SUA5P32579 426 aa2.36□□□□□ -2.03
RPC40YPR110C SPT4P32914 102 aaPredicted RBP2.36□□□□□ -2.03
RPC40YPR110C MBA1P38300 278 aa2.36□□□□□ -2.03
RPC40YPR110C TRR2P38816 342 aa2.36□□□□□ -2.03
RPC40YPR110C ASP1P38986 381 aaPredicted RBP2.36□□□□□ -2.03
RPC40YPR110C RCY1P39531 840 aa2.36□□□□□ -2.03
RPC40YPR110C FRT2P39734 528 aa2.36□□□□□ -2.03
RPC40YPR110C KAP114P53067 1004 aa2.36□□□□□ -2.03
RPC40YPR110C TPN1P53099 579 aa2.36□□□□□ -2.03
RPC40YPR110C YML018CQ03730 393 aa2.36□□□□□ -2.03
RPC40YPR110C VBA1Q04301 562 aa2.36□□□□□ -2.03
RPC40YPR110C TAF9Q05027 157 aa2.36□□□□□ -2.03
RPC40YPR110C YDL012CQ12489 107 aa2.36□□□□□ -2.03
RPC40YPR110C MRPL6P32904 214 aa2.35□□□□□ -2.03
RPC40YPR110C MRPL37P36532 105 aa2.35□□□□□ -2.03
RPC40YPR110C NPT1P39683 429 aaKnown RBP2.35□□□□□ -2.03
RPC40YPR110C YER184CP39961 794 aa2.35□□□□□ -2.03
RPC40YPR110C SCC4P40090 624 aa2.35□□□□□ -2.03
RPC40YPR110C YIA6P40556 373 aa2.35□□□□□ -2.03
RPC40YPR110C YAR1P46683 200 aa2.35□□□□□ -2.03
RPC40YPR110C IBA57P47158 497 aa2.35□□□□□ -2.03
RPC40YPR110C YGL118CP53132 145 aa2.35□□□□□ -2.03
RPC40YPR110C HST4P53688 370 aa2.35□□□□□ -2.03
RPC40YPR110C YNL040WP53960 456 aaPredicted RBP2.35□□□□□ -2.03
RPC40YPR110C SMD1Q02260 146 aaPredicted RBP2.35□□□□□ -2.03
RPC40YPR110C TRM44Q02648 567 aaKnown RBP2.35□□□□□ -2.03
RPC40YPR110C CSI1Q04368 295 aa2.35□□□□□ -2.03
RPC40YPR110C MRX8Q05473 314 aa2.35□□□□□ -2.03
RPC40YPR110C DPP1Q05521 289 aa2.35□□□□□ -2.03
RPC40YPR110C YLL007CQ07799 665 aa2.35□□□□□ -2.03
RPC40YPR110C RLP24Q07915 199 aaKnown RBP2.35□□□□□ -2.03
RPC40YPR110C POM33Q12164 279 aa2.35□□□□□ -2.03
RPC40YPR110C YOR114WQ12219 294 aa2.35□□□□□ -2.03
RPC40YPR110C COX2P00410 251 aa2.34□□□□□ -2.03
RPC40YPR110C PET494P07390 489 aaPredicted RBP2.34□□□□□ -2.03
RPC40YPR110C RPS24AP0CX31 135 aaKnown RBP2.34□□□□□ -2.03
RPC40YPR110C RPS24BP0CX32 135 aaKnown RBP2.34□□□□□ -2.03
RPC40YPR110C CUP2P15315 225 aa2.34□□□□□ -2.03
RPC40YPR110C SKG6P32900 734 aaPredicted RBP2.34□□□□□ -2.03
RPC40YPR110C MRPL3P36516 390 aa2.34□□□□□ -2.03
RPC40YPR110C BDH1P39714 382 aa2.34□□□□□ -2.03
RPC40YPR110C EDC2P40023 145 aaPredicted RBP2.34□□□□□ -2.03
RPC40YPR110C CAX4P53223 239 aa2.34□□□□□ -2.03
RPC40YPR110C CPD1P53314 239 aa2.34□□□□□ -2.03
RPC40YPR110C YMR209CQ03648 457 aa2.34□□□□□ -2.03
RPC40YPR110C YAL063C-AQ3E791 96 aa2.34□□□□□ -2.03
RPC40YPR110C YRF1-3P0CX14 1859 aa2.33□□□□□ -2.04
RPC40YPR110C YRF1-7P0CX15 1859 aa2.33□□□□□ -2.04
RPC40YPR110C YRF1-6P53819 1859 aa2.33□□□□□ -2.04
RPC40YPR110C NOP1P15646 327 aaKnown RBP2.33□□□□□ -2.04
RPC40YPR110C CPT1P17898 393 aa2.33□□□□□ -2.04
RPC40YPR110C TPS2P31688 896 aaKnown RBP2.33□□□□□ -2.04
RPC40YPR110C CSE1P33307 960 aa2.33□□□□□ -2.04
RPC40YPR110C SLX1P38324 304 aa2.33□□□□□ -2.04
RPC40YPR110C YHL044WP38727 235 aa2.33□□□□□ -2.04
RPC40YPR110C PRM9P39551 298 aa2.33□□□□□ -2.04
RPC40YPR110C KRE29P40026 464 aa2.33□□□□□ -2.04
RPC40YPR110C CDC14Q00684 551 aa2.33□□□□□ -2.04
RPC40YPR110C ATC1Q04005 294 aa2.33□□□□□ -2.04
RPC40YPR110C ARC18Q05933 178 aaKnown RBP2.33□□□□□ -2.04
RPC40YPR110C YDL144CQ07589 356 aa2.33□□□□□ -2.04
RPC40YPR110C IES4Q08561 116 aa2.33□□□□□ -2.04
RPC40YPR110C YPL264CQ08980 353 aa2.33□□□□□ -2.04
RPC40YPR110C YDL211CQ12121 372 aa2.33□□□□□ -2.04
RPC40YPR110C FLO11P08640 1367 aa2.33□□□□□ -2.04
RPC40YPR110C RIM15P43565 1770 aa2.33□□□□□ -2.04
RPC40YPR110C POL30P15873 258 aaKnown RBP2.32□□□□□ -2.04
RPC40YPR110C MET16P18408 261 aaPredicted RBP2.32□□□□□ -2.04
RPC40YPR110C YCR025CP25352 136 aa2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms