RNA–Protein interactions for RNA: YNL289W

PCL1, Transcript of Cyclin, interacts with cyclin-dependent kinase Pho85p, yeast

Gene PCL1, Length 840 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PCL1	YNL289W	ADF1	Q2V2Q1	113 aa		4.09	□□□□□ -1.75
PCL1	YNL289W	SEC16	P48415	2195 aa	Known RBP	4.09	□□□□□ -1.76
PCL1	YNL289W	RPL43A	P0CX25	92 aa	Known RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	RPL43B	P0CX26	92 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	ARF1	P11076	181 aa	Known RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	RNA1	P11745	407 aa	Known RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	ATP10	P18496	279 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	RPS1B	P23248	255 aa	Known RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	YCR100C	P25606	316 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	CDC39	P25655	2108 aa	Known RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	ATP7	P30902	174 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	YOR062C	P36025	268 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	CMC1	P36064	111 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	THI2	P38141	450 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	BIG1	P38813	335 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	APS3	P47064	194 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	PGU1	P47180	361 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	YLR460C	P54007	376 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	TPS1	Q00764	495 aa	Known RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	NCE101	Q02820	53 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	RSN1	Q03516	953 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	MIX14	Q04341	121 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	PBA1	Q05778	276 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	SSQ1	Q05931	657 aa	Predicted RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	SPO77	Q06134	477 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	RRG7	Q08774	242 aa	Predicted RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	YOR342C	Q12182	319 aa		4.08	□□□□□ -1.76
PCL1	YNL289W	PAR32	Q12515	295 aa	Known RBP	4.08	□□□□□ -1.76
PCL1	YNL289W	CTR86	P25355	563 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	RAD51	P25454	400 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	DEG1	P31115	442 aa	Known RBP	4.07	□□□□□ -1.76
PCL1	YNL289W	TFC1	P32367	649 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	YBL059W	P34224	193 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	MRPL4	P36517	319 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	NAT2	P37293	288 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	APE4	P38821	490 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	IRC6	P43615	237 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	EMC2	P47133	292 aa	Known RBP	4.07	□□□□□ -1.76
PCL1	YNL289W	RMR1	P53060	241 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	ODC1	Q03028	310 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	CGI121	Q03705	181 aa	Known RBP	4.07	□□□□□ -1.76
PCL1	YNL289W	KRE28	Q04431	385 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	REX3	Q12090	404 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	YDL211C	Q12121	372 aa		4.07	□□□□□ -1.76
PCL1	YNL289W	PFK27	Q12471	397 aa	Predicted RBP	4.07	□□□□□ -1.76
PCL1	YNL289W	FLO9	P39712	1322 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	GPH1	P06738	902 aa	Known RBP	4.06	□□□□□ -1.76
PCL1	YNL289W	KSS1	P14681	368 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	CMK2	P22517	447 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	DEP1	P31385	405 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	NSG1	P38837	291 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	HXT14	P42833	540 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	CAK1	P43568	368 aa	Predicted RBP	4.06	□□□□□ -1.76
PCL1	YNL289W	SHE4	P51534	789 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	DBP6	P53734	629 aa	Known RBP	4.06	□□□□□ -1.76
PCL1	YNL289W	PEX12	Q04370	399 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	MRPL35	Q06678	367 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	SKI7	Q08491	747 aa	Predicted RBP	4.06	□□□□□ -1.76
PCL1	YNL289W	YRA1	Q12159	226 aa	Known RBP	4.06	□□□□□ -1.76
PCL1	YNL289W	MHF2	Q3E829	80 aa		4.06	□□□□□ -1.76
PCL1	YNL289W	RPC40	P07703	335 aa	Known RBP	4.05	□□□□□ -1.76
PCL1	YNL289W	ERD1	P16151	362 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	PET9	P18239	318 aa	Known RBP	4.05	□□□□□ -1.76
PCL1	YNL289W	DBP3	P20447	523 aa	Known RBP	4.05	□□□□□ -1.76
PCL1	YNL289W	CPR4	P25334	318 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
PCL1	YNL289W	ARC19	P33204	171 aa	Known RBP	4.05	□□□□□ -1.76
PCL1	YNL289W	YCR041W	P37265	110 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	YGR201C	P42936	225 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	YFL067W	P43537	175 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	YGR149W	P48236	432 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	LSG1	P53145	640 aa	Known RBP	4.05	□□□□□ -1.76
PCL1	YNL289W	YGR016W	P53209	190 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	YNR068C	P53754	272 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	YNL095C	P53932	642 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	RNH202	Q05635	350 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	RRT8	Q08219	342 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	YLR126C	Q12288	251 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	MRX4	Q12467	430 aa		4.05	□□□□□ -1.76
PCL1	YNL289W	HHF1	P02309	103 aa	Known RBP	4.04	□□□□□ -1.76
PCL1	YNL289W	YFR010W-A	P0C5N0	62 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	YAK1	P14680	807 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	ERD2	P18414	219 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	GRR1	P24814	1151 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	RHB1	P25378	209 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	PBN1	P25580	416 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	AFG1	P32317	509 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	YEL045C	P32616	141 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	MDL1	P33310	695 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	RRP4	P38792	359 aa	Known RBP	4.04	□□□□□ -1.76
PCL1	YNL289W	PRE5	P40302	234 aa	Known RBP	4.04	□□□□□ -1.76
PCL1	YNL289W	NAS2	P40555	220 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	OST1	P41543	476 aa	Known RBP	4.04	□□□□□ -1.76
PCL1	YNL289W	TOM22	P49334	152 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	MPC1	P53157	130 aa	Known RBP	4.04	□□□□□ -1.76
PCL1	YNL289W	PDR16	P53860	351 aa	Known RBP	4.04	□□□□□ -1.76
PCL1	YNL289W	ADD37	Q03233	198 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	SNX41	Q04053	625 aa		4.04	□□□□□ -1.76
PCL1	YNL289W	ERB1	Q04660	807 aa	Known RBP	4.04	□□□□□ -1.76
PCL1	YNL289W	DCR2	Q05924	578 aa		4.04	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 87.6 ms