RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	NPT1	P39683	429 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	YER084W	P40057	128 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	COG3	P40094	801 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	TIF34	P40217	347 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	AYR1	P40471	297 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	DSN1	P40568	576 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	GON7	P46984	123 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	SNX4	P47057	423 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	DAN1	P47178	298 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	GTO1	P48239	356 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	RPL9B	P51401	191 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	MND1	P53102	219 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	TPC1	P53257	314 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	VOA1	P53262	265 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YGR219W	P53307	113 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	CPD1	P53314	239 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YNL143C	P53908	130 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	SPP2	Q02521	185 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	EBS1	Q03466	884 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	SCS7	Q03529	384 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	ECM18	Q04623	453 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	ATO3	Q12359	275 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	ERP4	Q12450	207 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	FRE6	Q12473	712 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	FKS1	P38631	1876 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	GAL7	P08431	366 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	MRP1	P10662	321 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	DPM1	P14020	267 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	PET18	P25362	215 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	CSM1	P25651	190 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	SCM4	P32564	187 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	DOA4	P32571	926 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	GDH2	P33327	1092 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	BLI1	P35727	113 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	MCH2	P36032	473 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	LAS1	P36146	502 aa	Predicted RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	MRPL39	P36533	70 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YSW1	P38280	609 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	FZO1	P38297	855 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	COS8	P38723	381 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	LRP1	P38801	184 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	AVT7	P40501	490 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	INA22	P40576	216 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YJL027C	P47063	138 aa	Predicted RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	UBC13	P52490	153 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	RSC1	P53236	928 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	DBP6	P53734	629 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	BUD25	P85052	153 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	UTP6	Q02354	440 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	VPS60	Q03390	229 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	GOT1	Q03554	138 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	PEX12	Q04370	399 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	BOP2	Q06150	570 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	CTR3	Q06686	241 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	0.17	□□□□□ -2.38	not detected
RCO1	YMR075W	YOL019W	Q08157	551 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	VPS68	Q12016	184 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YPL162C	Q12042	273 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	DCN1	Q12395	269 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	AIM45	Q12480	344 aa	Known RBP	0.17	□□□□□ -2.38
RCO1	YMR075W	SKS1	Q12505	502 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	YPL247C	Q12523	523 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	AI5_BETA	Q9ZZX0	354 aa		0.17	□□□□□ -2.38
RCO1	YMR075W	RPS3	P05750	240 aa	Known RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	CAR2	P07991	424 aa	Known RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	GCD2	P12754	651 aa	Predicted RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	GAL3	P13045	520 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	CDC42	P19073	191 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	FPR1	P20081	114 aa	Known RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	YSR3	P23501	404 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	PEX3	P28795	441 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	PEX4	P29340	183 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	0.16	□□□□□ -2.38	not detected
RCO1	YMR075W	AEP1	P32493	518 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	IMP3	P32899	183 aa	Predicted RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	SPT4	P32914	102 aa	Predicted RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	RPC25	P35718	212 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	RCN1	P36054	211 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	RPC37	P36121	282 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	ECM4	P36156	370 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	POP8	P38208	133 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	PET8	P38921	284 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	RPL13B	P40212	199 aa	Known RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	PGD1	P40356	397 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	ARC15	P40518	154 aa	RIP-Chip data	0.16	□□□□□ -2.38	not detected
RCO1	YMR075W	YIL001W	P40560	513 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	GDS1	P41913	522 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	OST2	P46964	130 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	MPP10	P47083	593 aa	Known RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	YPT32	P51996	222 aa	Known RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	OKP1	P53298	406 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	SAY1	P53324	424 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	YNL260C	P53846	198 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	YML108W	Q03759	105 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	YMR114C	Q04471	368 aa	Known RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	YDR124W	Q04608	324 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	SSQ1	Q05931	657 aa	Predicted RBP	0.16	□□□□□ -2.38
RCO1	YMR075W	STE23	Q06010	1027 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	SEC10	Q06245	871 aa		0.16	□□□□□ -2.38
RCO1	YMR075W	BCP1	Q06338	283 aa		0.16	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms