RNA–Protein interactions for RNA: YOL133W

HRT1, Transcript of RING-H2 domain core subunit of multiple ubiquitin ligase complexes, yeast

Gene HRT1, Length 366 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT1	YOL133W	NNT1	Q05874	261 aa		3.17	□□□□□ -1.9
HRT1	YOL133W	YBL112C	Q3E7Y4	105 aa		3.17	□□□□□ -1.9
HRT1	YOL133W	COX2	P00410	251 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	MET2	P08465	486 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	KRE6	P32486	720 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	RCY1	P39531	840 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	MNT4	P53745	580 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	YNL095C	P53932	642 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	YPL039W	Q03080	316 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	GMC2	Q06201	188 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	SEC10	Q06245	871 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	YLL007C	Q07799	665 aa		3.16	□□□□□ -1.9
HRT1	YOL133W	KRE1	P17260	313 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	CAT2	P32796	670 aa	Known RBP	3.15	□□□□□ -1.91
HRT1	YOL133W	HMT1	P38074	348 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	TDA11	P38854	504 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	SUR2	P38992	349 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	COA1	P40452	197 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	YAR1	P46683	200 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	KAP114	P53067	1004 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	IGO1	P53897	168 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	FCF1	Q05498	189 aa	Predicted RBP	3.15	□□□□□ -1.91
HRT1	YOL133W	FEX1	Q08913	375 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	FEX2	Q08991	375 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	YOS9	Q99220	542 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	AI5_BETA	Q9ZZX0	354 aa		3.15	□□□□□ -1.91
HRT1	YOL133W	MIG1	P27705	504 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	ICL1	P28240	557 aa	Predicted RBP	3.14	□□□□□ -1.91
HRT1	YOL133W	PEX3	P28795	441 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	HSM3	P38348	480 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	PET100	P38958	111 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	MRX5	P47007	382 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	YGL088W	P53151	121 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	MRX4	Q12467	430 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	INO80	P53115	1489 aa		3.14	□□□□□ -1.91
HRT1	YOL133W	HIS3	P06633	220 aa		3.13	□□□□□ -1.91
HRT1	YOL133W	ERG2	P32352	222 aa		3.13	□□□□□ -1.91
HRT1	YOL133W	RPT5	P33297	434 aa	Known RBP	3.13	□□□□□ -1.91
HRT1	YOL133W	PRM9	P39551	298 aa		3.13	□□□□□ -1.91
HRT1	YOL133W	BUD13	P46947	266 aa	Predicted RBP	3.13	□□□□□ -1.91
HRT1	YOL133W	COG7	P53195	279 aa		3.13	□□□□□ -1.91
HRT1	YOL133W	AGC1	Q12482	902 aa		3.13	□□□□□ -1.91
HRT1	YOL133W	NOT5	Q12514	560 aa	Predicted RBP	3.13	□□□□□ -1.91
HRT1	YOL133W	PAN1	P32521	1480 aa		3.13	□□□□□ -1.91
