RNA–Protein interactions for RNA: YOR319W

HSH49, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH49, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH49YOR319W GLG2P47011 380 aa3.05□□□□□ -1.92
HSH49YOR319W HSH155P49955 971 aaKnown RBP3.05□□□□□ -1.92
HSH49YOR319W YGL262WP53054 175 aa3.05□□□□□ -1.92
HSH49YOR319W VEL1P53058 206 aa3.05□□□□□ -1.92
HSH49YOR319W USE1P53146 245 aa3.05□□□□□ -1.92
HSH49YOR319W ASI3P53983 676 aa3.05□□□□□ -1.92
HSH49YOR319W INP1Q03694 420 aa3.05□□□□□ -1.92
HSH49YOR319W SPO77Q06134 477 aa3.05□□□□□ -1.92
HSH49YOR319W YOL029CQ08187 201 aa3.05□□□□□ -1.92
HSH49YOR319W YPL278CQ08990 100 aa3.05□□□□□ -1.92
HSH49YOR319W RAX2Q12465 1220 aa3.05□□□□□ -1.92
HSH49YOR319W SNF8Q12483 233 aa3.05□□□□□ -1.92
HSH49YOR319W YMR316C-AI2HB70 103 aa3.04□□□□□ -1.92
HSH49YOR319W RHO1P06780 209 aaKnown RBP3.04□□□□□ -1.92
HSH49YOR319W MRPL25P23369 157 aa3.04□□□□□ -1.92
HSH49YOR319W LDB16P25587 256 aa3.04□□□□□ -1.92
HSH49YOR319W IMP1P28627 190 aa3.04□□□□□ -1.92
HSH49YOR319W CAM1P29547 415 aaKnown RBP3.04□□□□□ -1.92
HSH49YOR319W RRT13P40042 185 aa3.04□□□□□ -1.92
HSH49YOR319W PGU1P47180 361 aa3.04□□□□□ -1.92
HSH49YOR319W PRP24P49960 444 aaKnown RBP3.04□□□□□ -1.92
HSH49YOR319W NBP35P52920 328 aa3.04□□□□□ -1.92
HSH49YOR319W SDC1Q03323 175 aa3.04□□□□□ -1.92
HSH49YOR319W UTP15Q04305 513 aaKnown RBP3.04□□□□□ -1.92
HSH49YOR319W ARC18Q05933 178 aaKnown RBP3.04□□□□□ -1.92
HSH49YOR319W MCH1Q07376 486 aa3.04□□□□□ -1.92
HSH49YOR319W AI5_BETAQ9ZZX0 354 aa3.04□□□□□ -1.92
HSH49YOR319W PSK1P31374 1356 aa3.03□□□□□ -1.92
HSH49YOR319W CBP6P07253 162 aaPredicted RBP3.03□□□□□ -1.92
HSH49YOR319W NHP6BP11633 99 aaKnown RBP3.03□□□□□ -1.92
HSH49YOR319W TCP1P12612 559 aaKnown RBP3.03□□□□□ -1.92
HSH49YOR319W HSP26P15992 214 aaKnown RBP RIP-Chip data3.03□□□□□ -1.92not detected
HSH49YOR319W YCR025CP25352 136 aa3.03□□□□□ -1.92
HSH49YOR319W VMA6P32366 345 aaKnown RBP3.03□□□□□ -1.92
HSH49YOR319W YIL054WP40524 105 aa3.03□□□□□ -1.92
HSH49YOR319W YRB1P41920 201 aaKnown RBP3.03□□□□□ -1.92
HSH49YOR319W RPC17P47076 161 aa3.03□□□□□ -1.92
HSH49YOR319W JHD2P47156 728 aaPredicted RBP3.03□□□□□ -1.92
HSH49YOR319W YNL095CP53932 642 aa3.03□□□□□ -1.92
HSH49YOR319W YLR152CP54072 576 aa3.03□□□□□ -1.92
HSH49YOR319W YPL113CQ02961 396 aa3.03□□□□□ -1.92
HSH49YOR319W YMR244WQ04018 355 aa3.03□□□□□ -1.92
HSH49YOR319W BNA7Q04066 261 aa3.03□□□□□ -1.92
HSH49YOR319W ATG17Q06410 417 aa3.03□□□□□ -1.92
HSH49YOR319W LOA1Q06508 300 aa3.03□□□□□ -1.92
HSH49YOR319W YDL144CQ07589 356 aa3.03□□□□□ -1.92
HSH49YOR319W TMC1Q08422 150 aaPredicted RBP3.03□□□□□ -1.92
HSH49YOR319W GIS3Q12418 502 aa3.03□□□□□ -1.92
HSH49YOR319W DFM1Q12743 341 aaKnown RBP3.03□□□□□ -1.92
HSH49YOR319W YPL119C-AQ3E751 87 aa3.03□□□□□ -1.92
HSH49YOR319W YAL067W-AQ8TGK6 75 aa3.03□□□□□ -1.92
HSH49YOR319W CHD1P32657 1468 aa3.03□□□□□ -1.93
HSH49YOR319W RPL4AP10664 362 aaKnown RBP3.02□□□□□ -1.93
HSH49YOR319W PBN1P25580 416 aa3.02□□□□□ -1.93
HSH49YOR319W ZRT3P34240 503 aa3.02□□□□□ -1.93
HSH49YOR319W FZO1P38297 855 aa3.02□□□□□ -1.93
HSH49YOR319W SIP3P38717 1229 aa3.02□□□□□ -1.93
HSH49YOR319W EDC2P40023 145 aaPredicted RBP3.02□□□□□ -1.93
HSH49YOR319W COX15P40086 486 aa3.02□□□□□ -1.93
HSH49YOR319W AVT7P40501 490 aa3.02□□□□□ -1.93
HSH49YOR319W YIL012WP40551 113 aa3.02□□□□□ -1.93
HSH49YOR319W YJR079WP47126 109 aa3.02□□□□□ -1.93
HSH49YOR319W RPL4BP49626 362 aaKnown RBP3.02□□□□□ -1.93
HSH49YOR319W HAL1Q01766 294 aa3.02□□□□□ -1.93
HSH49YOR319W TSA2Q04120 196 aa3.02□□□□□ -1.93
HSH49YOR319W YPR098CQ06089 161 aa3.02□□□□□ -1.93
HSH49YOR319W DXO1Q06349 442 aa3.02□□□□□ -1.93
HSH49YOR319W DIB1Q06819 143 aaPredicted RBP3.02□□□□□ -1.93
HSH49YOR319W YCT1Q12235 531 aa3.02□□□□□ -1.93
HSH49YOR319W SNU23Q12368 194 aaPredicted RBP3.02□□□□□ -1.93
HSH49YOR319W YAL063C-AQ3E791 96 aa3.02□□□□□ -1.93
HSH49YOR319W NCB2Q92317 146 aa3.02□□□□□ -1.93
HSH49YOR319W SAC3P46674 1301 aa3.01□□□□□ -1.93
HSH49YOR319W JIP3O13555 125 aa3.01□□□□□ -1.93
HSH49YOR319W TPI1P00942 248 aaKnown RBP3.01□□□□□ -1.93
HSH49YOR319W COQ1P18900 473 aa3.01□□□□□ -1.93
HSH49YOR319W OSM1P21375 501 aaKnown RBP3.01□□□□□ -1.93
HSH49YOR319W PCL1P24867 279 aa3.01□□□□□ -1.93
HSH49YOR319W CAT2P32796 670 aaKnown RBP3.01□□□□□ -1.93
HSH49YOR319W VPS21P36017 210 aaKnown RBP3.01□□□□□ -1.93
HSH49YOR319W JEN1P36035 616 aa3.01□□□□□ -1.93
HSH49YOR319W HEK2P38199 381 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
HSH49YOR319W POP8P38208 133 aa3.01□□□□□ -1.93
HSH49YOR319W YGL118CP53132 145 aa3.01□□□□□ -1.93
HSH49YOR319W MRS2Q01926 470 aa3.01□□□□□ -1.93
HSH49YOR319W TLG1Q03322 224 aa3.01□□□□□ -1.93
HSH49YOR319W DCR2Q05924 578 aa3.01□□□□□ -1.93
HSH49YOR319W SEY1Q99287 776 aa3.01□□□□□ -1.93
HSH49YOR319W YOL085CQ99345 113 aa3.01□□□□□ -1.93
HSH49YOR319W THP2O13539 261 aaKnown RBP3□□□□□ -1.93
HSH49YOR319W POX1P13711 748 aa3□□□□□ -1.93
HSH49YOR319W PHO80P20052 293 aa3□□□□□ -1.93
HSH49YOR319W MAL32P38158 584 aa3□□□□□ -1.93
HSH49YOR319W YHI9P38765 294 aa3□□□□□ -1.93
HSH49YOR319W ASP1P38986 381 aaPredicted RBP3□□□□□ -1.93
HSH49YOR319W AVT6P40074 448 aa3□□□□□ -1.93
HSH49YOR319W UFE1P41834 346 aa3□□□□□ -1.93
HSH49YOR319W SLX9P53251 210 aaPredicted RBP3□□□□□ -1.93
HSH49YOR319W MAL12P53341 584 aa3□□□□□ -1.93
HSH49YOR319W FMP41P53889 259 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 88.3 ms