HRT1	YOL133W	POL30	P15873	258 aa	Known RBP	3.12	□□□□□ -1.91
HRT1	YOL133W	MET16	P18408	261 aa	Predicted RBP	3.12	□□□□□ -1.91
HRT1	YOL133W	TOM40	P23644	387 aa	Known RBP	3.12	□□□□□ -1.91
HRT1	YOL133W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
HRT1	YOL133W	ARN2	P38724	620 aa		3.12	□□□□□ -1.91
HRT1	YOL133W	SPL2	P38839	148 aa		3.12	□□□□□ -1.91
HRT1	YOL133W	MIG2	P53035	382 aa		3.12	□□□□□ -1.91
HRT1	YOL133W	DIA1	P54005	336 aa		3.12	□□□□□ -1.91
HRT1	YOL133W	YMR166C	Q03829	368 aa		3.12	□□□□□ -1.91
HRT1	YOL133W	CSG2	P35206	410 aa		3.11	□□□□□ -1.91
HRT1	YOL133W	PHO89	P38361	574 aa		3.11	□□□□□ -1.91
HRT1	YOL133W	ALG9	P53868	555 aa	Known RBP	3.11	□□□□□ -1.91
HRT1	YOL133W	ATC1	Q04005	294 aa		3.11	□□□□□ -1.91
HRT1	YOL133W	COX20	Q04935	205 aa		3.11	□□□□□ -1.91
HRT1	YOL133W	KAP95	Q06142	861 aa	Known RBP	3.11	□□□□□ -1.91
HRT1	YOL133W	TIM22	Q12328	207 aa		3.11	□□□□□ -1.91
HRT1	YOL133W	SME1	Q12330	94 aa	Predicted RBP	3.11	□□□□□ -1.91
HRT1	YOL133W	VPS1	P21576	704 aa	Known RBP	3.1	□□□□□ -1.91
HRT1	YOL133W	RSA4	P25382	515 aa	Known RBP	3.1	□□□□□ -1.91
HRT1	YOL133W	EHD3	P28817	500 aa		3.1	□□□□□ -1.91
HRT1	YOL133W	MRPL37	P36532	105 aa		3.1	□□□□□ -1.91
HRT1	YOL133W	YHL049C	P38722	271 aa		3.1	□□□□□ -1.91
HRT1	YOL133W	YHI9	P38765	294 aa		3.1	□□□□□ -1.91
HRT1	YOL133W	CTS2	Q06350	511 aa		3.1	□□□□□ -1.91
HRT1	YOL133W	RLP24	Q07915	199 aa	Known RBP	3.1	□□□□□ -1.91
HRT1	YOL133W	YMR316C-A	I2HB70	103 aa		3.09	□□□□□ -1.91
HRT1	YOL133W	RPL4A	P10664	362 aa	Known RBP	3.09	□□□□□ -1.91
HRT1	YOL133W	PIR5	P46999	287 aa		3.09	□□□□□ -1.91
HRT1	YOL133W	RPL4B	P49626	362 aa	Known RBP	3.09	□□□□□ -1.91
HRT1	YOL133W	YDR114C	Q04597	100 aa		3.09	□□□□□ -1.91
HRT1	YOL133W	CLP1	Q08685	445 aa	Predicted RBP	3.09	□□□□□ -1.91
HRT1	YOL133W	SSK22	P25390	1331 aa	Predicted RBP	3.09	□□□□□ -1.91
HRT1	YOL133W	CAM1	P29547	415 aa	Known RBP	3.08	□□□□□ -1.92
HRT1	YOL133W	DDI1	P40087	428 aa		3.08	□□□□□ -1.92
HRT1	YOL133W	RPE1	P46969	238 aa		3.08	□□□□□ -1.92
HRT1	YOL133W	YJL118W	P47022	219 aa		3.08	□□□□□ -1.92
HRT1	YOL133W	RSM27	P53305	110 aa		3.08	□□□□□ -1.92
HRT1	YOL133W	MAL13	P53338	473 aa		3.08	□□□□□ -1.92
HRT1	YOL133W	OST6	Q03723	332 aa		3.08	□□□□□ -1.92
HRT1	YOL133W	DSN1	P40568	576 aa		3.07	□□□□□ -1.92
HRT1	YOL133W	TAD2	P47058	250 aa		3.07	□□□□□ -1.92
HRT1	YOL133W	EMC2	P47133	292 aa	Known RBP	3.07	□□□□□ -1.92
HRT1	YOL133W	NBP1	P52919	319 aa	Predicted RBP	3.07	□□□□□ -1.92
HRT1	YOL133W	YOR268C	Q08734	132 aa		3.07	□□□□□ -1.92
HRT1	YOL133W	YPR096C	O13587	100 aa		3.06	□□□□□ -1.92
HRT1	YOL133W	RPL24A	P04449	155 aa	Known RBP	3.06	□□□□□ -1.92
HRT1	YOL133W	MSF1	P08425	469 aa		3.06	□□□□□ -1.92
HRT1	YOL133W	STH1	P32597	1359 aa		3.06	□□□□□ -1.92
HRT1	YOL133W	CAB3	P36076	571 aa		3.06	□□□□□ -1.92
HRT1	YOL133W	SHC1	P39000	512 aa		3.06	□□□□□ -1.92
HRT1	YOL133W	PER33	Q12144	273 aa		3.06	□□□□□ -1.92
HRT1	YOL133W	YPL247C	Q12523	523 aa		3.06	□□□□□ -1.92
HRT1	YOL133W	PPH21	P23594	369 aa		3.05	□□□□□ -1.92
HRT1	YOL133W	RRT12	P25381	491 aa		3.05	□□□□□ -1.92
HRT1	YOL133W	YHR045W	P38775	560 aa		3.05	□□□□□ -1.92
HRT1	YOL133W	AGX1	P43567	385 aa		3.05	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms